FC931120

Overview
NameFC931120
Unique NameFC931120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: PFA4_NEUCR (Palmitoyltransferase PFA4 OS=Neurospora crassa GN=pfa-4 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 36/110 (32.73%), Postives = 50/110 (45.45%), Query Frame = 3 
Query:  132 ILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNY 461
            ++F+ILLV L  +Y      DPG     ++            N   G             RGP ++  +C +C   KPPR HHC  C RC+ +MDHHC W  NCV  + +
Sbjct:   53 LIFNILLVCLWLTYYQACTVDPGQ----YKFPPKEKEDGDNNNKRGG-------------RGPQKAK-WCKKCDAPKPPRAHHCRHCARCIPRMDHHCPWTGNCVSLQTF 144
The following BLAST results are available for this feature:
BLAST of FC931120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
PFA4_NEUCR8.235e-1132.73Palmitoyltransferase PFA4 OS=Neurospora crassa GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34101F09EF PostHarvP1 Citrus clementina cDNA clone C34101F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931120 ID=FC931120; Name=FC931120; organism=Citrus clementina; type=EST; length=692bp
GCTGGGCTACTTCATGATCCTGCTAGTGGCCGCAATTATCGCTGTGTCGT
ACTACGCCGTCGTTGTAATTACCTGTGGCCCACAGTTGCTTCGCGGCGGA
GTCCACTCTTTTTTTTGGGTTCTCAATAATTATTCTATTCCATATTCTGC
TTGTAATGTTGGTATGGAGCTATGTTATGGTAGTGTTTTGGGACCCTGGT
TCTGTGCCTGAAAATTGGAGGTCAGTTTCAGTATCATCATCATCATCATC
GGGGGTGAATTTAGAGGCTGGTACTTCTTCTCAATCATTAGATAACGTGG
GACCGGATGCACGGGGTCCTTCACGGTCGGTAGGCTTCTGTGATCGATGC
CAAAATGGGAAGCCTCCCCGTTGCCATCATTGTTCTGTTTGTCAAAGATG
TGTTCTTAAGATGGATCACCACTGTGTTTGGGTGGTGAATTGTGTTGGAG
CGCGCAACTACAAGTCTTTTCTTCTTTTCTTACTGTATACATTTCTGGAG
ACAACAATGGATACTCTGGTGTTGCTGCCTAGTTTTATCAAGTTCTTTGG
CAAAGCAAAGAACCATTCTTCCTCTCCTGCCAATCTAGCTATCGTTTTTC
TAGCTTTTGTTATTAATTTGGCTTTTGCTTTGAGTCTTCTTTGTTTCATT
GTCATGCATTCGTCGCTTGTATCAAGCAACACGACATCAATC
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