FC931146

Overview
NameFC931146
Unique NameFC931146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29
Identity = 73/176 (41.48%), Postives = 103/176 (58.52%), Query Frame = 3
Query:  204 RITKKERYMGGAGVSGVHHRL------GDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY-FSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDIWLSR 710
            R + KER +  AG+    ++       G+S   ++ L N++D QY+GEIGIG+PPQ F V+FDTGS+NLWVPS++C     +C  H  Y S +S++Y E G +  I YGSG + GF SQ              F E T    + F+LA+FDG++G+GF   AVG   PV+D  LS+
Sbjct:   42 RESLKERGVDVAGLGAEWNQFTKRLSSGNSTSPVV-LTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQ-DMVTVGGITVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQ 215          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.133e-29
Identity = 65/142 (45.77%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  288 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSI-SCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDIWLSR 710
            +P+ +F DAQY+G I IG+P Q F V+FDTGSSNLW+PS KC  ++ +C  H++Y S  S+TY   G    I YGSG++SGF SQ              F EAT E  + F  A+FDGI+GL F+ I+V    PV+   LS+
Sbjct:   53 IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSISVNSIPPVFYNMLSQ 194          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29
Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N++D +YFG I IGSPPQNF+VIFDT SSNLWVPS  C  S +C  H +++  +SNTY+E+G    I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+D
Sbjct:   69 PLINYLDMEYFGTISIGSPPQNFTVIFDTVSSNLWVPSVYCT-SPACQMHPQFRPSQSNTYSEVGTPFSIAYGTGSLTGIIGADQVSVQGLTVVGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAAGGVTPVFD 202          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29
Identity = 68/140 (48.57%), Postives = 88/140 (62.86%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFF-----SQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N++D +YFG I IGSPPQNF+VIFDTGSSNLWVPS  C  S +C  HSR++  +S+TY++ G+S  I YG+GS+SG       S               F E+  E   TF+ A FDGI+GLG+  +AVG   PV+D
Sbjct:   69 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-TSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFATQVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFD 207          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29
Identity = 62/140 (44.29%), Postives = 87/140 (62.14%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDIWLSR 710
            L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G++SGF SQ              F E T   +L F+LA FDG++G+GF E A+G   P++D  +S+
Sbjct:   72 LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ-DVITVGGITVTQTFGEVTEMPALPFMLAEFDGVVGMGFSEQAIGKVTPLFDNIISQ 210          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29
Identity = 66/135 (48.89%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY-FSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            L N++D QY+GEIGIG+PPQ F VIFDTGS+NLWVPS+KC     +C  HS Y S +S++Y E G    I YGSG + GF SQ              F E T      F+LA+FDG++G+GF   AVG   PV+D
Sbjct:   72 LTNYLDTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIYYGSGKVKGFLSQ-DLVTVGGITVTQTFGEVTELPLRPFMLAKFDGVLGMGFPAQAVGGVTPVFD 205          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29
Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N++D +YFG I IG+PPQNF+VIFDTGSSNLWVPS  C  S +C  H  +   +S+TYTE+G    I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+D
Sbjct:   70 PLINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSDTYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVDGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAAGGVTPVFD 203          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28
Identity = 64/135 (47.41%), Postives = 82/135 (60.74%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N++D +YFG I IGSPPQNF+VIFDTGSSNLWVPS  C  S +C  H  +    S+TY E+G S  I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+D
Sbjct:   65 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-TSPACQTHPVFHPSLSSTYREVGNSFSIQYGTGSLTGIIGADQVSVEGLTVVGQQFGESVQEPGKTFVHAEFDGILGLGYPSLAAGGVTPVFD 198          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28
Identity = 65/140 (46.43%), Postives = 87/140 (62.14%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDIWLSR 710
            L N++D QY+GEIGIG+P Q F VIFDTGS+NLWVPS+KC     +C  H+ Y S +S++Y E G    I+YGSG + GF SQ              F E T    + F+LA+FDG++G+GF   AV   +PV+D  LS+
Sbjct:   76 LTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLSQ-DVVTVGGIIVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVDGVIPVFDHILSQ 214          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.794e-28
Identity = 61/134 (45.52%), Postives = 84/134 (62.69%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            ++N++DA+YFG I IG+PPQ+F+VIFDTGSSNLWVPS+ C  S++C  H R+    S+TY    ++  I YG+GS++G                  F  +  E SLTFL A FDGI+GL +  I+  DA PV+D
Sbjct:   67 MENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPSLTFLFAPFDGILGLAYPSISSSDATPVFD 199          
The following BLAST results are available for this feature:
BLAST of FC931146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
RENI_CANFA3.164e-2941.48Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
CATD_DICDI4.133e-2945.77Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
CATE_RABIT5.398e-2946.67Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
CATE_HUMAN5.398e-2948.57Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
RENI_CALJA7.050e-2944.29Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
RENI_SHEEP9.207e-2948.89Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
CATE_MOUSE9.207e-2946.67Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
CATE_CAVPO1.202e-2847.41Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
RENI_RAT4.569e-2846.43Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
PEPA2_RABIT7.794e-2845.52Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34102A02EF PostHarvP1 Citrus clementina cDNA clone C34102A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931146 ID=FC931146; Name=FC931146; organism=Citrus clementina; type=EST; length=710bp
GGAAGTACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGA
AAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTT
ATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTAC
GGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCT
GCAAGAATAACAAAAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGG
CGTGCACCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGA
ACTTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCA
CAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCC
ATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACA
AGTCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATA
AACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGA
AGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAG
AAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTT
GGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACATATG
GTTGAGCAGG
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