FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: AAPK2_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Caenorhabditis elegans GN=aak-2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 42/145 (28.97%), Postives = 75/145 (51.72%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDY--NELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLP 480
            I E  + G L +Y  K+ R+     + + +QI+ G+ Y H H   V+HRDLK +N+ ++     +KI D GL+ I+       +  G+P + APE+          VD++S G+ +  +L    P+ +   P+ +++K+ SG  P
Sbjct:  163 IMEHVSGGELFDYIVKHGRLKTAEARRFFQQIISGVDYCHRH--MVVHRDLKPENLLLDEQ-NNVKIADFGLSNIMTDGDFLRTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDEHVPS-LFRKIKSGVFP 303          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STK39_RAT (STE20/SPS1-related proline-alanine-rich protein kinase OS=Rattus norvegicus GN=Stk39 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  139 RQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG------SQQAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK--------CLE-NVSKRLPAKELLLDPFLASDAGEPLLIPQV 630
            +++L G+ YLH +    IHRDLK  NI + G  G ++I D G++A L        ++   + +GTP +MAPE+ E+   Y+   D++SFG+  +E+ T   PY +   P ++         P     ++D E  +  GK        CL+ + SKR  A ELL   F         LI ++
Sbjct:  183 KEVLEGLDYLHRNGQ--IHRDLKAGNILL-GEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKL 359          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STK39_MOUSE (STE20/SPS1-related proline-alanine-rich protein kinase OS=Mus musculus GN=Stk39 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  139 RQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG------SQQAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK--------CLE-NVSKRLPAKELLLDPFLASDAGEPLLIPQV 630
            +++L G+ YLH +    IHRDLK  NI + G  G ++I D G++A L        ++   + +GTP +MAPE+ E+   Y+   D++SFG+  +E+ T   PY +   P ++         P     ++D E  +  GK        CL+ + SKR  A ELL   F         LI ++
Sbjct:  186 KEVLEGLDYLHRNGQ--IHRDLKAGNILL-GEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKL 362          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STK39_HUMAN (STE20/SPS1-related proline-alanine-rich protein kinase OS=Homo sapiens GN=STK39 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  139 RQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG------SQQAHSVIGTPEFMAPELYEE--DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGK--------CLE-NVSKRLPAKELLLDPFLASDAGEPLLIPQV 630
            +++L G+ YLH +    IHRDLK  NI + G  G ++I D G++A L        ++   + +GTP +MAPE+ E+   Y+   D++SFG+  +E+ T   PY +   P ++         P     ++D E  +  GK        CL+ + SKR  A ELL   F         LI ++
Sbjct:  176 KEVLEGLDYLHRNGQ--IHRDLKAGNILL-GEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKL 352          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: SCK1_SCHPO (Serine/threonine-protein kinase sck1 OS=Schizosaccharomyces pombe GN=sck1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 60/190 (31.58%), Postives = 97/190 (51.05%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA-AILRGSQQAHSVIGTPEFMAPELYEED--YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHR-IQDAEARRFV-GKCLENVSKRLPA----KELLLDPFLA 594
            IT+  + G L  + +   R   +  K +  +++  + +LH HD  +I+RDLK +NI ++   G I + D GL+ A L  +   ++  GT E++APE+  ED  Y + VD +S G+ V EM     P+    +  Q+Y+ +  GK+   F + +  +E R FV G    N + RL A     EL   PF A
Sbjct:  381 ITDYMSGGELFWHLQHEGRFPEQRAKFYIAELVLALEHLHKHD--IIYRDLKPENILLDAD-GHIALCDFGLSKANLSANATTNTFCGTTEYLAPEVLLEDKGYTKQVDFWSLGVLVFEMCCGWSPF-YAPDVQQMYRNIAFGKV--RFPKGVLSSEGRSFVRGLLNRNPNHRLGAVADTTELKEHPFFA 564          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: SAMKB_DICDI (Probable serine/threonine-protein kinase samkB OS=Dictyostelium discoideum GN=samkB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 1
Query:  124 VKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-LRGSQQAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSDYPY 423
            V+N +++IL  I YLH  +PP++HRD+K DNI +N     I + D GL+ + +  +    +   +P + APE+  +   D++   DIYSFG  +LEM+    P+
Sbjct:  288 VRNISKKILNAIDYLHSSNPPIVHRDIKGDNILLNDSDEPI-LADFGLSYLAIENNTNFKTACCSPFWAAPEILNKSTSDFSRKCDIYSFGCTILEMIVGSDPW 390          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: ROCO6_DICDI (Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum GN=roco6 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 44/142 (30.99%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   43 FNFITEMFTSGTLREYRKKYTRVDIRAVKNWAR------QILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLG--QIKIGDLGLAAILRGSQQAHSV----IGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSE 429
            F  + E    G L ++   ++ +  +   NWA        I +G+ +LH   PP++HRDLK  N+ ++   G    K+GD GL++ +      H +    +G   ++APE L EE+Y    D+Y+FG+ + E+LT  +PY E
Sbjct: 1425 FTMVMEYIDCGDLHKFL--HSPIGDQLNGNWALILKLALDIAKGMEFLHSVTPPLLHRDLKSPNVLLSMKDGVYTAKVGDFGLSSRMFIQALKHKLRNFPVGNITWVAPEILREEEYTVKSDVYAFGLILHELLTRKHPYRE 1564          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PPK11_SCHPO (Serine/threonine-protein kinase ppk11 OS=Schizosaccharomyces pombe GN=ppk11 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 62/232 (26.72%), Postives = 99/232 (42.67%), Query Frame = 1
Query:    4 RFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL-ENVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQNLNPNGAVMELVPKFA 690
            ++YAS++D  R       E    G+  +  K       R +    RQ+L  + YLHG     +HRD+K  NI      G +K+ D G++  L   +  +   +GTP +MAPE+ ++  YN   DI+S G+   E+ T + PYS   +P ++   +     P             FV  CL +N   R  A+ L    F+                +   PN +V E+V  +A
Sbjct:   66 KYYASFVDGFRLWITM--EYCDGGSCLDLLKLSGTFSERVIAEVMRQVLEALVYLHGQGK--MHRDIKAANILTMKD-GLVKLADFGVSGQLESLRDKNDDFVGTPFWMAPEVVKQTGYNYKADIWSLGITAYELATGEPPYSGI-HPMKVLLLIPKHSPPSLERSKFSRAFCDFVSNCLKKNPKDRATAEYLSKHKFI----------------KKYCPNTSVKEVVASYA 275          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PLK3_HUMAN (Serine/threonine-protein kinase PLK3 OS=Homo sapiens GN=PLK3 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 1
Query:  124 VKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVI-GTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYK 456
            V+ + RQIL G+ YLH     ++HRDLK  N F+  ++ ++K+GD GLAA L   +Q    I GTP ++APE L  + +    D++S G CV+  L    P  E ++  + Y+
Sbjct:  162 VRYYLRQILSGLKYLHQRG--ILHRDLKLGNFFITENM-ELKVGDFGLAARLEPPEQRKKTICGTPNYVAPEVLLRQGHGPEADVWSLG-CVMYTLLCGSPPFETADLKETYR 270          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M4K1_HUMAN (Mitogen-activated protein kinase kinase kinase kinase 1 OS=Homo sapiens GN=MAP4K1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 50/163 (30.67%), Postives = 78/163 (47.85%), Query Frame = 1
Query:  139 RQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH-SVIGTPEFMAPEL----YEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHR--IQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAG 606
            R++L+G+AYLH      IHRD+K  NI +N   G++++ D G++A +  +     S IGTP +MAPE+     +  YNEL DI+S G+  +E+     P  +      ++    SG  P          A    F+   L    K+ P+   +L   L S  G
Sbjct:  119 REVLQGLAYLHSQKK--IHRDIKGANILIND-AGEVRLADFGISAQIGATLARRLSFIGTPYWMAPEVAAVALKGGYNELCDIWSLGITAIELAELQPPLFDVHPLRVLFLMTKSGYQPPRLKEKGKWSAAFHNFIKVTLTKSPKKRPSATKMLSHQLVSQPG 278          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
AAPK2_CAEEL3.132e-1128.975'-AMP-activated protein kinase catalytic subunit ... [more]
STK39_RAT4.090e-1130.39STE20/SPS1-related proline-alanine-rich protein ki... [more]
STK39_MOUSE4.090e-1130.39STE20/SPS1-related proline-alanine-rich protein ki... [more]
STK39_HUMAN4.090e-1130.39STE20/SPS1-related proline-alanine-rich protein ki... [more]
SCK1_SCHPO4.090e-1131.58Serine/threonine-protein kinase sck1 OS=Schizosacc... [more]
SAMKB_DICDI4.090e-1135.58Probable serine/threonine-protein kinase samkB OS=... [more]
ROCO6_DICDI4.090e-1130.99Probable serine/threonine-protein kinase roco6 OS=... [more]
PPK11_SCHPO4.090e-1126.72Serine/threonine-protein kinase ppk11 OS=Schizosac... [more]
PLK3_HUMAN4.090e-1137.17Serine/threonine-protein kinase PLK3 OS=Homo sapie... [more]
M4K1_HUMAN4.090e-1130.67Mitogen-activated protein kinase kinase kinase kin... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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