FC931146

Overview
NameFC931146
Unique NameFC931146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24
Identity = 61/142 (42.96%), Postives = 84/142 (59.15%), Query Frame = 3
Query:  282 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            D  PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+R+  + S+TY     +  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+D IW
Sbjct:   64 DEQPLENYLDMEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACTNHNRFNPQDSSTYQSTSGTVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISSSGATPVFDNIW 203          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.228e-24
Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            +KN  D +Y+G I IG+PP++F VIFDTGSSNLWV SS C  + +C  H+++K R+S+TY E GK+ ++ YG+G + G   Q                E+  E       A FDGI+GL +  IA   AVPV+D
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-SAQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFD 138          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 57/139 (41.01%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDIWLSR 710
            L N++D QYFG+I IG+PPQ F+V+FDTGSS+LWVPS  C  S++C  H R+   KS+T+  + KS  I YG+GS+ G                     +T+E    F  + FDGI+GL +  +A   +VPV+D  + R
Sbjct:   66 LTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDR 203          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S +C  H+R+  + S+TY    ++  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+D IW
Sbjct:   51 PLQNYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSIYC-SSEACTNHNRFNPQDSSTYEATSETLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISSSGATPVFDNIW 187          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 56/126 (44.44%), Postives = 76/126 (60.32%), Query Frame = 3
Query:  303 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            +MDA Y+GEI IG+PPQNF V+FDTGSSNLWV S  C  S +C  H+RY   KS+TY   G++  + YG+GS++GFF                F  +  E    F+ A+FDGI+GL +  ++ G A
Sbjct:   71 YMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGA 195          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23
Identity = 56/126 (44.44%), Postives = 76/126 (60.32%), Query Frame = 3
Query:  303 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            +MDA YFGEI IG+PPQNF V+FDTGSSNLWV S  C  S +C  H+R+   KS+TY   G++  + YG+GS++GFF                F  +  E    F+ A+FDGI+GL +  ++ G A
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGA 195          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23
Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = 3
Query:  300 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDA 680
            ++MDA YFG+I +G+PPQ+F V+FDTGSSNLWVPS  C  S++C  H+R+  R S+TY    +S  + YG+GS++G F                F  +  E    F+ A FDGI+GLG+  ++ G A
Sbjct:   73 SYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYC-SSLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQVPKQEFGLSETEPGSDFVYAEFDGILGLGYPGLSEGGA 198          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA3_RABIT (Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23
Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            L+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S +C  H+++    S+T+    +S  I YG+GS++GF                 F  +  E       A FDGI+GL +  I+  DA PV+D
Sbjct:   67 LENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSAACSVHNQFNPEDSSTFQATSESLSITYGTGSMTGFLGYDTVKVGNIEDTNQIFGLSESEPGSFLYYAPFDGILGLAYPSISSSDATPVFD 199          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23
Identity = 60/142 (42.25%), Postives = 83/142 (58.45%), Query Frame = 3
Query:  282 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            D  PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+ +  + S+TY     +  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+D IW
Sbjct:   64 DEQPLENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACTNHNLFNPQDSSTYQSTSGTLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISSSGATPVFDNIW 203          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23
Identity = 60/142 (42.25%), Postives = 83/142 (58.45%), Query Frame = 3
Query:  282 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            D  PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+ +  + S+TY     +  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+D IW
Sbjct:   64 DEQPLENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACTNHNLFNPQDSSTYQSTSGTLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISSSGATPVFDNIW 203          
The following BLAST results are available for this feature:
BLAST of FC931146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
PEPA2_MACFU4.003e-2442.96Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEP2B_GADMO5.228e-2442.54Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
CHYM_CALJA6.828e-2441.01Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
PEPA_BOVIN8.918e-2443.17Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
PEPC_MOUSE1.165e-2344.44Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PEPC_RAT1.521e-2344.44Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PEPC_CAVPO1.521e-2342.52Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
PEPA3_RABIT1.521e-2341.79Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA_MACMU1.987e-2342.25Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA1_MACFU1.987e-2342.25Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionC34102A02EF PostHarvP1 Citrus clementina cDNA clone C34102A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931146 ID=FC931146; Name=FC931146; organism=Citrus clementina; type=EST; length=710bp
GGAAGTACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGA
AAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTT
ATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTAC
GGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCT
GCAAGAATAACAAAAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGG
CGTGCACCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGA
ACTTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCA
CAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCC
ATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACA
AGTCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATA
AACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGA
AGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAG
AAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTT
GGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACATATG
GTTGAGCAGG
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