FC931147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1B_SCHPO (60S ribosomal protein L1-B OS=Schizosaccharomyces pombe GN=rpl1b PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.900e-60 Identity = 113/208 (54.33%), Postives = 153/208 (73.56%), Query Frame = 1 Query: 61 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 MSK+ ++R + I++ S+E KRNFTET+ELQIGLKNYDPQ+D+RFSG++KLP++PRP M +C+LGDA ++ A+ G+D M V+ Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ V+H + L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+ N+ ++VNFLVSLLKK WQN+ L +KS Sbjct: 1 MSKVSVASVRSNVEQILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPNMAICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLVSLLKKGWQNIGSLVVKS 207
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1A_SCHPO (60S ribosomal protein L1-A OS=Schizosaccharomyces pombe GN=rpl1a PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.233e-60 Identity = 112/208 (53.85%), Postives = 154/208 (74.04%), Query Frame = 1 Query: 61 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 MSK+ +R ++ +I++ S+E KRNFTET+ELQIGLKNYDPQ+D+RFSG++KLP++PRP M +C+LGDA ++ A+ G+D M V+ Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ V+H + L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+ N+ +++NFLVSLLKK WQN+ L +KS Sbjct: 1 MSKVSPANIRSSVETILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPNMSICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHSDDLYGKIIEVKSTIKFQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKGWQNIGSLVIKS 207
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL10A_DICDI (60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.528e-60 Identity = 108/209 (51.67%), Postives = 152/209 (72.73%), Query Frame = 1 Query: 61 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXX-YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 MSK+ SD +R +S + + ++E+ KR F ET+ELQI LKNYD +KD+RFSG +K+ + +PK+ VC+ D QH +EA KIG ++MD+E Y AFLASES+++Q+P+LLGPGLNK GKFPTL+TH E + SK+N+ K+TVKFQLKKVLC+ VAVG++ + E+++ N+ S+NFLVSLLKK WQN++ LY+K+ Sbjct: 1 MSKISSDQVRSIVSQLFKEAQES-KRGFLETVELQINLKNYDTKKDKRFSGQIKIGTVTKPKLSVCVFADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQVPKLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKKGWQNIKTLYVKT 208
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL10A_TRYBR (60S ribosomal protein L10a OS=Trypanosoma brucei rhodesiense GN=RPL10A PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.319e-53 Identity = 107/208 (51.44%), Postives = 142/208 (68.27%), Query Frame = 1 Query: 61 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 MSK+ L EAI ++++ KE R F E+I+LQ+ LKNYDPQKD+RFSGSV+LPH+ RP+M VC+L D H + A+K + M+ E Y AFL SES+IK +PRL+GP +++ GKFPT+ ESL KV E ++TVKFQLKKVLC+G VG++ M E Q+ QNV M++NFLVSLLKKNWQN++ Y+KS Sbjct: 1 MSKIPPALLSEAIQNVLKDRKE---RKFKESIDLQVNLKNYDPQKDKRFSGSVRLPHVCRPRMTVCLLCDLVHEDIAKKNDVPTMNQEELKKLNKNKKLVKKMCNQYDAFLCSESIIKTVPRLVGPHMHRVGKFPTVCAQNESLPDKVLELQSTVKFQLKKVLCLGTCVGHVDMTEDQVRQNVVMAINFLVSLLKKNWQNLKSAYIKS 205
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL10A_PIG (60S ribosomal protein L10a (Fragment) OS=Sus scrofa GN=RPL10A PE=2 SV=3) HSP 1 Score: 177.178 bits (448), Expect = 7.254e-44 Identity = 86/164 (52.44%), Postives = 113/164 (68.90%), Query Frame = 1 Query: 64 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCM 555 SK+ D L EA+ ++ + + N F ET+ELQI LKNYDPQKD+RFSG+V+L PRPK VC LGD QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH + +KV+E K+ VKFQ+K+VLC+ Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRNXXKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCXLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNXDMVAKVDEVKSRVKFQMKEVLCL 165
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL10A_ENTHI (60S ribosomal protein L10a (Fragment) OS=Entamoeba histolytica GN=RPL10A PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.761e-33 Identity = 73/163 (44.79%), Postives = 101/163 (61.96%), Query Frame = 1 Query: 88 REAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNL 576 R+ +++I+ KE +R F ET EL + LKNYDP KD+R G+ KLP++ + KVC+LGDAQ E A+K + +MDV+ Y+ FL S+SV +Q+ ++LGPGLNK GKFP + E L+ K+NE + V QLKKVLCMGV GN+ Sbjct: 6 RQGVATIL---KEKKERKFGETGELHLALKNYDPDKDKRCGGTDKLPNVTKANYKVCVLGDAQACEAAQKENIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQKILGPGLNKGGKFPPPLGKNEDLKVKINELQCQVNSQLKKVLCMGVGGGNV 165
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL10A_CAERE (60S ribosomal protein L10a (Fragment) OS=Caenorhabditis remanei GN=rpl-10a PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.580e-28 Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 208 SGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKK 543 SGS++L HIPRP MKVC+ GD H++EA + M + Y AF+ASES+IKQIPR+LGPGLNKAGKFP++VTH ESL+SK +E +ATVKFQ+KK Sbjct: 1 SGSIRLKHIPRPSMKVCVFGDQHHLDEAAAGNIPAMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKK 112
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_PYRKO (50S ribosomal protein L1P OS=Pyrococcus kodakaraensis GN=rpl1p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 53/201 (26.37%), Postives = 100/201 (49.75%), Query Frame = 1 Query: 88 REAISSIVQYSKETNKRNFTETIELQIGLKNYDPQK-DRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLV-THQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 ++ + ++ + RNFT+T+E+ + LK+ D +K + RF V LPH + K+ ++ D E A+K+GLD + E Y F+A+ ++ +I R LG L K P +V +LE V + K TV+ QLK + +G M+++++ +N +N +++ L++ V+ +Y+K+ Sbjct: 6 QKLVEAVKEAKARAKPRNFTQTVEMAVNLKDVDLRKPENRFKLEVVLPHGRGKEPKIAVIADGAVAEAAKKLGLDVISGEELEELAKSPRQARKLAKKYDFFIAAAPLMPKIGRYLGRYLGPRNKMPVVVPPTMTNLEPIVEKLKKTVRIQLKNNPVVHAPIGTEDMDDEKLAENAEAVLNAIINKLERGENQVKSVYIKT 206
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_PYRAB (50S ribosomal protein L1P OS=Pyrococcus abyssi GN=rpl1p PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 58/211 (27.49%), Postives = 103/211 (48.82%), Query Frame = 1 Query: 61 MSKLQSDALREAISSIVQYSKETNK-RNFTETIELQIGLKNYDPQK-DRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLV-THQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 MS++ D R+ I V+ +K K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D E A ++GLD + Y F+A ++ +I R LG L K P +V +LE V + K TV+ QLK + VG M +++I +N+ +N ++ L++ ++ +Y+K+ Sbjct: 1 MSRMPFD--RQKIVEAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARRLGLDVISSAELEEIAQSPRQARKLAKKYDFFIAEAPLMPKIGRYLGKYLGPRNKMPVVVPPTMSNLEPIVEKLKKTVRIQLKNNPVVHAPVGTEKMSDEEIAENIETVLNAIIGKLERGESQIKSVYVKT 209
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_PYRHO (50S ribosomal protein L1P OS=Pyrococcus horikoshii GN=rpl1p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15 Identity = 58/211 (27.49%), Postives = 103/211 (48.82%), Query Frame = 1 Query: 61 MSKLQSDALREAISSIVQYSKETNK-RNFTETIELQIGLKNYDPQK-DRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLV-THQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 MS++ D R+ I V+ +K K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D E A ++GLD + Y F+A ++ +I R LG L K P +V ++E V + K TV+ QLK + VG M ++Q+ +N+ +N ++ L++ +R +Y+K+ Sbjct: 1 MSRMAFD--RQKIVEAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARRLGLDVISSAELEEIAKSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVPPTMTNIEPIVEKLKKTVRIQLKDNPVVHAPVGTEKMSDEQLAENIEAVLNAIIGKLERGENQIRSVYVKT 209 The following BLAST results are available for this feature:
BLAST of FC931147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931147 ID=FC931147; Name=FC931147; organism=Citrus clementina; type=EST; length=685bpback to top |