FC931146

Overview
NameFC931146
Unique NameFC931146
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPE_CHICK (Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.389e-23
Identity = 54/135 (40.00%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N +D +Y+G I IG+PPQ+F+V+FDTGSSNLWVPS  C  S +C  H  +   +S+TY   G++  I+YG+G + G                  F  +T E    F+  +FDGI+GLG+  +A     PV+D
Sbjct:   67 PLLNTLDMEYYGTISIGTPPQDFTVVFDTGSSNLWVPSVSC-TSPACQSHQMFNPSQSSTYKSTGQNLSIHYGTGDMEGTVGCDTVTVASLMDTNQLFGLSTSEPGQFFVYVKFDGILGLGYPSLAADGITPVFD 200          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23
Identity = 56/131 (42.75%), Postives = 79/131 (60.31%), Query Frame = 3
Query:  294 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIE----ATREGSLTFLLARFDGIIGLGFREIAV 671
            L ++ +AQY+G + IG+PPQNF V+FDTGSSNLWVP + C F  I+C  H+R+  +KS++ T  G S EI YG+GS+ G                    +    AT E  +TF+ A+FDGI G+G+  I+V
Sbjct:   61 LSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISV 191          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23
Identity = 57/139 (41.01%), Postives = 82/139 (58.99%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+++    S+T+    +   I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+D +W
Sbjct:   64 PLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISASGATPVFDNLW 200          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23
Identity = 59/139 (42.45%), Postives = 82/139 (58.99%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            PL N++D +YFG IGIG+P Q F+VIFDTGSSNLWVPS  C  S +C  H+R+  ++S+TY    ++  I YG+GS++G                  F +  T  GS  +  + FDGI+GL +  I+   A PV+D IW
Sbjct:   66 PLVNYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYC-SSPACTNHNRFNPQESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLY-YSPFDGILGLAYPSISSSGATPVFDNIW 202          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.860e-23
Identity = 54/133 (40.60%), Postives = 82/133 (61.65%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPV 689
            P+ N++D+ YFGEI IG+PPQNF V+FDTGSSNLWVPS+ C  S +C  H+R+   +S+T+T  G++  ++YGSGS++                   F  +  E +  F  + FDGI+G+ +  +AVG++  V
Sbjct:   66 PITNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQ-SQACSNHNRFSPSQSSTFTNGGQTYTLSYGSGSLTVVLGYDTVTVQNIVVSNQEFGLSESEPTSPFYYSDFDGILGMAYPAMAVGNSPTV 197          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.288e-22
Identity = 57/135 (42.22%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL+N++D  Y G I IG+PPQ FSV+FDTGSS+LWVPS  C  S +C  H  +    S+T+ + GKS ++ YGSG +SGF  Q              F  +  E    F  A FDGI+GL +  IA+     V D
Sbjct:   67 PLRNYLDMVYVGNISIGTPPQQFSVVFDTGSSDLWVPSIYCK-SKACVTHRSFNPSHSSTFHDRGKSIKLEYGSGKMSGFLGQDTVRIGQLTSTGQAFGLSKEETGKAFEHAIFDGILGLAYPSIAIKGTTTVID 200          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PAG2_BOVIN (Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.288e-22
Identity = 61/173 (35.26%), Postives = 89/173 (51.45%), Query Frame = 3
Query:  192 LNAARITKKERYMGGAGVSGVHHRLGDSDEDIL--PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD-IW 701
            +   R T +E+ +    +    +RL  +D  I   PL+N++D  Y G I IG+PPQ F V+FDTGS+NLWVP   C  S +CY H  +  + S+++ E+G    I YGSG I GF                 F  +  E     L   FDGI+GL F  + + D +P++D +W
Sbjct:   24 MKTLRETLREKNLLNNFLEEQAYRLSKNDSKITIHPLRNYLDTAYVGNITIGTPPQEFRVVFDTGSANLWVPCITC-TSPACYTHKTFNPQNSSSFREVGSPITIFYGSGIIQGFLGSDTVRIGNLVSPEQSFGLSLEEYGFDSL--PFDGILGLAFPAMGIEDTIPIFDNLW 193          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22
Identity = 56/135 (41.48%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  291 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWD 695
            PL N+MD +YFG I IG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  +KS+T+    ++  I YG+GS++G                  F  +  E       + FDGI+GL +  I+   A PV+D
Sbjct:   66 PLVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYC-SSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISSSGATPVFD 199          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 3
Query:  282 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSL--TFLLARFDGIIGLGFREIAVGDAVPV 689
            D + L +  +  Y+GE  IG   Q F+ IFDTGS+NLWVPS++C  +I C   + Y S KS TY + G   E+NY SG++SGFFS+              FIE T        + L +FDGI+GLG++++++G   PV
Sbjct:  127 DSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSK-DIVTIANLSFPYKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPV 262          
BLAST of FC931146 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 3
Query:  282 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSL--TFLLARFDGIIGLGFREIAVGDAVPV 689
            D + L +  +  Y+GE  IG   Q F+ IFDTGS+NLWVPS++C  +I C   + Y S KS TY + G   E+NY SG++SGFFS+              FIE T        + L +FDGI+GLG++++++G   PV
Sbjct:  127 DSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSK-DIVTIANLSFPYKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPV 262          
The following BLAST results are available for this feature:
BLAST of FC931146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
PEPE_CHICK3.389e-2340.00Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1[more]
ASP3_CAEEL4.426e-2342.75Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPA_PIG5.780e-2341.01Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
PEPA_CALJA7.549e-2342.45Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPC_MONDO9.860e-2340.60Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
PAG2_PIG1.288e-2242.22Pregnancy-associated glycoprotein 2 OS=Sus scrofa ... [more]
PAG2_BOVIN1.288e-2235.26Pregnancy-associated glycoprotein 2 OS=Bos taurus ... [more]
PEPA_SORUN1.682e-2241.48Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PLM1_PLAFA8.347e-2240.58Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF78.347e-2240.58Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]

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Properties
Property NameValue
Genbank descriptionC34102A02EF PostHarvP1 Citrus clementina cDNA clone C34102A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931146 ID=FC931146; Name=FC931146; organism=Citrus clementina; type=EST; length=710bp
GGAAGTACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGA
AAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTT
ATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTAC
GGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCT
GCAAGAATAACAAAAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGG
CGTGCACCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGA
ACTTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCA
CAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCC
ATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACA
AGTCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATA
AACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGA
AGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAG
AAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTT
GGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACATATG
GTTGAGCAGG
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