FC931239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 6.831e-83 Identity = 151/222 (68.02%), Postives = 177/222 (79.73%), Query Frame = 1 Query: 13 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPNLR 678 M+ VSAIGFEG+EKRLE+SFFEP FADP G+GLR LSK+QLDE L PAECTIV+SLSNE++DSYVLSESSLFVY YK+IIKTCGTTKLL SIP I VRSVRYTRG FIF GAQ +PHRSFSEEV+VLD +FGK G S A++MG D ++WHVYSA A + ++PVYT+EMCMT L+R +ASVFYKTN SSA +T++SG+R ILPN R Sbjct: 1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVDSYVLSESSLFVYAYKIIIKTCGTTKLLKSIPPILKLADSLSLTVRSVRYTRGCFIFPGAQSYPHRSFSEEVSVLDNYFGKLGSGSKAYIMGGSDKQQKWHVYSACAASTRTLDPVYTMEMCMTSLNRDKASVFYKTNSSSATSVTDNSGLRDILPNSR 222 HSP 2 Score: 25.0238 bits (53), Expect = 6.831e-83 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 Query: 672 SEICDFEFDP 701 S ICDFEFDP Sbjct: 221 SRICDFEFDP 230
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.411e-82 Identity = 153/218 (70.18%), Postives = 179/218 (82.11%), Query Frame = 1 Query: 19 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPN 672 + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK LDEIL PAECTIV SL+NE +DSYVLSESSLFVY YK+IIKTCGTTKLL SIP I V+SVRYTRGSFIF GAQ FPHRSFSEEVAVLD +F K G S A VMGSP ++WHVYSA+AE ++ +PVYTLEMCMTGLD+++ASVF+K+ +SAA+MTE SGIRKILP+ Sbjct: 16 MTISAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAHLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTTKLLNSIPPILRLAETLFLDVKSVRYTRGSFIFPGAQSFPHRSFSEEVAVLDNYFAKLGAGSKAIVMGSPGKPQKWHVYSATAET-NYDDPVYTLEMCMTGLDKEKASVFFKSQSASAAVMTESSGIRKILPD 232
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 4.105e-82 Identity = 152/221 (68.78%), Postives = 177/221 (80.09%), Query Frame = 1 Query: 19 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEA----GSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 + VSAIGFEGYEKRLEVSFFEP +F D G+GLR+L K Q+DEIL PAECTIVSSLSN+ LDSYVLSESSLF++PYK+IIKTCGTTKLL SI + V+SVRYTRGSF+ G QPFPHR+FSEEV+VLDGHF K G+ S A++MG D TK+WHVYSASA A G++ N VYTLEMCMTGLD+++ASVFYK SSA MT++SGIRKILP Sbjct: 1 MSVSAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLPSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPARNGNGNNNNNVYTLEMCMTGLDKEKASVFYKNESSSAGSMTDNSGIRKILP 221
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 9.146e-82 Identity = 155/217 (71.43%), Postives = 175/217 (80.65%), Query Frame = 1 Query: 28 SAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVN---PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 SAIGFEG+EKRLE+SFF PG DP RGLRSL+K+QLD+ L PAECTIVSSLSN+ LDSYVLSESSLFVYPYK+IIKTCGTTKLLLSIP I V+SVRYTRGSFIF GAQ FPHRSF+EEV VLD HFGK GM S A+VMG + ++WHVYSASAE+ + V PVYTLEM MTGL ++ ASVF+K+ SSAA+MTEDSGIRKILP Sbjct: 3 SAIGFEGFEKRLEISFFNPGPSVDPVARGLRSLTKNQLDKFLAPAECTIVSSLSNDLLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILELSGELSLTVQSVRYTRGSFIFPGAQTFPHRSFTEEVMVLDSHFGKLGMCSNAYVMGGAEKDQKWHVYSASAESANLVTQTAPVYTLEMSMTGLSKRNASVFFKSESSSAAVMTEDSGIRKILP 219
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.194e-81 Identity = 154/218 (70.64%), Postives = 179/218 (82.11%), Query Frame = 1 Query: 19 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPN 672 + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK QLDEIL PAECTIV SL+NE +DSYVLSESSLFVY YK+IIKTCGTTKLL SI I V+SVRYTRGSFIF GAQ +PHRSFSEEVAVLD +FG G S AFVMGSP ++WHVYSA+AE S+ +PVYTLEMCMTGLD+ +ASVF+K+ +SAA+MTE SGIRKILP+ Sbjct: 25 MALSAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTTKLLHSILPILTLADGLCLDVKSVRYTRGSFIFPGAQSYPHRSFSEEVAVLDKYFGNLGTGSKAFVMGSPAKPQKWHVYSATAEP-SYDDPVYTLEMCMTGLDKGKASVFFKSESASAAVMTETSGIRKILPD 241
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 2.162e-81 Identity = 152/218 (69.72%), Postives = 174/218 (79.82%), Query Frame = 1 Query: 19 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPN 672 + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+K QLDEIL PAECTIVSSL+NE +DSYVLSESSLFVY YK+IIKTCGTTKLLLSIP I VRSVRYTRGSFIF GAQ FPHR FSEEVAVLDG FGK G S A+++G D + WH+Y AS+++ S VYTLEMCMTGLDR++ASVF+K SAA MT +SGIRKIL N Sbjct: 1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKLIIKTCGTTKLLLSIPPILKLADSISLNVRSVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGFFGKLGSGSMAYILGGSDEAQNWHIYCASSDSVSPEGSVYTLEMCMTGLDREKASVFFKEQTGSAAEMTVNSGIRKILRN 218 HSP 2 Score: 24.2534 bits (51), Expect = 2.162e-81 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 672 SEICDFEFDP 701 SEICDF+F+P Sbjct: 219 SEICDFDFEP 228
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_SPIOL (S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.064e-80 Identity = 148/218 (67.89%), Postives = 174/218 (79.82%), Query Frame = 1 Query: 19 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPN 672 + +SAIGFEG+EKRLE++FFEP +F DP G+GLR+L K QLDEIL PAECTIV SL+NE +DSYVLSESSLF+Y YK+IIKTCGTTKLL +IP I V+SVRYTRGSFIF GAQ + HRSFSEEVAVLDG+FGK S AFVMG P ++WHVYSASAE S PVYTLEMCMTGL +++ASVF+K+ +AA+MTE SGIRKILP+ Sbjct: 1 MAISAIGFEGFEKRLEITFFEPSIFVDPEGKGLRALCKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFIYAYKIIIKTCGTTKLLRAIPPILRLAGKLSLDVKSVRYTRGSFIFPGAQSYAHRSFSEEVAVLDGYFGKLAAGSKAFVMGDPAKPQKWHVYSASAETISFEEPVYTLEMCMTGLKKEKASVFFKSQSPNAAVMTESSGIRKILPD 218 HSP 2 Score: 22.7126 bits (47), Expect = 1.064e-80 Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 672 SEICDFEFDP 701 S+ICDF+F+P Sbjct: 219 SKICDFDFEP 228
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 2.253e-80 Identity = 148/218 (67.89%), Postives = 175/218 (80.28%), Query Frame = 1 Query: 19 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHV-NPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 + +SAIGFEGYEKRLEV+FFEP +F D G GLR+L+K QLDEIL PA CTIVSSLSN+ LDSYVLSESS FVYPYKVIIKTCGTTKLLLSIP + V+SV+YTRGSF+ G QPFPHRSFSEEV+VLDGHF + G++S A++MG+ D TK+WHVY+ASA+ S+ N VYTLEMCMTGLDR++A+VFYK MT++SGIRKILP Sbjct: 1 MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNVYTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILP 218
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.596e-78 Identity = 149/220 (67.73%), Postives = 175/220 (79.55%), Query Frame = 1 Query: 19 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHV-NPVYTLEMCMTGLDRKRASVFYKTNESSA--AMMTEDSGIRKILP 669 + +SAIGFEGYEKRLEVSFFEP F D G GLR+L++ QLDEIL PA C IVSSLSN++LDSYVLSESS FVYPYKVIIKTCGTTKLLLSIP + V+SV+YTRGSF+ G QPFPHRSFSEEV+VLDGHF K G++S A++MG+ D K+WHVY+ASA+ S N VYTLEMCMTGLD+++ASVFYK NE+ MT++SGIRKILP Sbjct: 1 MALSAIGFEGYEKRLEVSFFEPSFFQDSKGLGLRALTRSQLDEILTPAACEIVSSLSNDHLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQPFPHRSFSEEVSVLDGHFTKLGLNSVAYLMGNDDENKKWHVYAASAQTSSDCNNNVYTLEMCMTGLDKEKASVFYK-NETGGENGSMTDNSGIRKILP 219
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM1_BRAJU (S-adenosylmethionine decarboxylase proenzyme 1 OS=Brassica juncea GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.785e-77 Identity = 145/219 (66.21%), Postives = 172/219 (78.54%), Query Frame = 1 Query: 19 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEA--GSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 + +SAIGFEG +RLEVSFFEP +F D G+GLR+LSK Q+DEIL PAECTIVSSLSN+ LDSYVLSESSLF++PYK+IIKTCGTTKLLLSI + V+SVRYTRGSF+ G QPFP R+ SEEV+VLDGHF K G+ S A++MG D TK+WHVYSASA A + N VYTLEMCM+GLD+ +ASVF+K SSA MT++SGIRKILP Sbjct: 1 MSLSAIGFEGLRERLEVSFFEPSLFLDTHGKGLRALSKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLLSIEPLLRLAGGVSLEVKSVRYTRGSFLCPGGQPFPQRNLSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPAKNSNGDNNVYTLEMCMSGLDKDKASVFFKNESSSAGSMTDNSGIRKILP 219 The following BLAST results are available for this feature:
BLAST of FC931239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931239 ID=FC931239; Name=FC931239; organism=Citrus clementina; type=EST; length=701bpback to top |