FC931239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 7.986e-63 Identity = 126/226 (55.75%), Postives = 159/226 (70.35%), Query Frame = 1 Query: 13 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNE----SSAAMMTEDSGIRKILPNL 675 MA PVSAIGFEGYEKRLE++F E +FADP GRGLR+LS+ Q+D +L A CTIVS LSN+ DSYVLSESSLF+Y K++IKTCGTT LLL+IP I + +V+Y+RG FIF GAQP PHRSFSEEV VL+ +FG A+V+G P ++WH+Y A+ + P+ TLEMCMTGLD+ +ASVF+KT+ S A MT+ SGI I+P + Sbjct: 1 MAAPVSAIGFEGYEKRLEITFSEASIFADPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSQKIVIKTCGTTMLLLTIPRILELAEELCMPLAAVKYSRGMFIFPGAQPAPHRSFSEEVDVLNRYFGHLNSGGNAYVIGDPAKPGQKWHIYYATEQP---EQPMVTLEMCMTGLDKTKASVFFKTHADGHVSCAKEMTKLSGISDIIPEM 223 HSP 2 Score: 22.3274 bits (46), Expect = 7.986e-63 Identity = 6/9 (66.67%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 675 EICDFEFDP 701 E+CDF+F+P Sbjct: 224 EVCDFDFEP 232
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.358e-62 Identity = 126/225 (56.00%), Postives = 159/225 (70.67%), Query Frame = 1 Query: 16 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKT----NESSAAMMTEDSGIRKILPNL 675 A PVSAIGFEGYEKRLE++F E VF DP GRGLR+LS+ Q+D +L A CTIVS LSN+ DSYVLSESSLF+YP K++IKTCGTTKLLL+IP I + +V+Y+RG+FIF GAQP PHRSFSEEVA L+ +FG A+V+G P ++WHV+ A+ P+ LEMCMTGLD+K+A VF+KT N + A MT+ SGI +I+P + Sbjct: 9 ASPVSAIGFEGYEKRLEITFSEAPVFVDPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYPLKIVIKTCGTTKLLLTIPRILELAEELSMPLAAVKYSRGTFIFPGAQPAPHRSFSEEVAALNRYFGGLKSGGNAYVIGDPARPGQKWHVFYATEYP---EQPMVNLEMCMTGLDKKKACVFFKTNADGNTTCAKEMTKLSGISEIIPEM 230 HSP 2 Score: 22.7126 bits (47), Expect = 1.358e-62 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 675 EICDFEFDP 701 EICDF+F+P Sbjct: 231 EICDFDFEP 239
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.010e-62 Identity = 126/223 (56.50%), Postives = 158/223 (70.85%), Query Frame = 1 Query: 22 PVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKT----NESSAAMMTEDSGIRKILPNL 675 PVSAIGFEGYEKRLE++F E VFADP GRGLR+LS+ Q+D +L A CTIVS LSN+ DSYVLSESSLF+Y K++IKTCGTTKLLL+IP I + +V+Y+RG FIF AQP PHRSFSEEVAVL+ +FG A+V+G P ++WH+Y A+ P+ TLEMCMTGLD+++ASVF+KT + S A MT+ SGI I+P + Sbjct: 11 PVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGMFIFPSAQPAPHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHP---EQPMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEM 230 HSP 2 Score: 22.7126 bits (47), Expect = 3.010e-62 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 675 EICDFEFDP 701 EICDF+F+P Sbjct: 231 EICDFDFEP 239
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 3.010e-62 Identity = 126/223 (56.50%), Postives = 158/223 (70.85%), Query Frame = 1 Query: 22 PVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKT----NESSAAMMTEDSGIRKILPNL 675 PVSAIGFEGYEKRLE++F E VFADP GRGLR+LS+ Q+D +L A CTIVS LSN+ DSYVLSESSLF+Y K++IKTCGTTKLLL+IP I + +V+Y+RG FIF AQP PHRSFSEEVAVL+ +FG A+V+G P ++WH+Y A+ P+ TLEMCMTGLD+++ASVF+KT + S A MT+ SGI I+P + Sbjct: 11 PVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGMFIFPSAQPAPHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHP---EQPMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEM 230 HSP 2 Score: 22.7126 bits (47), Expect = 3.010e-62 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 3 Query: 675 EICDFEFDP 701 EICDF+F+P Sbjct: 231 EICDFDFEP 239
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_DICDI (S-adenosylmethionine decarboxylase proenzyme OS=Dictyostelium discoideum GN=amd1 PE=3 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28 Identity = 83/218 (38.07%), Postives = 111/218 (50.92%), Query Frame = 1 Query: 37 GFEGYEKRLEVSFFE------PGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPV-YTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 GFEG EK+L++ F + P GLR++ K + +L A CTI+S SN+++DSYVLSESSLFVYP + +IKTCGTT LL I + V V ++R + Q FPH SFS+EV L+ F D A+VMG N W++Y A + T E+ M LD F+K SA T +SGI +LP Sbjct: 28 GFEGPEKKLDIRFGPISKGSVKSIAGSPSKVGLRTIDKEKWQTVLDSARCTIISQTSNDHMDSYVLSESSLFVYPRRAMIKTCGTTTLLHLIAKMVQVGKECGLEVEMVVFSRKNLNQPSKQVFPHCSFSDEVNFLNKIF-----DGQAYVMGDV-NKDHWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLP 239
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_CAEEL (S-adenosylmethionine decarboxylase proenzyme OS=Caenorhabditis elegans GN=smd-1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26 Identity = 80/214 (37.38%), Postives = 113/214 (52.80%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYS--ASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LE+ F R LR + + ++D +L A C I+ S NE +DSYVLSESSLF+ +VI+KTCGTT+LL ++P I V+SV Y+R +F+ QP H++F EV LD F +D A+ +GS RW++Y+ E +H P +TLE+ M+ LD + F K +GI KI+P Sbjct: 25 FEGAEKLLELWFCSS---TQNETRSLRIIPREEIDAMLDIARCKILHSKHNESIDSYVLSESSLFISDNRVILKTCGTTRLLAALPVIMQLAGAYAGLDQVQSVYYSRKNFLRPDLQPSLHKNFDAEVEYLDSFF----VDGHAYCLGSL-KQDRWYLYTFHREVEFPAHKQPDHTLEILMSDLDEEVLHKFTKDYAVDGNDCFMRAGIDKIIP 230
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_ONCVO (S-adenosylmethionine decarboxylase proenzyme OS=Onchocerca volvulus GN=smd-1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25 Identity = 78/212 (36.79%), Postives = 107/212 (50.47%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LE+ F + G LR++ +L +L A+C I+ S SNE +DSYVLSESS+F+ +++I+KTCGTT+LL +I I V SV Y+R +F+ QP+PH SF EV L+ HF +A+ +G P RW +Y+ P +TLE+ M GL S F S I ILP Sbjct: 30 FEGAEKLLEIWFDKN----QNGATSLRNIPYSELVSMLDIAQCRILHSKSNECMDSYVLSESSMFISDFRIILKTCGTTRLLHAIERILHIAKIYCNMDNVVSVFYSRKNFMHPEKQPYPHSSFETEVDYLEEHFA----GGSAYCIG-PQRQDRWFLYTMVTPQAVFPFPEHTLEILMNGLPEDVLSTFSPNVSKDGKDCRMKSAINTILP 232
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_RAT (S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus GN=Amd1 PE=2 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 73/213 (34.27%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LEV F A G LR++ + + D +LK +C+I+S + ++YVLSESS+FV + I+KTCGTT LL ++ + ++S Y+R +F+ Q +PHR+F EE+ L+ F + A+ MG N+ W++Y+ +N P TLE+ M+ LD FY + +A +T +SGIR ++P Sbjct: 7 FEGTEKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIF----PNGAAYCMGRM-NSDCWYLYTLDLPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIP 214
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_MESAU (S-adenosylmethionine decarboxylase proenzyme OS=Mesocricetus auratus GN=AMD1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 73/213 (34.27%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LEV F A G LR++ + + D +LK +C+I+S + ++YVLSESS+FV + I+KTCGTT LL ++ + ++S Y+R +F+ Q +PHR+F EE+ L+ F + A+ MG N+ W++Y+ +N P TLE+ M+ LD FY + +A +T +SGIR ++P Sbjct: 7 FEGTEKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIF----PNGAAYCMGRM-NSDCWYLYTLDFPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIP 214
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_BOVIN (S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus GN=AMD1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 73/213 (34.27%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LEV F A+ G LR++ + + D +LK +C+I+S + ++YVLSESS+FV + I+KTCGTT LL ++ + ++S Y+R +F+ Q +PHR+F EE+ L+ F + A+ MG N+ W++Y+ +N P TLE+ M+ LD FY + +A +T +SGIR ++P Sbjct: 7 FEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIF----PNGAAYCMGRM-NSDCWYLYTLDFPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIP 214 The following BLAST results are available for this feature:
BLAST of FC931239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931239 ID=FC931239; Name=FC931239; organism=Citrus clementina; type=EST; length=701bpback to top |