FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK2_DICDI (Probable serine/threonine-protein kinase nek2 OS=Dictyostelium discoideum GN=nek2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.111e-16
Identity = 57/164 (34.76%), Postives = 87/164 (53.05%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKY----TRVDIRAVKNWARQILRGIAYLHGH-DPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGK 474
            +R+Y   ID        I E  + G L +  KK     T +D   +     QIL  +  +H   D  ++HRD+K  N+F++ +   IK+GD GLA IL  S  AH+ +GTP +M+PE ++   YNE  D++S G  + EM T   P+ E +N AQ+  K+  G+
Sbjct:   64 VRYYDRIIDKPSSRLYIIMEHCSGGDLSQLIKKCRNERTYMDEEVIWRTLLQILSALQEIHNRKDGVILHRDIKPGNLFLDENKN-IKLGDFGLAKILNESLYAHTFVGTPYYMSPEQIHGLKYNERSDVWSVGCLIYEMATLSPPF-EATNQAQLTSKIQVGR 225          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K6_HUMAN (Mitogen-activated protein kinase kinase kinase 6 OS=Homo sapiens GN=MAP3K6 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.111e-16
Identity = 56/158 (35.44%), Postives = 85/158 (53.80%), Query Frame = 1
Query:  133 WARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + RQIL+G+ YLH  D  ++HRD+K DN+ +N   G +KI D G +  L G +    +  GT ++MAPE+ ++    Y +  DI+S G  V+EM T   P+ E  +P     +V   K+         AEA+ F+ +  E +   R  A+ LL DPFL
Sbjct:  751 YTRQILQGLGYLH--DNHIVHRDIKGDNVLINTFSGLLKISDFGTSKRLAGITPCTETFTGTLQYMAPEIIDQGPRGYGKAADIWSLGCTVIEMATGRPPFHELGSPQAAMFQVGMYKVHPPMPSSLSAEAQAFLLRTFEPDPRLRASAQTLLGDPFL 906          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16
Identity = 58/184 (31.52%), Postives = 96/184 (52.17%), Query Frame = 1
Query:   58 EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA-ILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL-ENVSKRLPAKELLLDPFLASD 600
            E   +G+L      +       + N+   +L+G+ YLH     VIHRD+K  NI +N   G+ K+ D G A  I++ S + +SV+GTP +MAPE+ E   + ++ DI+S G  ++E+ TS  PY +  NP     ++     P     I  +E   F+ +C  ++  +R  AKELL  P++  +
Sbjct:  154 EYMENGSLSTILNNFGTFPESLICNYVENVLKGLVYLHQEG--VIHRDIKAANILIN-KAGEAKLSDFGTAGEIIKESDKRYSVVGTPYWMAPEVIEISGHCQVSDIWSLGCTIIELFTSYPPYFDL-NPLGAMYRICQDDRPPLPDDI-SSELANFLERCFCKSTEERATAKELLSHPWITKN 332          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAKC_DICDI (Serine/threonine-protein kinase pakC OS=Dictyostelium discoideum GN=pakC PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.476e-16
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVK--NWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPF--LASDAGE 609
            + +  S+I  DR  +    E    G L +  + +  + +  ++     ++ L+ + Y+H      IHRD+K DNI + G  G +KI D G AA L   QQ  ++V+GTP +MAPEL    DY   VDI+S G+ ++EM   + PY +      ++   T G  P           + F  KCL+ NV+ R  A +LL  PF  LA D+ E
Sbjct:  277 VNYIDSYIVNDRELW-VAMEFMGGGCLTDILEAFDNIKMSEIQIAYVVKETLKALQYIHSLHR--IHRDIKSDNILL-GSEGSVKIADFGYAAQLTQKQQKRNTVVGTPYWMAPELIRGHDYGVKVDIWSLGIMMMEMAEGEPPYMDFPPLRALFLITTKGIPPLKETTKWSKTFQDFFSKCLDINVANRPDATDLLKHPFMDLACDSSE 482          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAYO (Calcium-dependent protein kinase 1 OS=Plasmodium yoelii yoelii GN=CPK1 PE=3 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 2.476e-16
Identity = 63/188 (33.51%), Postives = 96/188 (51.06%), Query Frame = 1
Query:   31 DRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGH--LGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFH---RIQDAEARRFVGKCLE-NVSKRLPAKELL 576
            D++ F  +TE +  G L E      + D     N  +QIL GI YLH H+  ++HRD+K +NI +     L  IKI D GL++      +    +GT  ++APE+ ++ YNE  D++S G+ ++ +L   YP     N   I KKV  GK    F+    I D EA+  +   L  + +KR  A+E L
Sbjct:  136 DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGV-IMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISD-EAKELIKLMLTYDYNKRCTAEEAL 319          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK6_ARATH (Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana GN=NEK6 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16
Identity = 66/221 (29.86%), Postives = 98/221 (44.34%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVK--NWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQNLNP 654
            + +  SW++ D      +T     G + +  KK   V     K   W  Q+L  I YLH +   V+HRDLKC NIF+     ++++GD GLA +L     A S++GTP +M PEL  +  Y    DI+S G C+ E + +  P  +  + A +  K+    L         +  R       +N   R  A ELL  P L          P +   QNL+P
Sbjct:   64 VEYKDSWVEKD--CVCIVTSYCEGGDMTQMIKKSRGVFASEEKLCRWMVQLLLAIDYLHNNR--VLHRDLKCSNIFLTKE-NEVRLGDFGLAKLLGKDDLASSMVGTPNYMCPELLADIPYGYKSDIWSLGCCMFE-VAAHQPAFKAPDMAALINKINRSSLSPLPVMYSSSLKRLIKSMLRKNPEHRPTAAELLRHPHLQ---------PYLAQCQNLSP 269          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16
Identity = 61/189 (32.28%), Postives = 96/189 (50.79%), Query Frame = 1
Query:   40 TFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA---AILRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFL 591
            T N + E    G++    +K+       V+ + RQ+L G+ YLH H   ++HRD+K  NI V+ + G IK+ D G +   A L     A S+ GTP +MAPE + +  ++   DI+S G  V+EM+T   P+S+          + + K          ++A+ F+ KCL+ V    P A ELL  PF+
Sbjct:  146 TLNILLEFVPGGSISSLLEKFGPFPESVVRTYTRQLLLGLEYLHNH--AIMHRDIKGANILVD-NKGCIKLADFGASKQVAELATMTGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPDTLSSDAKDFLLKCLQEVPNLRPTASELLKHPFV 331          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: ZYG1_CAEBR (Probable serine/threonine-protein kinase zyg-1 OS=Caenorhabditis briggsae GN=zyg-1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16
Identity = 54/206 (26.21%), Postives = 104/206 (50.49%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQ---IKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGE 609
            ++FY ++ + +  T+  + E+   G+L +Y K+   +D     +  RQ++  + Y+H  D  ++HRDL   N+F+         +K+GD GLA  L     A +++GTP F+AP+++ ++Y++  D+YS G  +  MLT   P ++     +  KK  +        R+   +ARR           R+  KE+++  ++ +  GE
Sbjct:   68 VQFYETFFE-NGETY-LVMELCEGGSLMDYVKQKGPLDDSTAVHILRQLIAAVKYIH--DENILHRDLSAGNVFIKDATKSTITVKLGDFGLATNLGQHGTACTIVGTPGFIAPQVFGQNYDQAADVYSLGAVLYTMLTKHTPPTKGPPNLESLKK-RNPSAADLVERMMHTDARR-----------RIQLKEIVMTDYVKAKMGE 257          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK2_RAT (Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus GN=Pak2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 63/188 (33.51%), Postives = 98/188 (52.13%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA-----RRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DN+ + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY    NP +    + +   P     +Q+ E      R F+ +CLE +V KR  AKELL  PFL
Sbjct:  322 VMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLL-GMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 500          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK2_RABIT (Serine/threonine-protein kinase PAK 2 OS=Oryctolagus cuniculus GN=PAK2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 63/188 (33.51%), Postives = 98/188 (52.13%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA-----RRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DN+ + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY    NP +    + +   P     +Q+ E      R F+ +CLE +V KR  AKELL  PFL
Sbjct:  322 VMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLL-GMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 500          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
NEK2_DICDI1.111e-1634.76Probable serine/threonine-protein kinase nek2 OS=D... [more]
M3K6_HUMAN1.111e-1635.44Mitogen-activated protein kinase kinase kinase 6 O... [more]
Y0146_DICDI1.451e-1631.52Probable serine/threonine-protein kinase DDB_G0270... [more]
PAKC_DICDI2.476e-1632.38Serine/threonine-protein kinase pakC OS=Dictyostel... [more]
CDPK1_PLAYO2.476e-1633.51Calcium-dependent protein kinase 1 OS=Plasmodium y... [more]
NEK6_ARATH4.223e-1629.86Serine/threonine-protein kinase Nek6 OS=Arabidopsi... [more]
ANP1_ARATH4.223e-1632.28Mitogen-activated protein kinase kinase kinase ANP... [more]
ZYG1_CAEBR5.515e-1626.21Probable serine/threonine-protein kinase zyg-1 OS=... [more]
PAK2_RAT7.203e-1633.51Serine/threonine-protein kinase PAK 2 OS=Rattus no... [more]
PAK2_RABIT7.203e-1633.51Serine/threonine-protein kinase PAK 2 OS=Oryctolag... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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