FC931115

Overview
NameFC931115
Unique NameFC931115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_XANCB (Phosphoserine aminotransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=serC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.377e-33
Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 1
Query:   25 WRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            W   G  ++E+SHR  +F ++   AE+DLR LL+IP +Y+VLF  GGATT  A +PLN   P   VDY+V+G WG  A K+A  + + +V   G+   Y  IP   +   +P A Y+HI ANETIHGVEF++ P     T  L AD SS+  S+P+D+ R
Sbjct:   29 WNGVGASIVEISHRSADFMAVAAAAEADLRTLLSIPDDYAVLFTSGGATTIQALLPLNFAAPGQAVDYVVSGHWGKTAIKQATPYVDVRVAADGQPGGYVDIPPVASWTLSPHAAYVHITANETIHGVEFRDTPDV--GTLPLFADFSSSIASEPLDIRR 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_XANC8 (Phosphoserine aminotransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=serC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.377e-33
Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 1
Query:   25 WRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            W   G  ++E+SHR  +F ++   AE+DLR LL+IP +Y+VLF  GGATT  A +PLN   P   VDY+V+G WG  A K+A  + + +V   G+   Y  IP   +   +P A Y+HI ANETIHGVEF++ P     T  L AD SS+  S+P+D+ R
Sbjct:   29 WNGVGASIVEISHRSADFMAVAAAAEADLRTLLSIPDDYAVLFTSGGATTIQALLPLNFAAPGQAVDYVVSGHWGKTAIKQATPYVDVRVAADGQPGGYVDIPPVASWTLSPHAAYVHITANETIHGVEFRDTPDV--GTLPLFADFSSSIASEPLDIRR 186          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERPY (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=serC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.799e-33
Identity = 76/162 (46.91%), Postives = 95/162 (58.64%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL   ++  DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI GV   E P   N   ++VAD SS+  S+P+D++R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDSNSADYIDGGYWAHSAVKEAQKYCTPHVIDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGVAINEQPDFGNK--VVVADYSSSILSRPIDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERPP (Phosphoserine aminotransferase OS=Yersinia pestis (strain Pestoides F) GN=serC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.799e-33
Identity = 76/162 (46.91%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL    +  DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI GV   E P   N   ++VAD SS+  S+P+D++R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDRNSADYIDGGYWAHSAIKEAQKYCTPNVIDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGVAINEQPDFGNK--VVVADYSSSILSRPIDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERPG (Phosphoserine aminotransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=serC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.799e-33
Identity = 76/162 (46.91%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL    +  DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI GV   E P   N   ++VAD SS+  S+P+D++R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDRNSADYIDGGYWAHSAIKEAQKYCTPNVIDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGVAINEQPDFGNK--VVVADYSSSILSRPIDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERPE (Phosphoserine aminotransferase OS=Yersinia pestis GN=serC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.799e-33
Identity = 76/162 (46.91%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL    +  DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI GV   E P   N   ++VAD SS+  S+P+D++R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDRNSADYIDGGYWAHSAIKEAQKYCTPNVIDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGVAINEQPDFGNK--VVVADYSSSILSRPIDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERPA (Phosphoserine aminotransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=serC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.799e-33
Identity = 76/162 (46.91%), Postives = 94/162 (58.02%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL    +  DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI GV   E P   N   ++VAD SS+  S+P+D++R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDRNSADYIDGGYWAHSAIKEAQKYCTPNVIDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGVAINEQPDFGNK--VVVADYSSSILSRPIDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_YERP3 (Phosphoserine aminotransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=serC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.799e-33
Identity = 76/162 (46.91%), Postives = 95/162 (58.64%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            NW   G  VME+SHR KEF  + E++E DLR LL IP  Y VLF  GGA  QFAAVPLNL   ++  DYI  G W   A KEAQK+C P VI  +      T I      + + +A Y+H C NETI GV   E P   N   ++VAD SS+  S+P+D++R
Sbjct:   28 NWHGLGTSVMEISHRSKEFMQVAEESEKDLRDLLQIPANYKVLFCHGGARAQFAAVPLNLLGDSNSADYIDGGYWAHSAVKEAQKYCTPHVIDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGVAINEQPDFGNK--VVVADYSSSILSRPIDISR 187          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_DROME (Probable phosphoserine aminotransferase OS=Drosophila melanogaster GN=CG11899 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.799e-33
Identity = 74/161 (45.96%), Postives = 96/161 (59.63%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTR 504
            N   SG+ VMEMSHR   +  I +   SDLR LLN+P  Y +L +QGG T QFAAV LNL       DY++TGSW  KA KEA ++     +   K  KYT +P  +  + +P+A Y++ C NET+ GVEF   P        LVADMSSNF S+P DV++
Sbjct:   26 NCNGSGISVMEMSHRSSNYAKIHDATISDLRELLNVPSNYKILLMQGGGTGQFAAVALNLIGKTGTADYVITGSWSAKAAKEAAQYGTVNAVLP-KLAKYTTVPRQETWKLDPNASYVYYCDNETVEGVEFDFVPEVPAGVP-LVADMSSNFLSRPFDVSK 184          
BLAST of FC931115 vs. ExPASy Swiss-Prot
Match: SERC_BORPD (Phosphoserine aminotransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=serC PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.349e-33
Identity = 77/175 (44.00%), Postives = 112/175 (64.00%), Query Frame = 1
Query:   22 NWRASGMGVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS-GKAEK--------YTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYP--SAKNSTGI-LVADMSSNFCSKPVDVTR 504
            +W  SGM VMEMSHRGK F  I ++AE+DLR LL +P +Y+V+F+QGG   + A VP+NL     +   D+++TG W  ++ KEA ++ +  V  S G+A          +T +P  D  +  P+A YLH+C+NETIHGVEF ++P  +A  +  + LV D SS+F S+P+DVTR
Sbjct:   28 DWNGSGMSVMEMSHRGKHFVQICDQAEADLRDLLGVPADYAVMFMQGGGLGENAIVPMNLIGRRGHPAADFVLTGHWSTRSHKEAGRYGDIHVAASAGEAASVDGREQAPWTWVPPADTWKVRPEAAYLHLCSNETIHGVEFTDWPDLAALGAPDVPLVVDASSHFLSRPMDVTR 202          
The following BLAST results are available for this feature:
BLAST of FC931115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_XANCB1.377e-3344.38Phosphoserine aminotransferase OS=Xanthomonas camp... [more]
SERC_XANC81.377e-3344.38Phosphoserine aminotransferase OS=Xanthomonas camp... [more]
SERC_YERPY1.799e-3346.91Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_YERPP1.799e-3346.91Phosphoserine aminotransferase OS=Yersinia pestis ... [more]
SERC_YERPG1.799e-3346.91Phosphoserine aminotransferase OS=Yersinia pestis ... [more]
SERC_YERPE1.799e-3346.91Phosphoserine aminotransferase OS=Yersinia pestis ... [more]
SERC_YERPA1.799e-3346.91Phosphoserine aminotransferase OS=Yersinia pestis ... [more]
SERC_YERP31.799e-3346.91Phosphoserine aminotransferase OS=Yersinia pseudot... [more]
SERC_DROME1.799e-3345.96Probable phosphoserine aminotransferase OS=Drosoph... [more]
SERC_BORPD2.349e-3344.00Phosphoserine aminotransferase OS=Bordetella petri... [more]

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Properties
Property NameValue
Genbank descriptionC34101F03EF PostHarvP1 Citrus clementina cDNA clone C34101F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931115 ID=FC931115; Name=FC931115; organism=Citrus clementina; type=EST; length=505bp
ATCTGGCCGGGAGGAGCTTTCAACTGGCGCGCATCTGGCATGGGCGTGAT
GGAAATGAGCCATAGAGGTAAAGAATTCAAGTCCATTATTGAAAAAGCTG
AATCGGATCTTAGAGCCCTCTTGAATATTCCCCAAGAATATTCTGTTTTG
TTCTTGCAAGGCGGCGCTACGACACAGTTCGCCGCCGTTCCATTGAATTT
GTGTACACCTAATGACCCGGTCGATTATATCGTCACCGGGTCGTGGGGTG
ACAAAGCTTTTAAAGAAGCGCAAAAATTTTGCAACCCACAAGTGATTTGG
TCTGGAAAAGCTGAAAAGTACACAAAGATTCCAAATTTTGATGCTTTGGA
GCAAAACCCAGATGCCAAGTATTTGCATATTTGTGCTAATGAGACAATTC
ATGGTGTTGAGTTTAAGGAGTATCCGTCGGCTAAGAATTCAACTGGTATT
CTAGTCGCTGATATGTCTTCCAATTTTTGTTCAAAGCCTGTTGATGTTAC
CAGGT
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