FC931139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_VIBC3 (Aspartate carbamoyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=pyrB PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.833e-39 Identity = 87/185 (47.03%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAAT-TAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 +I + R L I + A ++ K P +++K ++A+ F+EPSTRTRLSFE+A++R+GG V+ +N S A KGETL D++R + Y D VMRH + GAAR A+ + IPVINAGDG QHP+Q LLD+Y+I G+LD + V VGDL GRTV SLA LAK+ + + YFV+P Sbjct: 10 IISIAELSRAELELIVKTAGQL----KAQPNPELIKHKVVASCFFEPSTRTRLSFETAIQRIGGSVIGFDNGGNTSLAKKGETLADSVRVISSYVDAFVMRHPQEGAARLASEFSNGIPVINAGDGSNQHPSQTLLDLYSIFETQGRLDNLDVAFVGDLKYGRTVHSLAQALAKFDNNRFYFVAP 190
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_CELJU (Aspartate carbamoyltransferase OS=Cellvibrio japonicus (strain Ueda107) GN=pyrB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.833e-39 Identity = 85/188 (45.21%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGK----LDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 ++ QQF R+ +N IF+VA ME +++L+G ++ +F+EPSTRTR+SF +A LGG V T E S KGE+L DT R + GYSD+I MRH +G+ A + +PVIN GDGP +HPTQALLD+YTI +E+ +D +++ ++GDL +GRTV SL LL + +V I VSP Sbjct: 8 ILSIQQFQREDINRIFDVADAMEPYALRRRVTRVLEGAILGNMFFEPSTRTRVSFGAAFNLLGGNVRETTGF-ESSSLTKGESLFDTARVLSGYSDVICMRHPAAGSVAEFAEGSRVPVINGGDGPNEHPTQALLDLYTIRKELRSKGRGIDDLRIAMIGDLKHGRTVHSLCKLLGLFNNVSITLVSP 194
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYR1_SQUAC (CAD protein OS=Squalus acanthias GN=CAD PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.833e-39 Identity = 85/184 (46.20%), Postives = 123/184 (66.85%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 ++ ++F +D L+ +F VA + + ILKG +MA++FYE STRT SF +AM RLGG V+ A S KGE+L D+++T+ Y D++V+RH E GA AA + P+INAGDG G+HPTQALLD++TI E+G ++G+ + +VGDL +GRTV SLAYLL Y+ V + +V+P Sbjct: 1943 ILSVKRFTKDQLSHLFNVAHNLRLTVQKDRSLDILKGKVMASMFYEVSTRTSSSFRAAMHRLGGSVIHFSEAT--SSVQKGESLLDSVQTMSCYVDVVVLRHPEPGAVELAAKHSRKPIINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLAYLLTLYR-VNLRYVTP 2123
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_VIBCH (Aspartate carbamoyltransferase OS=Vibrio cholerae GN=pyrB PE=3 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.394e-39 Identity = 86/185 (46.49%), Postives = 120/185 (64.86%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAAT-TAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 +I + R L I + A ++ K P +++K ++A+ F+EPSTRTRLSFE+A++R+GG V+ +N S A KGETL D++R + Y D VMRH + GAAR A+ + +PVINAGDG QHP+Q LLD+Y+I G+LD + V VGDL GRTV SLA LAK+ + + YFV+P Sbjct: 10 IISIAELSRAELELIVKTAGQL----KAQPNPELIKHKVVASCFFEPSTRTRLSFETAIQRIGGSVIGFDNGGNTSLAKKGETLADSVRVISSYVDAFVMRHPQEGAARLASEFSNGVPVINAGDGSNQHPSQTLLDLYSIFETQGRLDNLDVAFVGDLKYGRTVHSLAQALAKFDNNRFYFVAP 190
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_STAMF (Aspartate carbamoyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pyrB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.394e-39 Identity = 87/197 (44.16%), Postives = 122/197 (61.93%), Query Frame = 3 Query: 93 FQLDDVIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVL--TTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVVK*R 677 F DV+ + R+ L +F VA +MEK +L GY++A F EPSTRT SF+SA RLGG+ L T+E A AKGE DTIR ++ YSD+IV+R G AR AA A PVIN GDG +HPTQA++D+YT+ + G +DG+ +G++GDL RT+ S Y L +++ K+Y +SPG+++ R Sbjct: 3 FPRGDVLSILDYSRENLEYLFLVADQMEKYLSEKKKLHLLDGYIVALAFLEPSTRTMYSFQSATYRLGGKTLVFTSETATSL---AKGENFADTIRMLDSYSDLIVIRSKYEGTARYAAELAENPVINGGDGRHEHPTQAMIDLYTMYKIFGGIDGLTIGILGDLKYARTITSFLYGLTRFKPRKVYLISPGILRLR 196
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_DICNV (Aspartate carbamoyltransferase OS=Dichelobacter nodosus (strain VCS1703A) GN=pyrB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.394e-39 Identity = 83/192 (43.23%), Postives = 120/192 (62.50%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKL----DGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVVK 671 ++ F R L + A+ +E + + +L G +MA LF+E STRTR+SF +A RLGG V+ T FS +KGE+L DT R + GY+D+IVMRH + G+ A+ +PVINAGDG G+HP+QALLD YTI E +L DG+ + +VGDL NGRT+ SLA LL+ + ++ F++P ++ Sbjct: 8 ILSIDHFSRQDLEELLMTAKLLEPVAQRKVRCNVLDGSVMANLFFEASTRTRMSFHTAFARLGGSVVDTTGFT-FSSISKGESLSDTARVIAGYADVIVMRHPDQGSVAEFASKINVPVINAGDGIGEHPSQALLDYYTINNEFERLKKNIDGMTIAMVGDLKNGRTIHSLAKLLSLFDNIHFRFIAPETLR 198
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_ALISL (Aspartate carbamoyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=pyrB PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39 Identity = 87/188 (46.28%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAV-IPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVV 668 +I + R+ L I E A ++K P +LK ++A+ F+E STRTRLSFE+A++RLGG V+ ++A S A KGETL D+++ + Y++ VMRH GAAR A+ + PVINAGDG QHPTQ LLD+YTI G+LD + + VGDL GRTV SL LAK+ VK +F++P V+ Sbjct: 10 IISIPELSREELELIVETAGNIKK----EPQPDLLKNKVIASCFFEASTRTRLSFETAIQRLGGSVIGFDSAGNTSLAQKGETLADSVQIIASYANAYVMRHPREGAARLASEFSNGTPVINAGDGANQHPTQTLLDLYTIYETQGRLDNLNIAFVGDLKYGRTVHSLTQALAKFNGVKFFFIAPEVL 193
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_PHOPR (Aspartate carbamoyltransferase OS=Photobacterium profundum GN=pyrB PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 84/188 (44.68%), Postives = 120/188 (63.83%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAAT-TAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVV 668 +I + +R L I E A I K P ++LK ++A+ F+EPSTRTRLSFE+A++RLGG V+ +N S A KGETL D+++ + Y D VMRH + GAAR A+ + +P+IN GDG QHPTQ LLD+++I G+LD + V VGDL GRTV SL L+K+ ++ +FV+P ++ Sbjct: 10 IISIPELNRSELELIVETAG----ILKAEPNPELLKNKVVASCFFEPSTRTRLSFETAVQRLGGTVIGFDNGGNTSLAKKGETLADSVQVISSYVDAFVMRHPQEGAARLASEFSNGVPIINGGDGANQHPTQTLLDLFSIFETQGRLDNLNVAFVGDLKYGRTVHSLTQALSKFNNINFFFVAPEIL 193
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_METMJ (Aspartate carbamoyltransferase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pyrB PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 93/184 (50.54%), Postives = 125/184 (67.93%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSP 659 +I + F+R L+ + + A+E + K PG +L L+A LF+EPSTRTR+SF +AM RLGG ++ ++ E S KGETL DTIR V GY+D IV+RH + GAAR A+ A +PVINAGDG GQHP+Q LLD+YTI R+ +DGI VGL+GDL GRT SLA L+ Y V ++ ++P Sbjct: 4 IISIRDFERSDLDYLLDRAQEFDT-GKYRPG--MLDDKLVALLFFEPSTRTRMSFATAMARLGGRSISVDSV-EASSIVKGETLADTIRVVSGYADAIVLRHPKEGAARLASEFATVPVINAGDGAGQHPSQTLLDLYTI-RQSMPVDGIDVGLLGDLRYGRTAHSLALALSLY-GVTLHTIAP 181
BLAST of FC931139 vs. ExPASy Swiss-Prot
Match: PYRB_CHRVO (Aspartate carbamoyltransferase OS=Chromobacterium violaceum GN=pyrB PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 86/187 (45.99%), Postives = 120/187 (64.17%), Query Frame = 3 Query: 108 VIEAQQFDRDILNAIFEVAREMEKIEKNSPGSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSFAAKGETLEDTIRTVEGYSDIIVMRHFESGAARRAATTAVIPVINAGDGPGQHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYQDVKIYFVSPGVV 668 +I F R+ L + + A + K SP +L+ L+A+ F+EPSTRTRLSFE+A++RLGG ++ + S A KGETL D+I+ + Y+D +VMRH + GAAR A+ + +PVIN GDG QHPTQ LLD+++I G+LDG+ V GDL GRTV SLA L+ + + YFVSP V+ Sbjct: 6 IISIPDFSREELELVVDTAARL----KQSPRGDLLQDKLVASCFFEPSTRTRLSFETAVQRLGGNIIGFADGGNTS-AKKGETLADSIKIISSYTDAVVMRHPKEGAARLASEFSAVPVINGGDGSNQHPTQTLLDLFSIRETQGRLDGLTVAFAGDLKYGRTVHSLAQALSLF-GARFYFVSPEVL 186 The following BLAST results are available for this feature:
BLAST of FC931139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931139 ID=FC931139; Name=FC931139; organism=Citrus clementina; type=EST; length=685bpback to top |