FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_TREPA (10 kDa chaperonin OS=Treponema pallidum GN=groS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12 Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 I PL DRVLVK E KT GI +P TAQ K Q+G V+AVG K+ +SV G +V++ KYAG ++ +G HL+L+ D++ ++E Sbjct: 3 IIPLADRVLVKTDKSETKTASGIIIPDTAQEKMQSGTVIAVGS----DSEKIKVSV--GQRVMHDKYAGNPVKIDGEEHLLLKGADILAVIE 88
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_POLSJ (10 kDa chaperonin OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=groS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12 Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PL DRV+VK E KT GI +P +A KP GEV+AVG GK K L ++VK G +V++ KY+G ++ +G L+++E+D+ ++E Sbjct: 3 LRPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGDLSPMAVKIGDRVLFGKYSGQTVKVDGDELLVMKEEDLFAVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_FINM2 (10 kDa chaperonin OS=Finegoldia magna (strain ATCC 29328) GN=groS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12 Identity = 38/94 (40.43%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 287 SIKPLGDR-VLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++KP+GDR VL K + EEKT GI LPS+A+ P EV+A+G + K+ ++K G +VIYSKYAGTE++ ++++++ +D++ ++E Sbjct: 2 NLKPIGDRLVLKKQEKEEEKTFSGIVLPSSAKEAPVYAEVLAIGS-EVEEDEKMKGNIKVGDKVIYSKYAGTEIKLEDTDYILVKYEDILAVVE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_TREPR (10 kDa chaperonin OS=Tremblaya princeps GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12 Identity = 36/95 (37.89%), Postives = 61/95 (64.21%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 + I+PLGDRV+VK E KT GI +P +A K G VVA+G GK + ++ + V+ G +V++ KYAG ++ + + +++RE+D+V ++E Sbjct: 2 SKIRPLGDRVVVKRSEDETKTPCGIVIPDSAAEKQDQGTVVALGPGKKDSEGARVPMEVRLGDRVLFGKYAGQSIKVDDEDLMVMREEDIVAVIE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_FERNB (10 kDa chaperonin OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.539e-12 Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KPLG+R+L+K E+KT GGI LP A+ KP E+V VGK D +K G +VIY+KY+GTE++ + +++I+ D++ +E Sbjct: 3 VKPLGERLLIKPIIEEKKTAGGIVLPDAAKEKPMKAEIV------EVGKLPEDCQLKVGDKVIYNKYSGTEIKIDDEDYIIIDVSDILAKIE 88
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_HAEPS (10 kDa chaperonin OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=groS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 I+PL D+V++K + +E K+ GGI L +A TK G V+AVG G+T+ T L ++VK G VI+++Y E + +G LIL ED+++ I+E Sbjct: 3 IRPLHDKVILKREEIETKSAGGIVLTGSAATKSTRGTVIAVGNGRTLDNGTVLPLNVKVGDVVIFNEYGVKEEKIDGETVLILSEDNILAIVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CHLFF (10 kDa chaperonin OS=Chlamydophila felis (strain Fe/C-56) GN=groS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 IKPLGDR+LVK + + + GGI LP TA+ K EV+A+G GK + L VK G V+ KYAG EL G ++I++E +V+ +L Sbjct: 10 IKPLGDRILVKREEEDTTSHGGIILPDTAKKKQDRAEVLALGTGKRDKDGQILPFEVKVGDIVLIDKYAGQELTIEGEEYVIVQESEVMAVL 101
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_THEM4 (10 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12 Identity = 36/92 (39.13%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PLG R+L+K E++T+GGI LP TA+ KP EVVAVG D+ + G +VI+SKY+GTE++ +++I+ +D++ +E Sbjct: 3 VRPLGARLLIKPIQEEKRTEGGIVLPDTAKEKPMKAEVVAVG-----NLEDSDVDIVVGDKVIFSKYSGTEIKIEDDDYIIIDVEDILAKIE 89
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAES (10 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 34/93 (36.56%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KPLG+RV+++ K E+ T GI L +A+ K G ++AVG+G+ + T++ V G +++ +YAGTE++ +LIL E+D++ I+E Sbjct: 2 LKPLGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGDKTYLILNEEDILAIIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAEQ (10 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 34/93 (36.56%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KPLG+RV+++ K E+ T GI L +A+ K G ++AVG+G+ + T++ V G +++ +YAGTE++ +LIL E+D++ I+E Sbjct: 2 LKPLGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGDKTYLILNEEDILAIIE 94 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |