FC930992

Overview
NameFC930992
Unique NameFC930992
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: Y286_HAEIN (Uncharacterized aminotransferase HI0286 OS=Haemophilus influenzae GN=HI0286 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15
Identity = 57/182 (31.32%), Postives = 90/182 (49.45%), Query Frame = 3
Query:  174 EKDKRPVIHLGHGDPSAFPCFRTSTVAEDAVVDALRTA-HYNCYSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIV 716
            E++   ++ L  G+P+ F         ++ +VD LR       Y  + G+ SAR+ I  Y         +  DVY+  G S+ I +++  L   G  +L+P P YPL+   AA + +  +A HY       W   +D ++A  +  T AIVIINP NP G V+S + LQ+I   AR   +I+
Sbjct:   29 EEEGNKILKLNIGNPAPFGF----EAPDEILVDVLRNLPSAQGYCDSKGLYSARKAIVQYYQSKGILGATVNDVYIGNGVSELITMAMQALLNDGDEVLVPMPDYPLWT--AAVTLSGGKAVHYLCDEDANWFPTIDDIKAKVNAKTKAIVIINPNNPTGAVYSKELLQEIVEIARQNNLII 204          
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: ALAT_YEAST (Probable alanine aminotransferase OS=Saccharomyces cerevisiae GN=ALT2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 61/204 (29.90%), Postives = 97/204 (47.55%), Query Frame = 3
Query:  147 LTSLKENLNEKDKRPVIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAH-----YNCYSPTFGVPSARRGIADYLNR-DLPYKLSPEDVYLTLGCSQAIEISLSVLARPG-ANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVM 719
            LT  ++ L   +   ++ +GH + ++   F     + DA+  A R  +        YS + GVP  R+ +AD++ R D     +PED+YLT G S A    LS+L +     +LIP P YPLY   A+ S  N +   Y L     W  + D +E +  +          +++INPGNP G V S + + +I   A   GI ++
Sbjct:   85 LTFTRQVLAILEYPEILRVGHNELASLNLF-----SRDALERAERLLNDIGGSIGAYSHSQGVPGIRQTVADFITRRDGGEPATPEDIYLTTGASSAATSLLSLLCKDSQTGLLIPIPQYPLYT--ASASLFNAQVLPYYLDEESNWSTNSDEIEKVVQDALKKQIRPSVLIVINPGNPTGAVLSEETIARICLIAAKYGITII 281          
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: ALAM_YEAST (Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 3
Query:  300 YSPTFGVPSARRGIADYLNRDLPYKLS-PEDVYLTLGCSQAIEISLSVLAR-PGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADE------NTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVM 719
            YS + GV   R+ +A+++ +    ++S PED++LT G S A+   LS+  R P   +LIP P YPLY   A  + NN +A  Y L     W  + + +E +  E          +V+INPGNP G V S + + +I   A   G +V+
Sbjct:  221 YSSSQGVEGIRKSVAEFITKRDEGEISYPEDIFLTAGASAAVNYLLSIFCRGPETGVLIPIPQYPLYT--ATLALNNSQALPYYLDENSGWSTNPEEIETVVKEAIQNEIKPTVLVVINPGNPTGAVLSPESIAQIFEVAAKYGTVVI 366          
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: YUGH_BACSU (Putative aminotransferase yugH OS=Bacillus subtilis GN=yugH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14
Identity = 55/179 (30.73%), Postives = 90/179 (50.28%), Query Frame = 3
Query:  192 VIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYKLSPE-DVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYE--IHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVM 719
            VI LG G+P     F T+    +A + +L    Y  Y+   G+ S R  I+ YL+       SP+ ++ +T+G SQA++I++  +  PG  ++IP P +  Y+  +  AG        H      K ++      EA   E T AI+I +P NP G+V+S + L +IA  A+   +IV+
Sbjct:   30 VISLGVGEPD----FVTAWNVREASILSLEQG-YTSYTANAGLYSLREEISRYLSNRFDLSYSPDNELIVTVGASQALDIAIRAIVNPGEEVIIPEPCFVAYDALVSLAGGI----PVHVHTTADKGFKATAADFEAAVTEKTKAILICSPSNPTGSVYSKEELNEIAEFAKKHDVIVL 199          
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: AAT_STRVG (Aspartate aminotransferase OS=Streptomyces virginiae GN=aspC PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 53/182 (29.12%), Postives = 86/182 (47.25%), Query Frame = 3
Query:  186 RPVIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLY--EIHAAGSNNNLEARHYDLLPGKC--WEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVM 719
            RPVI  G G+P     F T     +A V+A R   Y+ Y+P  G+P  +  IA    RD  Y++    V +T G  QAI  + + +  PG  +++P P +  Y   I  AG          D++  +   + V ++ +EA   E T  ++ ++P NP G+V+S    + I   A   G+ V+
Sbjct:   28 RPVIGFGAGEPD----FPTPDYIVEAAVEACRNPKYHRYTPAGGLPELKAAIAAKTLRDSGYEVEASQVLVTNGGKQAIYEAFAAILDPGDEVIVPAPYWTTYPESIRLAG------GVPVDVVADETTGYRVSVEQLEAARTERTKVVLFVSPSNPTGSVYSEADAKAIGEWAAEHGLWVL 199          
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: AAT_MYCTU (Probable aspartate aminotransferase OS=Mycobacterium tuberculosis GN=aspC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 58/189 (30.69%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  174 EKDKRPVIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYKLSP-------EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVM 719
            E +   ++ L  G+P+ F       +  D ++ AL  A    YS + G+ SARR +         Y+L P       +DVYL  G S+ I ++L  L   G  +LIP P YPL+   A+ S       HY     + W+ D+  +E+   E T A+V+INP NP G V+S + L ++   AR   ++++
Sbjct:   53 EAEGHRILKLNIGNPAPFGFEAPDVIMRD-IIQALPYAQG--YSDSQGILSARRAVVTR------YELVPGFPRFDVDDVYLGNGVSELITMTLQALLDNGDQVLIPSPDYPLWT--ASTSLAGGTPVHYLCDETQGWQPDIADLESKITERTKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLL 230          
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: AAT_MYCBO (Probable aspartate aminotransferase OS=Mycobacterium bovis GN=aspC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 58/189 (30.69%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  174 EKDKRPVIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYKLSP-------EDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVM 719
            E +   ++ L  G+P+ F       +  D ++ AL  A    YS + G+ SARR +         Y+L P       +DVYL  G S+ I ++L  L   G  +LIP P YPL+   A+ S       HY     + W+ D+  +E+   E T A+V+INP NP G V+S + L ++   AR   ++++
Sbjct:   53 EAEGHRILKLNIGNPAPFGFEAPDVIMRD-IIQALPYAQG--YSDSQGILSARRAVVTR------YELVPGFPRFDVDDVYLGNGVSELITMTLQALLDNGDQVLIPSPDYPLWT--ASTSLAGGTPVHYLCDETQGWQPDIADLESKITERTKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLL 230          
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: AAT_STRGR (Probable aspartate aminotransferase (Fragment) OS=Streptomyces griseus GN=aspC PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12
Identity = 52/178 (29.21%), Postives = 81/178 (45.51%), Query Frame = 3
Query:  186 RPVIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLYEIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVM 719
            RPVI  G G+P     F T     DA V+A R   Y+ Y+P    P  +  IA+   RD  Y++    + +T G  QAI  + + +  PG  +++P P +  Y      +         D   G  + V ++ +EA   E T  ++ ++P NP G V+S    + I R A   G+ VM
Sbjct:   39 RPVIGFGAGEPD----FPTPDYIVDAAVEACRNPKYHRYTPQ-RAPELKAAIAEKTLRDSGYEVDAGQILVTNGGKQAIYEAFAAILDPGDEVIVPAPYWTTYPESIRLAGGVPVEVVADETTG--YRVSVEQLEAARTEKTKVVLFVSPSNPTGAVYSEADAEAIGRWAVEHGLWVM 209          
BLAST of FC930992 vs. ExPASy Swiss-Prot
Match: AAT_AQUAE (Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11
Identity = 49/178 (27.53%), Postives = 82/178 (46.07%), Query Frame = 3
Query:  192 VIHLGHGDPSAFPCFRTSTVAEDAVVDALRTAHYNCYSPTFGVPSARRGIADYLNRDLPYKLSPEDVYLTLGCSQAIEISLSVLARPGANILIPRPGYPLY--EIHAAGSNNNLEARHYDLLPGKCWEVDLDGVEALADENTVAIVIINPGNPCGNVFSYQHLQKIARTARNLGIIVM 719
            VI  G G+P     F T    ++A + ALR      Y+P+ G+P  R  IA+ L ++   +  P ++ ++ G    + +    +   G  +L+P P +  Y  +I   G           L   K +++ L+ V+    E T AIVI +P NP G V+  + L+KIA      GI ++
Sbjct:   34 VIGFGAGEPD----FDTPDFIKEACIRALREGKTK-YAPSAGIPELREAIAEKLLKENKVEYKPSEIVVSAGAKMVLFLIFMAILDEGDEVLLPSPYWVTYPEQIRFFGG----VPVEVPLKKEKGFQLSLEDVKEKVTERTKAIVINSPNNPTGAVYEEEELKKIAEFCVERGIFII 202          
The following BLAST results are available for this feature:
BLAST of FC930992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
Y286_HAEIN1.555e-1531.32Uncharacterized aminotransferase HI0286 OS=Haemoph... [more]
ALAT_YEAST1.317e-1429.90Probable alanine aminotransferase OS=Saccharomyces... [more]
ALAM_YEAST1.317e-1433.78Probable alanine aminotransferase, mitochondrial O... [more]
YUGH_BACSU2.933e-1430.73Putative aminotransferase yugH OS=Bacillus subtili... [more]
AAT_STRVG1.115e-1329.12Aspartate aminotransferase OS=Streptomyces virgini... [more]
AAT_MYCTU4.236e-1330.69Probable aspartate aminotransferase OS=Mycobacteri... [more]
AAT_MYCBO4.236e-1330.69Probable aspartate aminotransferase OS=Mycobacteri... [more]
AAT_STRGR3.586e-1229.21Probable aspartate aminotransferase (Fragment) OS=... [more]
AAT_AQUAE6.762e-1127.53Aspartate aminotransferase OS=Aquifex aeolicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34100C03EF PostHarvP1 Citrus clementina cDNA clone C34100C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930992 ID=FC930992; Name=FC930992; organism=Citrus clementina; type=EST; length=723bp
GGCTTCTTGGCTCATGCCGCTGAAAAATCATGGAAAACGAGTCTCTCCTT
CATCAGAAATTGAGTCTTTTTGGTGTTAACCCGAAAAAAGAGGAGCGCCA
CAACGACAACAAGACCACTTCTTCAGCCGTTACCATTCGAGGAGTCCTCA
CTTCCTTAAAAGAGAATCTGAACGAAAAGGACAAGAGACCCGTCATTCAC
CTTGGCCACGGCGACCCCTCGGCGTTTCCTTGCTTTCGGACAAGCACCGT
AGCCGAAGATGCCGTCGTCGATGCTCTCCGGACTGCCCACTACAACTGCT
ATTCGCCCACCTTTGGTGTTCCTTCTGCTAGAAGGGGCATAGCTGATTAT
CTGAACCGTGACCTCCCATACAAGTTATCACCGGAAGATGTTTATCTCAC
ACTTGGATGTAGCCAAGCAATCGAAATATCATTATCGGTCCTCGCTCGTC
CTGGTGCCAATATTTTGATTCCAAGGCCCGGCTACCCTTTATATGAAATT
CATGCAGCAGGGAGTAACAACAACCTTGAAGCTCGCCATTATGATCTTCT
TCCTGGAAAGTGTTGGGAAGTGGATCTTGATGGAGTTGAAGCCCTTGCAG
ATGAGAATACAGTTGCCATTGTCATCATAAACCCTGGCAATCCATGCGGA
AATGTCTTCAGTTACCAACATCTGCAGAAAATTGCGCGGACAGCAAGAAA
TCTTGGGATTATTGTGATGCTGA
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