FC931138

Overview
NameFC931138
Unique NameFC931138
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_HALS3 (V-type ATP synthase beta chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=atpB PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.561e-45
Identity = 90/176 (51.14%), Postives = 124/176 (70.45%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDN 682
            EY+T+T V+GPLV ++  +   Y EIV I   +G ++RGQVLE       +QVFEGT G+  K  +V+F GE LK PV+ D+LGR+ +GSG PID GP I+P+  +DI G +INP  R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPH+++A QI RQA + +   +TD+
Sbjct:    3 EYQTITEVSGPLVYVETDEPIGYDEIVEIETPNGDVKRGQVLESSDGFVAIQVFEGTEGV-GKDASVRFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDDRVDIVGEAINPHAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETDD 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_NATPD (V-type ATP synthase beta chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpB PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.462e-44
Identity = 88/167 (52.69%), Postives = 120/167 (71.86%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGL 655
            EY+T+T ++GPLV  +  +   Y E+V I    G  RRGQVLE   E   +QVFEGTSGID   ++V+F GE L+ P++ ++LGR+ +GSG+PID GP I P+   +I G++INP+ R YPEE IQTG+S ID MN++ RGQK+P+FS +GLPHNE+A QI RQA +
Sbjct:    4 EYKTITEISGPLVFAEVDEPVGYDEMVEIETPSGETRRGQVLESTSEFVAIQVFEGTSGIDRN-SSVRFLGETLQMPLTEELLGRVLSGSGEPIDGGPEIEPDEEREIVGAAINPTAREYPEEFIQTGVSAIDGMNTLIRGQKLPIFSGSGLPHNELALQIARQASV 169          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_DICT6 (V-type ATP synthase beta chain OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=atpB PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44
Identity = 88/173 (50.87%), Postives = 122/173 (70.52%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK 673
            EY +V+ ++GPLV+++ ++  KY E+V ++L +G +R+GQVLE     A+VQ+F  T  +  K   V+F G VL+  +S ++LGR F+G G+P D GP I+P+  +DI+GS INP  R YP+E IQTGIS ID MN+I RGQKIP+FS AGLPH  +AAQI RQA L+   EK
Sbjct:    4 EYTSVSKISGPLVLVENIENVKYGEVVEVKLANGEIRQGQVLEAQEGAALVQMFASTQDLSLKGMRVKFLGHVLEINLSPEILGRTFDGLGRPRDGGPEIIPQKRMDINGSPINPYSRAYPQEFIQTGISAIDGMNTIVRGQKIPIFSGAGLPHATLAAQIARQARLLNEEEK 176          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_HALLT (V-type ATP synthase beta chain OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=atpB PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44
Identity = 89/176 (50.57%), Postives = 122/176 (69.32%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDN 682
            EY+T+T ++GPLV  +  +   Y EIV I    G   RGQVLE       +QVFEGTSGID    +V+F GE +K PV+ D+LGR+ +GSG+PID+GP I+PE   DI G++INP  R YPEE I+TG+S ID MN++ RGQK+P+FS++G PH+++A QI RQA + +  E  D+
Sbjct:    3 EYQTITEISGPLVYAEVDEAIGYDEIVEIETAQGETLRGQVLESSEGVVAIQVFEGTSGIDQN-ASVRFLGETMKMPVTEDLLGRVLDGSGRPIDDGPEIVPEERQDIVGAAINPYSREYPEEFIETGVSAIDGMNTLVRGQKLPIFSSSGQPHSQLAMQIARQASVPEEEEGGDD 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_DICTD (V-type ATP synthase beta chain OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=atpB PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44
Identity = 87/173 (50.29%), Postives = 122/173 (70.52%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEK 673
            EY +V+ ++GPLV+++ ++  KY E+V ++L +G +R+GQVLE     A+VQ+F  T  +  K   ++F G VL+  +S ++LGR F+G G+P D GP I+P+  +DI+GS INP  R YP+E IQTGIS ID MN+I RGQKIP+FS AGLPH  +AAQI RQA L+   EK
Sbjct:    4 EYTSVSKISGPLVLVENIENVKYGEVVEVKLANGEIRQGQVLEAQEGAALVQMFASTQDLSLKGMRIKFLGHVLEINLSPEILGRTFDGLGRPRDGGPEIIPQKRMDINGSPINPYSRAYPQEFIQTGISAIDGMNTIVRGQKIPIFSGAGLPHATLAAQIARQARLLNEEEK 176          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_HALWD (V-type ATP synthase beta chain OS=Haloquadratum walsbyi (strain DSM 16790) GN=atpB PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.256e-44
Identity = 89/176 (50.57%), Postives = 123/176 (69.89%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDN 682
            EY+TVT ++GPL+  +  +   Y EIV I   +G ++RGQVLE +     +QVFEGTSGID    +V+F+GE LK  V+ D+LGR+ +GSG+PID GP IL +   +I G++INP  R YPEE IQTG++ +D MN++ RGQK+P+FS +GLPHNE+A QI RQA + +     DN
Sbjct:    3 EYQTVTEISGPLIYAEVDEPIGYDEIVEIETPNGDIKRGQVLESEDGLVAIQVFEGTSGIDTN-ASVRFSGETLKMKVTEDLLGRVLDGSGQPIDGGPEILADERREIVGAAINPYAREYPEEFIQTGVAAVDGMNTLVRGQKLPIFSGSGLPHNELALQIARQATVPEEENADDN 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_CLOD6 (V-type ATP synthase beta chain OS=Clostridium difficile (strain 630) GN=atpB PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.473e-44
Identity = 84/165 (50.91%), Postives = 124/165 (75.15%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            EY+++  VAGPL++++ V+G K+ E+  I L +G +RR +VLEV+G+ A+VQ+FE ++GI+   + V+F G+ L   VS D+LGR+F+G G+PID GP I+P+  LDI+G+ INP+ R YP E IQTG+S ID +N++ RGQK+P+FS +GLPH  +A QI RQA
Sbjct:    4 EYKSIQEVAGPLMLINGVEGVKFDELGEIELSNGEIRRCKVLEVNGDTALVQLFESSTGINLAESKVRFLGKSLDFGVSPDILGRVFSGMGRPIDGGPEIIPDKRLDINGAPINPAARDYPAEFIQTGVSAIDGLNTLVRGQKLPIFSGSGLPHANLAVQIARQA 168          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_THEAC (V-type ATP synthase beta chain OS=Thermoplasma acidophilum GN=atpB PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.237e-43
Identity = 85/177 (48.02%), Postives = 126/177 (71.19%), Query Frame = 2
Query:  152 MEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDN 682
            + Y++V+ ++GPL+ ++ V    Y E+V+I L +G  R+GQVL+     A+VQ+F  T+GI  + TTV+F GE  + P+S DMLGR+FNG G+PID GP I+ +  ++I+ ++INP  R  P E I+TGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA   K L+ ++N
Sbjct:    4 LAYKSVSQISGPLLFVENVPNAAYNEMVDIELENGETRQGQVLDTRKGLAIVQIFGATTGIGTQGTTVKFRGETARLPISEDMLGRVFNGIGEPIDGGPEIIAKERMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQA---KVLDSSEN 177          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_THET8 (V-type ATP synthase beta chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=atpB PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43
Identity = 91/165 (55.15%), Postives = 116/165 (70.30%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            EY  +T ++GPL+ ++  K   Y  IV+I+ G G +R GQV+EV  E AV+QVFE T+G+D   T+V    +V +  VS +MLGR FNG GKPID  PPI PE  L I+G  +NP  R  PE+ IQTGISTIDVMN++ RGQK+P+FS +GLP NEIAAQI RQA
Sbjct:    7 EYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEETTGLDLATTSVSLVEDVARLGVSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIAAQIARQA 171          
BLAST of FC931138 vs. ExPASy Swiss-Prot
Match: VATB_THET2 (V-type ATP synthase beta chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=atpB PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43
Identity = 91/165 (55.15%), Postives = 116/165 (70.30%), Query Frame = 2
Query:  155 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQA 649
            EY  +T ++GPL+ ++  K   Y  IV+I+ G G +R GQV+EV  E AV+QVFE T+G+D   T+V    +V +  VS +MLGR FNG GKPID  PPI PE  L I+G  +NP  R  PE+ IQTGISTIDVMN++ RGQK+P+FS +GLP NEIAAQI RQA
Sbjct:    7 EYTGITYISGPLLFVENAKDLAYGAIVDIKDGTGRVRGGQVIEVSEEYAVIQVFEETTGLDLATTSVSLVEDVARLGVSKEMLGRRFNGIGKPIDGLPPITPEKRLPITGLPLNPVARRKPEQFIQTGISTIDVMNTLVRGQKLPIFSGSGLPANEIAAQIARQA 171          
The following BLAST results are available for this feature:
BLAST of FC931138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
VATB_HALS36.561e-4551.14V-type ATP synthase beta chain OS=Halobacterium sa... [more]
VATB_NATPD1.462e-4452.69V-type ATP synthase beta chain OS=Natronomonas pha... [more]
VATB_DICT61.909e-4450.87V-type ATP synthase beta chain OS=Dictyoglomus the... [more]
VATB_HALLT2.493e-4450.57V-type ATP synthase beta chain OS=Halorubrum lacus... [more]
VATB_DICTD2.493e-4450.29V-type ATP synthase beta chain OS=Dictyoglomus tur... [more]
VATB_HALWD3.256e-4450.57V-type ATP synthase beta chain OS=Haloquadratum wa... [more]
VATB_CLOD69.473e-4450.91V-type ATP synthase beta chain OS=Clostridium diff... [more]
VATB_THEAC1.237e-4348.02V-type ATP synthase beta chain OS=Thermoplasma aci... [more]
VATB_THET82.110e-4355.15V-type ATP synthase beta chain OS=Thermus thermoph... [more]
VATB_THET22.110e-4355.15V-type ATP synthase beta chain OS=Thermus thermoph... [more]

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Properties
Property NameValue
Genbank descriptionC34101H05EF PostHarvP1 Citrus clementina cDNA clone C34101H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931138 ID=FC931138; Name=FC931138; organism=Citrus clementina; type=EST; length=686bp
GCATCTCTCATTGCCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCA
CTCACAGAGATCACAAGAAAGACCAAAAAAAAAGAAAAAAATTGAAAATG
GGTGTGGCACAAAACAATGTTGACATGGAGGAGGGTACTCTGGAAGTCGC
CATGGAGTACAGAACGGTCACCGGAGTTGCTGGGCCTCTAGTTATCCTTG
ATAAAGTCAAGGGACCCAAATATTATGAGATTGTCAATATTCGGTTGGGA
GATGGAACAATGCGACGTGGTCAGGTCCTAGAAGTTGATGGAGAGAAAGC
TGTTGTTCAGGTCTTTGAAGGGACATCCGGAATTGACAATAAATTTACAA
CTGTGCAGTTTACAGGGGAGGTTCTGAAGACTCCTGTCTCATTGGATATG
CTTGGGCGCATTTTTAATGGTTCTGGGAAACCCATTGATAATGGTCCCCC
AATTTTGCCAGAGGCTTACTTGGATATATCCGGAAGTTCTATCAACCCTA
GTGAGAGAACCTATCCTGAAGAGATGATACAGACAGGGATTTCTACCATT
GATGTGATGAACTCCATTGCTAGAGGACAAAAGATCCCTCTTTTTTCTGC
TGCCGGTCTTCCCCATAATGAAATTGCTGCTCAGATTTGTCGCCAGGCTG
GTTTAGTCAAGCGATTGGAGAAGACTGATAATCTTC
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