FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CHLPD (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++KPL DRV+VK EEKT GG+ +P T + KPQ GEVVAVG GK + L++ +K G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEVSVEGEDYLIMRESDIFAILD 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 46/92 (50.00%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 IKPLGDRV+++I EEKT GI LP TA+ KPQ G+VVAVG+G+ + ++ V+ G ++I+SKYAGTE++++G +LILRE D++ ++ Sbjct: 2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_GEOUR (10 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++P+ DR++VK E KT GGIF+P TA+ KP GEVVAVG GK K L + VK G +V++ KY+GTE++ G + LI+REDD++G++E Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIKVEGQDFLIMREDDILGVIE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_GEOMG (10 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19 Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PL DR+LVK E+ T GGIF+P TA+ KPQ GE+VAVG GK K + I +K G +V++ KYAGT+++ G + LI+REDD++G++E Sbjct: 3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIKVEGEDFLIMREDDILGVIE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_DESAA (10 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PL DR+LVK E KT GGI +P TA+ KP GE+VAVG G+ TK+ + VK G +V++ KY+GTE++ G +LI+REDDV+GI++ Sbjct: 3 LQPLADRILVKRLAEETKTKGGIIIPDTAKEKPAEGEIVAVGPGRNAEDGTKIALEVKVGDRVLFGKYSGTEVKIEGEEYLIMREDDVLGIVQ 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CLOAB (10 kDa chaperonin OS=Clostridium acetobutylicum GN=groS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 I+PLGDRV++K EE T GI LPS+A+ KPQ EVVAVG G V ++ + VK G +V +SKY+GTE++ + LILR+DD++GI+E Sbjct: 3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGVVDGKEIQMQVKTGDKVFFSKYSGTEIKVDNEELLILRQDDILGIVE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LACPL (10 kDa chaperonin OS=Lactobacillus plantarum GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19 Identity = 46/91 (50.55%), Postives = 69/91 (75.82%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 559 +KPLGDRV+++ + EE+T GGI + + A+ KPQ+G+VVAV +G+ + TK+D SVK G QV++ KYAGTE+++ GA +L+L E D+V I Sbjct: 2 LKPLGDRVILQQQEEEEQTIGGIVIANNAKEKPQSGKVVAVNDGRVLDNGTKVDPSVKVGDQVLFDKYAGTEVKYQGAKYLVLHEKDIVAI 92
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CLOB8 (10 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +IKPLG+RV++K EEKT GI L TA+ +PQ EVVAVG G V ++ + VK G +V+YSKYAGTE++ +G + IL++DD++ I+E Sbjct: 2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAVVDGNRVAMEVKVGDKVLYSKYAGTEVKVDGEEYTILKQDDILAIVE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CHLPB (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groS PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++KPL DRV+VK EEKT GG+++P T + KPQ GEVVAVG GK + L++ V G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEVAVEGEDYLIMRESDIFAILD 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BACCN (10 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19 Identity = 43/92 (46.74%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +KPLGDRV++++ EEKT GI LP TA+ KPQ G+V+AVG G+ + ++ + V G ++I+SKYAGTE+++ G ++LILRE D++ ++ Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |