FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LISMC (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 559 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + TK + V G VI++KY+GTE+ + G ++LILRE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LISIN (10 kDa chaperonin OS=Listeria innocua GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 559 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + TK + V G VI++KY+GTE+ + G ++LILRE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LACRJ (10 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KPLGDRV++K +T EEKT GGI L S + KP G+V+AVGEG+T+ KL +VK G +V++ KYAG E+E+NG L++ D+V I+E Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LACRD (10 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KPLGDRV++K +T EEKT GGI L S + KP G+V+AVGEG+T+ KL +VK G +V++ KYAG E+E+NG L++ D+V I+E Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_GEOLS (10 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PL DR++VK EEKT GG+F+P TA+ KPQ GEV+AVG GK + K + VK G +++ KYAGTE++ +G L++REDDV+ ++E Sbjct: 3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTEVKVDGDEFLMMREDDVLAVIE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CYAP4 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GE+VAVG GK ++ + VK G +V+YSKYAGT+++ +++L E D++ I+ Sbjct: 9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAIV 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BACP3 (10 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +KPLGDR+++++ EEKT GI LP TA+ KPQ G VVAVG G+ + ++ K G +VI+SKYAGTE++++G +LILRE D++ ++ Sbjct: 2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVKYDGKEYLILRESDILAVI 93
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BACHK (10 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +KPLGDRV++++ EEKT GI LP TA+ KPQ G+V+AVG G+ + ++ + V G +I+SKYAGTE+++ G ++LILRE D++ ++ Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BACCZ (10 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +KPLGDRV++++ EEKT GI LP TA+ KPQ G+V+AVG G+ + ++ + V G +I+SKYAGTE+++ G ++LILRE D++ ++ Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BACCQ (10 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +KPLGDRV++++ EEKT GI LP TA+ KPQ G+V+AVG G+ + ++ + V G +I+SKYAGTE+++ G ++LILRE D++ ++ Sbjct: 2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |