FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 43/131 (32.82%), Postives = 75/131 (57.25%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNW------ARQILRGIAYLH-GHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAH---SVIGTPEFMAPELYEEDY-NELVDIYSFGMCVLEMLTS 411
            I E  ++G L+++    +  + R+  +W      A +  +G+ YLH G  PP+IHRD+K  NI ++ +  Q K+GD GL+       + H   +V G+P ++ PE Y  ++  E  D++SFG+ +LE++TS
Sbjct:  663 IYEYMSNGNLKQH---LSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNF-QAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITS 789          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: TRIO_DANRE (Triple functional domain protein OS=Danio rerio GN=trio PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 57/199 (28.64%), Postives = 90/199 (45.23%), Query Frame = 1
Query:   40 TFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQ--IKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNEL-VDIYSFGMCVLEMLTSDYPYSE------CSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAG 606
            ++  + EM   G L +Y   +  +    V  + R IL  + YLH  +  ++H DLK +N+ V     Q  +K+ D G A  L  +   H ++G+PEF APEL   D   L  D++S G+    ML+   P+ +      C N  ++         P  + +     AR F+   L    SKR PA   L +P+L +  G
Sbjct: 2794 SYALVLEMSDQGRLLDYIVSWGNLTEEKVAFYLRDILEALQYLH--NCRIVHLDLKPENLVVEQSPSQPLVKLTDFGDAVQLNSTPYVHPLLGSPEFAAPELVLGDPVSLSSDLWSLGVLTYVMLSGASPFLDESVEETCLNICRL-----DFSFPDDYFQGVSQAARDFMCLLLRMEPSKRPPATSCLQEPWLRAGGG 2985          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STK25_MOUSE (Serine/threonine-protein kinase 25 OS=Mus musculus GN=Stk25 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 48/154 (31.17%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  139 RQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQ-QAHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFL 591
            R+IL+G+ YLH      IHRD+K  N+ ++   G +K+ D G+A  L  +Q + ++ +GTP +MAPE+ ++  Y+   DI+S G+  +E+   + P S+  +P ++   +     P           + FV  CL    +  P AKELL   F+
Sbjct:  122 REILKGLDYLHSERK--IHRDIKAANVLLSEQ-GDVKMADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL-HPMRVLFLIPKNN-PPTLEGHHSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 270          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K7_DROME (Mitogen-activated protein kinase kinase kinase 7 OS=Drosophila melanogaster GN=Tak1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 1
Query:  130 NWARQILRGIAYLHGHDP-PVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLP 480
            +WARQ   G+AYLH   P P+IHRD+K  N+ +      +KI D G  A    S    +  G+  +MAPE++E   Y E  DI+S+ + + E+L+   P+    N   I  K+  G+ P
Sbjct:  116 SWARQCAEGLAYLHAMTPKPLIHRDVKPLNLLLTNKGRNLKICDFGTVA--DKSTMMTNNRGSAAWMAPEVFEGSKYTEKCDIFSWAIVLWEVLSRKQPFKGIDNAYTIQWKIYKGERP 232          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KCC2D_RAT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus GN=Camk2d PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 56/192 (29.17%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   43 FNFIT--EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            F+ +T  E+F     REY   Y+  D     +  +QIL  + + H +   ++HRDLK +N+ +        +K+ D GLA  ++G QQA     GTP +++PE+  +D Y + VD+++ G+ +L +L   YP     +  ++Y+++ +G    P         EA+  + K L  N +KR+ A E L  P++
Sbjct:   90 FDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 272          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KCC2D_PIG (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Sus scrofa GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 56/192 (29.17%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   43 FNFIT--EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            F+ +T  E+F     REY   Y+  D     +  +QIL  + + H +   ++HRDLK +N+ +        +K+ D GLA  ++G QQA     GTP +++PE+  +D Y + VD+++ G+ +L +L   YP     +  ++Y+++ +G    P         EA+  + K L  N +KR+ A E L  P++
Sbjct:   90 FDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 272          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KCC2D_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus GN=Camk2d PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 56/192 (29.17%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   43 FNFIT--EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            F+ +T  E+F     REY   Y+  D     +  +QIL  + + H +   ++HRDLK +N+ +        +K+ D GLA  ++G QQA     GTP +++PE+  +D Y + VD+++ G+ +L +L   YP     +  ++Y+++ +G    P         EA+  + K L  N +KR+ A E L  P++
Sbjct:   90 FDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 272          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KCC2D_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Homo sapiens GN=CAMK2D PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 56/192 (29.17%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   43 FNFIT--EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            F+ +T  E+F     REY   Y+  D     +  +QIL  + + H +   ++HRDLK +N+ +        +K+ D GLA  ++G QQA     GTP +++PE+  +D Y + VD+++ G+ +L +L   YP     +  ++Y+++ +G    P         EA+  + K L  N +KR+ A E L  P++
Sbjct:   90 FDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 272          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KCC2D_CHICK (Calcium/calmodulin-dependent protein kinase type II delta chain OS=Gallus gallus GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 56/192 (29.17%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   43 FNFIT--EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            F+ +T  E+F     REY   Y+  D     +  +QIL  + + H +   ++HRDLK +N+ +        +K+ D GLA  ++G QQA     GTP +++PE+  +D Y + VD+++ G+ +L +L   YP     +  ++Y+++ +G    P         EA+  + K L  N +KR+ A E L  P++
Sbjct:   90 FDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 272          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KCC2D_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Bos taurus GN=CAMK2D PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 56/192 (29.17%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   43 FNFIT--EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            F+ +T  E+F     REY   Y+  D     +  +QIL  + + H +   ++HRDLK +N+ +        +K+ D GLA  ++G QQA     GTP +++PE+  +D Y + VD+++ G+ +L +L   YP     +  ++Y+++ +G    P         EA+  + K L  N +KR+ A E L  P++
Sbjct:   90 FDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILESVNHCHLNG--IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 272          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
Y4245_ARATH6.977e-1132.82Probable LRR receptor-like serine/threonine-protei... [more]
TRIO_DANRE6.977e-1128.64Triple functional domain protein OS=Danio rerio GN... [more]
STK25_MOUSE6.977e-1131.17Serine/threonine-protein kinase 25 OS=Mus musculus... [more]
M3K7_DROME6.977e-1135.29Mitogen-activated protein kinase kinase kinase 7 O... [more]
KCC2D_RAT6.977e-1129.17Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_PIG6.977e-1129.17Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_MOUSE6.977e-1129.17Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_HUMAN6.977e-1129.17Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_CHICK6.977e-1129.17Calcium/calmodulin-dependent protein kinase type I... [more]
KCC2D_BOVIN6.977e-1129.17Calcium/calmodulin-dependent protein kinase type I... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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