FC931243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP2_CHICK (Cysteine and glycine-rich protein 2 OS=Gallus gallus GN=CSRP2 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15 Identity = 52/176 (29.55%), Postives = 78/176 (44.32%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGTPKTVRVER---------SADQVTNSRVSSMFA---GTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 G KC AC +TVY +++ D + +H+ CF C C+ L + + +YCK + + + G GT R ER S + T + +S FA G +KC C +VY EKV G +HK CFRC G + + E +YC+ + + F KG Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESTPSPHRPTTNPNTSKFAQKFGGAEKCSRCGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 180
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP2_BOVIN (Cysteine and glycine-rich protein 2 OS=Bos taurus GN=CSRP2 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15 Identity = 47/176 (26.70%), Postives = 77/176 (43.75%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGT------------PKTVRVERSADQVTNSRVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 G KC AC +TVY +++ D + +H+ CF C C+ L + + +YCK + + + G GT P++V+ R S+ + + G + KC C +VY EK+ G +HK CFRC G + + E +YC+ + + F KG Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTNPNTSKFAQKYGGAE-KCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP1_COTJA (Cysteine and glycine-rich protein 1 OS=Coturnix coturnix japonica GN=CSRP1 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15 Identity = 50/174 (28.74%), Postives = 76/174 (43.68%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGTPKTVRVER--------SADQVTNSRVSSMF--AGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 G +KC C+K VY +++ + +HK+CF C CK L + +YCK + + + G GT T + E + + TN S M G D C C + VY EKV G S+HK+CFRC G + + + +YC+ + + F KG Sbjct: 5 GGGKKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPKGYGYGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKG 178
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP1_CHICK (Cysteine and glycine-rich protein 1 OS=Gallus gallus GN=CSRP1 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15 Identity = 50/174 (28.74%), Postives = 76/174 (43.68%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGTPKTVRVER--------SADQVTNSRVSSMF--AGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 G +KC C+K VY +++ + +HK+CF C CK L + +YCK + + + G GT T + E + + TN S M G D C C + VY EKV G S+HK+CFRC G + + + +YC+ + + F KG Sbjct: 5 GGGKKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPKGYGYGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKG 178
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP2_RAT (Cysteine and glycine-rich protein 2 OS=Rattus norvegicus GN=Csrp2 PE=2 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15 Identity = 46/176 (26.14%), Postives = 76/176 (43.18%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGT------------PKTVRVERSADQVTNSRVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 G KC AC +TVY +++ D + +H+ CF C C+ L + + +YCK + + + G GT P++ + R S+ + + G +KC C +VY EK+ G +HK CFRC G + + E +YC+ + + F KG Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRTFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESAQPHRPTTNPNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP2_MOUSE (Cysteine and glycine-rich protein 2 OS=Mus musculus GN=Csrp2 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15 Identity = 46/176 (26.14%), Postives = 76/176 (43.18%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGT------------PKTVRVERSADQVTNSRVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 G KC AC +TVY +++ D + +H+ CF C C+ L + + +YCK + + + G GT P++ + R S+ + + G + KC C +VY EK+ G +HK CFRC G + + E +YC+ + + F KG Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESAQPHRPTTNPNTSKFAQKYGGAE-KCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CRIP2_HUMAN (Cysteine-rich protein 2 OS=Homo sapiens GN=CRIP2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15 Identity = 56/184 (30.43%), Postives = 82/184 (44.57%), Query Frame = 2 Query: 104 KCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYC-KPHFDQLFKMTGS---------LDKSF-EGTPKTVRVERSADQVTN----------SRVSSM--FAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYC-RHHHNQLFTQKG 583 KC C+KTVY +++++ K +HK C +C C TL + +G +C KP + LF G +K EG T +E A + SR SS+ F G + C C K VY EKV G +H+ C RC G ++P + H+ + YC + + LF KG Sbjct: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CRIP2_RAT (Cysteine-rich protein 2 OS=Rattus norvegicus GN=Crip2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15 Identity = 54/184 (29.35%), Postives = 85/184 (46.20%), Query Frame = 2 Query: 104 KCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYC-KPHFDQLF-----KMTGSLDKSFEGTPK---------TVRVERSADQVTN------SRVSSM--FAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYC-RHHHNQLFTQKG 583 KC C+KTVY +++++ K +HK C +C C TL + +G +C KP + LF + G+ +E P V V R+ ++ T+ S+ SS+ F G + C C K VY EKV G +H+ C RC ++P + H+ + YC + + LF KG Sbjct: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCNKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPPTEAPQVTGPIEVPVVRTEERKTSGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCSKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CRIP2_MOUSE (Cysteine-rich protein 2 OS=Mus musculus GN=Crip2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15 Identity = 54/184 (29.35%), Postives = 85/184 (46.20%), Query Frame = 2 Query: 104 KCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYC-KPHFDQLF-----KMTGSLDKSFEGT---------PKTVRVERSADQVTN------SRVSSM--FAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYC-RHHHNQLFTQKG 583 KC C+KTVY +++++ K +HK C +C C TL + +G +C KP + LF + G+ +E P V V R+ ++ T+ S+ SS+ F G + C C K VY EKV G +H+ C RC ++P + H+ + YC + + LF KG Sbjct: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCNKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPQTEAPQVTGPIEVPVVRTEERKTSGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCSKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: LIMC_DICDI (LIM domain-containing protein C OS=Dictyostelium discoideum GN=limC PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14 Identity = 48/172 (27.91%), Postives = 67/172 (38.95%), Query Frame = 2 Query: 107 CKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMT-----GSLDKSFEGTPKTVRVERSADQVTNSRVSSMFAGTQD--------KCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 C C K VY + + A K YHK C +C HC L+L Y +G YCK +D+LF+ G + SFE PK + V + + T++ C C K Y E + +HK CF C + Y E +YC + F G Sbjct: 5 CPTCTKRVYAAEAVKACEKQYHKLCLQCFHCHKILQLGQYSERDGQPYCKTDYDRLFRQAGYRGGGVVADSFEPAPKV----ETTTPVEPTPPPTFLTPTEEVKVQLFPTNCPKCGKKAYFNELKVYNSRDWHKTCFACFSCNKNLVSGQYSEKEGLIYCPRCYQSKFGPSG 172 The following BLAST results are available for this feature:
BLAST of FC931243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931243 ID=FC931243; Name=FC931243; organism=Citrus clementina; type=EST; length=702bpback to top |