FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_BORPA (Lipid A export ATP-binding/permease protein msbA OS=Bordetella parapertussis GN=msbA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 66/223 (29.60%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 28 PSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYT--DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690 P GK++ R + R+ + +S + +VGR+GSGK+TL+ L R V P R+ LS++ QD V+F+ T+ +NV T D ++ +AL L + V + + V +N S GQRQ + + R L+K +L+LDEAT+++D ++ +Q SL + T + IAHR+++V ++D +++L G I E+ Sbjct: 377 PVRGKVEFRAVSHRFPDADRDTVSAVSFLVEPGQTVALVGRSGSGKTTLVNMLPRFVLPDGGDILFDDVPIQDLTLRSLRSHLSLVSQDVVLFDDTIAANVGYGAGGTVDDARVRDALAAANLLEFVDGLPLGIHTPVGQNAARLSGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQASLERLMRGRTTLVIAHRLSTVQNADRIIVLDAGKIVEH 599
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_BORBR (Lipid A export ATP-binding/permease protein msbA OS=Bordetella bronchiseptica GN=msbA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 66/223 (29.60%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 28 PSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYT--DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690 P GK++ R + R+ + +S + +VGR+GSGK+TL+ L R V P R+ LS++ QD V+F+ T+ +NV T D ++ +AL L + V + + V +N S GQRQ + + R L+K +L+LDEAT+++D ++ +Q SL + T + IAHR+++V ++D +++L G I E+ Sbjct: 377 PVRGKVEFRAVSHRFPDADRDTVSAVSFLVEPGQTVALVGRSGSGKTTLVNMLPRFVLPDGGDILFDDVPIQDLTLRSLRSHLSLVSQDVVLFDDTIAANVGYGAGGTVDDARVRDALAAANLLEFVDGLPLGIHTPVGQNAARLSGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQASLERLMRGRTTLVIAHRLSTVQNADRIIVLDAGKIVEH 599
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y2003_STAA8 (Putative multidrug export ATP-binding/permease protein SAOUHSC_02003 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02003 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 59/218 (27.06%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+ID+ + +Y + +L+ I+ + + VG +G GKSTLI + R + + R ++ ++ QD ++F TV+ N+ TDE++ EA D + D++V E G S GQ+Q + + R+ L IL+LDEAT+++D ++++IQ++L D T + +AHR++++ +D ++++ +G I E Sbjct: 338 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1956_STAAR (Putative multidrug export ATP-binding/permease protein SAR1956 OS=Staphylococcus aureus (strain MRSA252) GN=SAR1956 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 59/218 (27.06%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+ID+ + +Y + +L+ I+ + + VG +G GKSTLI + R + + R ++ ++ QD ++F TV+ N+ TDE++ EA D + D++V E G S GQ+Q + + R+ L IL+LDEAT+++D ++++IQ++L D T + +AHR++++ +D ++++ +G I E Sbjct: 338 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1924_STAAC (Putative multidrug export ATP-binding/permease protein SACOL1924 OS=Staphylococcus aureus (strain COL) GN=SACOL1924 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 59/218 (27.06%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+ID+ + +Y + +L+ I+ + + VG +G GKSTLI + R + + R ++ ++ QD ++F TV+ N+ TDE++ EA D + D++V E G S GQ+Q + + R+ L IL+LDEAT+++D ++++IQ++L D T + +AHR++++ +D ++++ +G I E Sbjct: 338 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1866_STAAM (Putative multidrug export ATP-binding/permease protein SAV1866 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1866 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 59/218 (27.06%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+ID+ + +Y + +L+ I+ + + VG +G GKSTLI + R + + R ++ ++ QD ++F TV+ N+ TDE++ EA D + D++V E G S GQ+Q + + R+ L IL+LDEAT+++D ++++IQ++L D T + +AHR++++ +D ++++ +G I E Sbjct: 338 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1847_STAA3 (Putative multidrug export ATP-binding/permease protein SAUSA300_1847 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_1847 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 59/218 (27.06%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+ID+ + +Y + +L+ I+ + + VG +G GKSTLI + R + + R ++ ++ QD ++F TV+ N+ TDE++ EA D + D++V E G S GQ+Q + + R+ L IL+LDEAT+++D ++++IQ++L D T + +AHR++++ +D ++++ +G I E Sbjct: 338 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1806_STAAW (Putative multidrug export ATP-binding/permease protein MW1806 OS=Staphylococcus aureus (strain MW2) GN=MW1806 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 59/218 (27.06%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+ID+ + +Y + +L+ I+ + + VG +G GKSTLI + R + + R ++ ++ QD ++F TV+ N+ TDE++ EA D + D++V E G S GQ+Q + + R+ L IL+LDEAT+++D ++++IQ++L D T + +AHR++++ +D ++++ +G I E Sbjct: 338 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1788_STAAS (Putative multidrug export ATP-binding/permease protein SAS1788 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1788 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 59/218 (27.06%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+ID+ + +Y + +L+ I+ + + VG +G GKSTLI + R + + R ++ ++ QD ++F TV+ N+ TDE++ EA D + D++V E G S GQ+Q + + R+ L IL+LDEAT+++D ++++IQ++L D T + +AHR++++ +D ++++ +G I E Sbjct: 338 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1683_STAAN (Putative multidrug export ATP-binding/permease protein SA1683 OS=Staphylococcus aureus (strain N315) GN=SA1683 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 59/218 (27.06%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+ID+ + +Y + +L+ I+ + + VG +G GKSTLI + R + + R ++ ++ QD ++F TV+ N+ TDE++ EA D + D++V E G S GQ+Q + + R+ L IL+LDEAT+++D ++++IQ++L D T + +AHR++++ +D ++++ +G I E Sbjct: 338 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |