FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDR1_CAEEL (Multidrug resistance protein 1 OS=Caenorhabditis elegans GN=pgp-1 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 61/224 (27.23%), Postives = 122/224 (54.46%), Query Frame = 1 Query: 34 HGKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV----DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 +GK+ ++++ Y P P + L+G+S + + +VG +G GKST++ L R + R++++I+ Q+P +F+ ++ N+ DP T Q+ EA + + + + +++V + G S GQ+Q + + R L++ KIL+LDEAT+++DT ++ ++Q++L + T I IAHR+ +V+++D + ++S+G I E Sbjct: 1074 YGKVIFKNVRFAY-PERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDP-SSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIE 1295 HSP 2 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 57/220 (25.91%), Postives = 111/220 (50.45%), Query Frame = 1 Query: 37 GKIDLRDLQVRYA--PHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEE-YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I + ++ Y P +P +LRG++ + +VG +G GKST+I L R + R ++++ Q+P +F T+ N+ +E T E++ A ++ ++ V + G S GQ+Q + + R L++ KIL+LDEAT+++D ++ ++QQ+L + T I IAHR++++ ++D+++ +G + E Sbjct: 414 GDITVENVHFTYPSRPDVP-ILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVE 632
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_SCHPO (Iron-sulfur clusters transporter atm1, mitochondrial OS=Schizosaccharomyces pombe GN=atm1 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 64/223 (28.70%), Postives = 111/223 (49.78%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G I ++ Y P+ P +L G S P K VG +G GKST+++ LFR + + R + ++PQD +F T+ N+ + ++++I EA K ++ D + +KV E G S G++Q + + R+LLK +IL DEAT+++DT T+ + +++ S T + IAHR+ ++ D D++ +L G + E S Sbjct: 441 GSIQFDNVHFSYNPNRP-ILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYDTDSGKILIDNQRLDQITLNSLRKAIGVVPQDTPLFNDTILYNIGYGNPKASNDEIVEAAKKAKIHDIIESFPEGYQTKVGERGLMISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLIKGSHKTSVFIAHRLRTIKDCDIIFVLEKGRVVEQGS 662
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB6_HUMAN (ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo sapiens GN=ABCB6 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 60/218 (27.52%), Postives = 115/218 (52.75%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYT-DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+I+ ++ YA L+ +S T + +VG +G+GKST+++ LFR + ++ R+ + ++PQD V+F T+ N+ ++++ A + D + ++V E G S G++Q V + R +LK I++LDEAT+++DT+ + IQ SL + ++ T I +AHR+++V+++D +L++ G I E Sbjct: 588 GRIEFENVHFSYADGRE-TLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIKDGCIVE 804
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: YFIC_BACSU (Uncharacterized ABC transporter ATP-binding protein yfiC OS=Bacillus subtilis GN=yfiC PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 62/221 (28.05%), Postives = 109/221 (49.32%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G I+ RD+ Y L+ + T P + VG TG+GK+T+ L R EP R + + QD +F+GT+R N+ + +D+++ A + + D+ +T+NG S GQ+QL+ + R +L +L+LDEAT+++DT T+ IQ++L + T + IAHR+ ++ +D +++L +G + E S Sbjct: 364 GSIEFRDVSFGYDKGQQ-TLKHLQFTVPAGQSIAFVGPTGAGKTTVTNLLARFYEPNDGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTANAHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHRLNTIQRADQIVVLKNGEMIEKGS 583
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_METFK (Lipid A export ATP-binding/permease protein msbA OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=msbA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 61/221 (27.60%), Postives = 112/221 (50.68%), Query Frame = 1 Query: 31 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 + G I ++ ++Y L ++ T +K +VGR+G GK+TL+ L R E R + S++ QD ++F TV +N+ L ++E + A D +++ L S++ + G S GQRQ + + R +LK IL+LDEAT+++DT ++ +Q +L + + T I IAHR++++ ++D ++++ G I E Sbjct: 340 AEGSIVFENVTLQYPSAQRPALLDLNFTVKPGEKIALVGRSGGGKTTLVNLLPRFYEVQQGRVLIDGVDVRNMSLKSLRQQFSLVSQDVILFNDTVFNNIAYGVLRNASEEDVIAAAKAAHAWDFIQQLPNGLQSEIGDRGVRLSGGQRQRLAIARAILKNAPILLLDEATSALDTESERHVQAALDELMQNRTSIVIAHRLSTIENADRIMVMEQGRIIE 560
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_EMENI (Iron-sulfur clusters transporter atm1, mitochondrial OS=Emericella nidulans GN=atm1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 62/223 (27.80%), Postives = 112/223 (50.22%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSD--CTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G+I ++ Y P P +L+ S T P +K IVG +G GKST+++ LFR + R + ++PQD +F T+ N+ + +DE++ +A + + + V + + V E G S G++Q + + R+LLK ++L DEAT+++DT T+ + Q++ + T + +AHR+ ++ D D +L+L G + E S Sbjct: 431 GQIRFENVTFGYHPERP-ILKNASFTIPAGQKFAIVGPSGCGKSTILRLLFRYYDVQEGRILVDGQDIRHVTIESLRKAIGVVPQDTPLFNDTIEHNIRYGRLDASDEEVRKAARRAHIHELVERLPEGYRTAVGERGMMISGGEKQRLAISRLLLKDPQLLFFDEATSALDTYTEQALMQNINSILKEKGRTSVFVAHRLRTIYDCDQILVLKDGQVAELGS 652
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB19B_ARATH (ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 59/221 (26.70%), Postives = 112/221 (50.68%), Query Frame = 1 Query: 34 HGKIDLRDLQVRYAPHMPFVL--RGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV-DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 HG I+ +D+ Y P P V+ R + FP K +VG +GSGKST++ + R +P + R ++ ++ Q+P +F T+ N+ + T ++ A + D++V E G S GQ+Q + + R +LK KIL+LDEAT+++D ++++++Q++L + T + +AHR+ ++ + D + ++ G + E Sbjct: 362 HGNIEFKDVTFSY-PSRPDVMIFRNFNIFFPSGKTVAVVGGSGSGKSTVVSLIERFYDPNSGQILLDGVEIKTLQLKFLREQIGLVNQEPALFATTILENILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQVGERGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDASSESIVQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVE 581 HSP 2 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 55/223 (24.66%), Postives = 105/223 (47.09%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMP--FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEE-YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G I+ R + Y P P V R + +VG +GSGKS++I + R +P A R ++ ++ Q+P +F T+ N+ ++ T+ ++ +A + + V E G S GQ+Q + + R +LK +L+LDEAT+++D ++ ++Q++L + T + +AHR++++ D + ++ G I E S Sbjct: 1008 GDIEFRHVDFAY-PSRPDVMVFRDFNLRIRAGHSQALVGASGSGKSSVIAMIERFYDPLAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAATIFDNIAYGKDGATESEVIDAARAANAHGFISGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKNPTVLLLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGS 1229
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_BURS3 (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia sp. (strain 383) GN=msbA PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 68/223 (30.49%), Postives = 112/223 (50.22%), Query Frame = 1 Query: 31 SHGKIDLRDLQVRY-APHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 S G I+ R++ Y A P + R PGE + G +GSGK+TL+ L R +P R++++++ QD V+F T+ +NV + ++ AL+ L D V LD+ V NG S GQRQ + + R + K IL+LDEAT+++D+ ++ +Q +L + T + IAHR++++ +D +L+L G I E S Sbjct: 348 SRGDIEFRNVTFDYGAAERPTLDRISFKVAPGEM-IALAGPSGSGKTTLVNLLPRFFDPTDGAILVDGVPVADYDLHALRSQMAMVSQDVVLFNDTIAANVAYGQTPDRARVQAALEAANLADAVAAMPDGLDTLVGGNGMRLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALERLMEGRTTLVIAHRLSTIERADRILVLEAGKIVEEGS 569
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB1B_ARATH (ABC transporter B family member 1 OS=Arabidopsis thaliana GN=ABCB1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 61/220 (27.73%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDE-QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G ++L+++ Y P P V L + P K +VG +GSGKST++ + R +P + R ++ ++ Q+P +F +++ N+ D+ +I EA + K D++V E G S GQ+Q + + R +LK IL+LDEAT+++D+ ++ L+Q++L + T + IAHR++++ +D+V +L G + E Sbjct: 366 GLVELKNVDFSY-PSRPDVKILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVLLDGQDLKTLKLRWLRQQIGLVSQEPALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSE 584 HSP 2 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 58/223 (26.01%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEY-TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G+++L+ + Y P P + R +S K +VG +G GKS++I + R EP++ R ++I+PQ+P +F T+ N+ E T+ +I +A + + V E G S GQ+Q + + R L+++ +I++LDEAT+++D ++ +Q++L Q S T I +AHR++++ ++ ++ ++ G + E S Sbjct: 1022 GEVELKHIDFSY-PSRPDIQIFRDLSLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSGRVMIDGKDIRKYNLKAIRKHIAIVPQEPCLFGTTIYENIAYGHECATEAEIIQAATLASAHKFISALPEGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEALDQACSGRTSIVVAHRLSTIRNAHVIAVIDDGKVAEQGS 1243
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: RTX3B_ACTPL (Toxin RTX-III translocation ATP-binding protein OS=Actinobacillus pleuropneumoniae GN=apxIIIB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21 Identity = 64/220 (29.09%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I + ++ RY P P +L ++ + + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ DP + E++ A D + + ++ V E G S GQRQ + + R L+ +IL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 470 GDIAFKHIRFRYKPDAPIILDDVNLSVKQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRDNIALTDP--SMSMERVIYAAKLAGAHDFISELREGYNTIVGELGAGLSGGQRQRIAIARALVNNPRILIFDEATSALDYESEHIIMQNMQKICHGRTVIIIAHRLSTVKNADRIIVMEKGHIVE 687 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |