FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH103_RHIME (10 kDa chaperonin 3 OS=Rhizobium meliloti GN=groS3 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 37/93 (39.78%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 + +PL DRV+++ ++ GGI +P TA+ KPQ GEV+AVG G KL + VK G +++ K++GTE++ +G + LI++E D++GI+ Sbjct: 2 TFRPLLDRVVIRRAEGNTQSKGGIIIPDTAKEKPQEGEVIAVGPGSRDESGKLIPLDVKIGDTILFGKWSGTEVKIDGEDLLIMKESDIMGIV 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_WOLWR (10 kDa chaperonin OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=groS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13 Identity = 37/94 (39.36%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 S+ L D VL IK + E+ GGI LPS+A+ KP GEV+A+GEG + ++ ++VK G +V Y ++AGTE+E N ++++E D++ +++ Sbjct: 5 SLNVLDDSVL--IKPISEEKQGGIVLPSSAEKKPTKGEVIAIGEGSRNSSGERVTLTVKAGDKVFYRQWAGTEIEHNDEKLIVMKESDILAVIK 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BORA1 (10 kDa chaperonin OS=Bordetella avium (strain 197N) GN=groS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.375e-13 Identity = 37/94 (39.36%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +++PL DRV+VK E KT GI +P +A KP GEV+AVG GK K L + +K G +V++ KYAG ++ +G L++RE++++ +++ Sbjct: 2 ALRPLHDRVIVKRLDNERKTASGIVIPDSAAEKPDQGEVLAVGPGKKTEDGKILPVDLKVGDKVLFGKYAGQGVKVDGEELLVIREEEILAVIQ 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_DIAST (10 kDa chaperonin OS=Diaphorobacter sp. (strain TPSY) GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +++PL DRV+VK E T GI +P A KP GEV+AVG GK K +L ++VK G +V++ KY+G ++ NG L+++EDD+ ++E Sbjct: 2 NLRPLHDRVIVKRIESETTTASGIVIPDNAAEKPDQGEVLAVGPGKKNDKGELIALNVKVGDRVLFGKYSGQTVKVNGDELLVMKEDDLFAVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BURVI (10 kDa chaperonin OS=Burkholderia vietnamiensis GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++PL DRV+VK E KT GI +P A KP GEV+A+G GK K L + VK G +V++ KYAG ++ +G L++RE+D++ ++ Sbjct: 2 NLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAIGPGKRDDKGALIALDVKVGDRVLFGKYAGQTVKVDGQELLVMREEDIMAVV 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BURP8 (10 kDa chaperonin OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++PL DRV+VK E KT GI +P A KP GEV+AVG GK K + + VK G +V++ KYAG ++ +G L++RE+D++ ++ Sbjct: 2 NLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVKVGDRVLFGKYAGQTVKVDGNELLVMREEDIMAVV 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BURCE (10 kDa chaperonin OS=Burkholderia cepacia GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13 Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++PL DRV+VK E KT GI +P A KP GEV+A+G GK K + + VK G +V++ KYAG ++ +G L++RE+D++ ++ Sbjct: 2 NLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAIGPGKRDDKGAPIALDVKVGDRVLFGKYAGQTVKVDGQELLVMREEDIMAVV 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_AMOPS (10 kDa chaperonin OS=Amoeba proteus symbiotic bacterium GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13 Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 I+PL DRV+V+ E T G I +P +A KP GE++A+G GK + + VK G V++ KY+GTE++ G +++REDD++G++E Sbjct: 3 IRPLHDRVVVRRLEEERTTAGWIVIPDSATEKPMRGEIIAIGAGKILDNGDVRAFVVKVGDVVLFGKYSGTEVKVAGQELVVMREDDIMGVIE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_ACISJ (10 kDa chaperonin OS=Acidovorax sp. (strain JS42) GN=groS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +++PL DRV+VK E T GI +P A KP GEV+AVG GK K +L ++VK G +V++ KY+G ++ NG L+++EDD+ ++E Sbjct: 2 NLRPLHDRVIVKRIESETTTASGIVIPDNAAEKPDQGEVLAVGPGKKNDKGELIALNVKVGDRVLFGKYSGQTVKVNGDELLVMKEDDLFAVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH101_RHILO (10 kDa chaperonin 1 OS=Rhizobium loti GN=groS1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13 Identity = 34/92 (36.96%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 293 KPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +PL DRV+++ + K+ GGI +P A+ KPQ GEV+AVG G + + + VK G +++ K++GTE++ +G + LI++E D++G+++ Sbjct: 4 RPLHDRVVIRRAEGDTKSKGGIIIPDNAKEKPQEGEVIAVGPGARDENGALVPLDVKAGDLILFGKWSGTEVKIDGEDLLIMKEADIMGVID 95 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |