FC931147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_PYRFU (50S ribosomal protein L1P OS=Pyrococcus furiosus GN=rpl1p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15 Identity = 56/202 (27.72%), Postives = 96/202 (47.52%), Query Frame = 1 Query: 88 REAISSIVQYSKETNK-RNFTETIELQIGLKNYDPQK-DRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQ-ESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 R+ I V+ +K K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D E A K+GLD + Y F+A ++ +I R LG L K P +V L V + K TV+ QLK + VG M +++I +N+ +N ++ L++ V+ +Y+K+ Sbjct: 5 RQKIVKAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARKLGLDVISSAELEEIASSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVPPTLTDLTPIVEKLKKTVRIQLKNNPVVHAPVGTEKMSDEEIAENIEAVLNAIIGKLERGESQVKSVYVKT 206
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_METB6 (50S ribosomal protein L1P OS=Methanoregula boonei (strain 6A8) GN=rpl1p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13 Identity = 51/200 (25.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 91 EAISSIVQYSKETNKRNFTETIELQIGLKNYD-PQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDY-MDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 EA+++ ++ + KR F+E+I++ I LKN D Q R ++ LP+ K +C++G V +A+ +D + + Y FLA +V+ Q+ R LGP L G+ P + Q + V + +VK + K VG+ +M +Q+ +N+ + + S+L++ NVR +++K+ Sbjct: 9 EAVTTAIE---KAPKRKFSESIDITINLKNIDMAQPKNRIDETILLPNGTGEKTGICVIGRGDIVTQAKDAKVDLILGPDEVERLGGAPREARRVASSYKYFLAETAVMPQVGRFLGPRLGPRGRMPMPIPGQTDIRPIVERLRNSVKIRTKDKTVFSTKVGSTAMTPEQVSENIDAILKRVESVLEQGHLNVRSVFVKT 205
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_METHJ (50S ribosomal protein L1P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl1p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 50/198 (25.25%), Postives = 92/198 (46.46%), Query Frame = 1 Query: 97 ISSIVQYSKETNKRNFTETIELQIGLKNYD-PQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDY-MDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 I ++ + ++ +R FTE++++ I LKN D Q R ++ LPH +K+ +LG V +A + G++ M E + FLA V+ + R LGP L G+ P + + V + +VK + K + + VG +M E++I +N+ + ++S L+ VR +Y+K+ Sbjct: 8 IDALKKAKEQAPERKFTESVDMTINLKNIDMSQPKNRIDETILLPHGNGRVVKIAVLGSGDIVTQARESGVELIMGPEEIERLGGAPREARKIASEHQFFLAETQVMSLVGRWLGPRLGPRGRMPQPIPAGTDIRPIVERLRKSVKIRTKDKMSFSLKVGTTAMSEEEIAENIDAVLKRILSKLEMGDFQVRSVYIKT 205
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_UNCMA (50S ribosomal protein L1P OS=Uncultured methanogenic archaeon RC-I GN=rpl1p PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12 Identity = 51/203 (25.12%), Postives = 90/203 (44.33%), Query Frame = 1 Query: 82 ALREAISSIVQYSKETNKRNFTETIELQIGLKNYD-PQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 A +E + ++ + KRNF+E+++L I LKN D Q R + LP +KV + + AEK G DY+ E + F+A + + I + LG L GK P + Q + + + K ++K + K L +G +M ++I +N+ + L + L+K QN+ +Y+K+ Sbjct: 2 ARKETVEAVKKALASRPKRNFSESVDLAINLKNIDMSQPKNRVDEDIILPSGLGKTIKVAVFAKGEVAVNAEKAGADYVFPPEEIEKLGADKPRAKKLASEVNFFIAETAYMPTIGKRLGTVLGPRGKMPAPLPPQADVTALITRQKKSIKIRSKDRLTFHATIGTETMTPEEIAENIDAIIKRLETKLEKGKQNIHAIYVKT 204
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_METJA (50S ribosomal protein L1P OS=Methanocaldococcus jannaschii GN=rpl1p PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12 Identity = 53/200 (26.50%), Postives = 89/200 (44.50%), Query Frame = 1 Query: 88 REAISSIVQYSKETNK-RNFTETIELQIGLKNYDPQK-DRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLK 681 REA+ V+ ++E K RNFT++ E LK D +K + R V LPH + K+ ++G ++AE++GL + E + F+A ++ I R +G L GK P V +++ V K TV + V VGN M ++QI N+ +N + +K +++ Y+K Sbjct: 3 REALLQAVKEARELAKPRNFTQSFEFIATLKEIDMRKPENRIKTEVVLPHGRGKEAKIAVIGTGDLAKQAEELGLTVIRKEEIEELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVILGPRGKMPKPVPANANIKPLVERLKKTVVINTRDKPYFQVLVGNEKMTDEQIVDNIEAVLNVVAKKYEKGLYHIKDAYVK 202
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_METKA (50S ribosomal protein L1P OS=Methanopyrus kandleri GN=rpl1p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12 Identity = 45/206 (21.84%), Postives = 90/206 (43.69%), Query Frame = 1 Query: 70 LQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYD-PQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 + + L E + +V+YS R F ET+++ + +K D +R V LPH + VC++ + + EAE+ G ++ E + F A ++ + R+LGP L GK V + + + T + +++ + +G +ME +Q+ +N + + S L+K+W + +Y+K+ Sbjct: 3 ITEEDLIEPLRKVVEYSPP---RRFLETVDMIVNVKGVDLSDPSQRIDKEVVLPHGRGKPVNVCVIAEGEMAREAEEAGATVINREKLEELAENVREAKKIARRHEFFYAQVDLMPDVGRVLGPVLGPRGKMAKPVPPNADIRALIERAHRTARVRMRDQPVIHTVIGARNMEPEQLAENAMAVLREITSELEKSWAQIDSVYVKT 205
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_METST (50S ribosomal protein L1P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl1p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 48/205 (23.41%), Postives = 97/205 (47.32%), Query Frame = 1 Query: 76 SDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQK-DRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 + + EA+ +++ SK RNFT++I++ I + + D K + R V LP+ +K+ + + + +AE+ G D + + E Y F+A ++ + R LGP L K P + + E+ + ++T+K ++K + VG+ M E Q+ +N+ ++ L L+K + ++ +YLK+ Sbjct: 2 TQVIEEAVKKVLEESKP---RNFTQSIDVVITINDLDINKPENRLDEEVLLPNGRGKDVKIAFIAEGELAYQAEQAGADLVINKEKLEELGKNRPEAKKLANSYDFFVAQTDLMPTVGRFLGPVLGPRKKMPKPIPASANPETILGRLRSTIKIRVKDQPIIQSIVGSEDMTEAQVAENIDAIMDVLDRNLEKGSKQIKAMYLKT 203
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_METLZ (50S ribosomal protein L1P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl1p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 52/200 (26.00%), Postives = 90/200 (45.00%), Query Frame = 1 Query: 91 EAISSIVQYSKETNKRNFTETIELQIGLKNYD-PQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 + I+++ + +R F E+I++ I LK+ D Q R ++ LP K K+ +LG V +A G+D + + Y FLA +V+ + R LG L GK P + + + V + +VK + K L M V VGN M +++ +N+ V +V L+ N+R +Y+K+ Sbjct: 6 QIINAVTAAITQAPERKFQESIDITINLKHVDMAQPKNRIDETILLPQAIGVK-KIAVLGKGDIVSQARNAGVDLIIGPDEIERLGGVPREARKMAGQYDFFLAETAVMPLVGRWLGQRLGPRGKMPQPIPPTQDITPIVERLRNSVKIRSKDRLNMSVKVGNTGMTVEEVSENIDAVVKRVVGRLESGELNIRSVYVKT 204
BLAST of FC931147 vs. ExPASy Swiss-Prot
Match: RL1_CENSY (50S ribosomal protein L1P OS=Cenarchaeum symbiosum GN=rpl1p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 47/197 (23.86%), Postives = 92/197 (46.70%), Query Frame = 1 Query: 97 ISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDRRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVXMSVNFLVSLLKKNWQNVRCLYLKS 684 ++ +++ +KE +KRNFT+T+E + K+ D +K + +V+LP P VC+L A+ D + D +G Y FLA ++ + ++LG L GK PT V +ES + +++V+ + + L + +G+ +M++ + N + L + +NVR + +K+ Sbjct: 7 VARMIKKAKEGDKRNFTQTLEFIMVFKDIDIKKGFAINETVQLPKTSSPST-VCVLASGDMGVRAKNAKADMVVDADGLEKLGTNKRESRKFINRYDFFLADTQLMPVVGKVLGQILGPRGKMPTPVAFNAPIESFLERFRSSVRVRARASLSLSCKIGDETMDDADLVANAMAVYGTVEKKLPQGSKNVRQIMVKT 202 The following BLAST results are available for this feature:
BLAST of FC931147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931147 ID=FC931147; Name=FC931147; organism=Citrus clementina; type=EST; length=685bpback to top |