FC931257

Overview
NameFC931257
Unique NameFC931257
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJE (Chaperone protein htpG OS=Campylobacter jejuni GN=htpG PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.209e-39
Identity = 80/184 (43.48%), Postives = 124/184 (67.39%), Query Frame = 3
Query:    6 EGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLRSSRRR 554
            EG+LE+ ++ F+P+ APFDLF    + + +KLYV+RVFI D+ +EL+P YL FV+GI+D EDLPLN+SRE LQ+N+ILK I++  VKK +   +++  N KE Y  F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP L   +++
Sbjct:  265 EGKLEYNSLFFIPQNAPFDLFRVDYQ-SGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREILQENQILKGIKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQK 446          

HSP 2 Score: 28.4906 bits (62), Expect = 8.209e-39
Identity = 19/42 (45.24%), Postives = 23/42 (54.76%), Query Frame = 2
Query:  560 EVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEK 685
            EVL M D ID      L EFEG K VS  +   K + S++EK
Sbjct:  449 EVLLMDDEIDSLVTPML-EFEGLKFVSINQVEDKNELSDEEK 489          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_BUCCC (Chaperone protein htpG OS=Buchnera aphidicola subsp. Cinara cedri GN=htpG PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.176e-39
Identity = 83/181 (45.86%), Postives = 120/181 (66.30%), Query Frame = 3
Query:    3 VEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFL 536
            VEG  E+  +L++PK+A +D++    K + +KLYV+ VFIMD   + +P YL FVKGI+DS+DLPLNISRE LQ + I  ++RK+L K+ + +   ++EN  + Y KF+  F   +K GI EDS NKT L+ LLR+ S K G  ++  SL +Y+  MK+ Q  IY+IT +S K+  NSP L
Sbjct:  270 VEGTQEYINLLYIPKKATWDIWHQENK-HGLKLYVKHVFIMDEATQFLPNYLRFVKGIIDSQDLPLNISREILQDSSITHILRKSLTKRILNILNNLSENNIKKYQKFWNVFGIIIKEGIAEDSENKTILSNLLRFSSIKKGNIEQTLSLNEYIKNMKKNQKKIYFITSDSYKSALNSPNL 449          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_VIBF1 (Chaperone protein htpG OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=htpG PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.198e-38
Identity = 83/203 (40.89%), Postives = 132/203 (65.02%), Query Frame = 3
Query:    3 VEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIA-ENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLRSSRRRAM-------KCSTWLM 581
            VEG+ ++ ++L++P +APFD+ + R   + +KLYV+RVFIMD+ E+ +P YL FVKG++DS DLPLN+SRE LQ NK+ + +R    K+ + + +++A ++ E Y  F++ F + LK G+ ED  NK K+A LLR+ +T+  S ++   L  YV RMKE Q+ I+Y+T +S  A +NSP L   + + +       +   WLM
Sbjct:  274 VEGKNDYTSLLYIPAKAPFDMMN-RDHKSGLKLYVQRVFIMDDAEQFMPTYLRFVKGLIDSNDLPLNVSREILQDNKVTQSLRSACTKRVLGMLEKMAKKDDEKYLTFWKQFGQVLKEGLAEDLANKEKIAGLLRFATTEKDSSEQALGLAGYVERMKEEQDKIFYLTADSYAAAKNSPHLEQFKAKGIEVVLMYDRIDEWLM 475          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.815e-38
Identity = 80/187 (42.78%), Postives = 121/187 (64.71%), Query Frame = 3
Query:    6 EGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENK-EDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLRSSRRRAMK 563
            EG+ E+ A+ FVP   PFD+FD  +K   +KLYV+RVFI D+ E L+P YL FV+G++D+ DLPLN+SRE +Q++ IL  IRK +  + I   +++A+ + E Y  F+++F   LK GI+ED   + +L  L R+H++ S +   SL +YV   KEGQ+ IYY+ G S   ++ SP L   R R ++
Sbjct:  270 EGRHEYTALAFVPGTQPFDMFDPERK-GRMKLYVKRVFITDDAE-LMPRYLRFVRGLIDTADLPLNVSREMIQESPILAAIRKGVTNRVITAIEKLADGESETYLTFWKNFGPVLKEGIYEDYERRAQLMALARFHTSASPEGHRSLAEYVKDAKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIE 454          

HSP 2 Score: 30.4166 bits (67), Expect = 1.815e-38
Identity = 14/32 (43.75%), Postives = 19/32 (59.38%), Query Frame = 2
Query:  554 GYEVLYMVDAIDEYAVGQLKEFEGKKLVSATK 649
            G EVL + D++D + V    EFEGK   S T+
Sbjct:  452 GIEVLLLTDSVDSFWVVNAPEFEGKAFKSITQ 483          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_ALKMQ (Chaperone protein htpG OS=Alkaliphilus metalliredigens (strain QYMF) GN=htpG PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.364e-38
Identity = 72/177 (40.68%), Postives = 117/177 (66.10%), Query Frame = 3
Query:    6 EGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSP 530
            +G + + AILF+P++ P+D + T++    ++LY   V IM+ C +L+P+Y  FVKG+VDSEDL LNISRE LQ ++ LK+I K + +K     + + +N +E Y +FY+SF + +K G++ D   NK  L +LL ++S+K   ++ +L +YV RMKE Q  IYY +G+S + ++  P
Sbjct:  274 DGAVRYNAILFIPEKIPYDFY-TKEYEKGLELYSSGVLIMNKCSDLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLKIIAKKIKEKIKSELELLLKNERERYEEFYDSFGRQIKYGVYSDFGQNKETLKDLLLFYSSKE-KKMVTLDEYVGRMKEDQKYIYYASGDSIEKIDKMP 448          

HSP 2 Score: 37.7354 bits (86), Expect = 2.364e-38
Identity = 14/45 (31.11%), Postives = 30/45 (66.67%), Query Frame = 2
Query:  554 GYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKK 688
            GYE+LY  D +DE+A+  L +++ K+  S +   L ++E +++++
Sbjct:  457 GYEILYFADDVDEFAIRVLVDYKEKEFKSVSSGDLGIEEKDEKEE 501          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJJ (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.365e-38
Identity = 79/184 (42.93%), Postives = 124/184 (67.39%), Query Frame = 3
Query:    6 EGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLRSSRRR 554
            EG+LE+ ++ F+P+ APFDLF    + + +KLYV+RVFI D+ +EL+P YL FV+GI+D EDLPLN+SRE LQ+N+ILK +++  VKK +   +++  N KE Y  F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP L   +++
Sbjct:  265 EGKLEYNSLFFIPQNAPFDLFRVDYQ-SGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREILQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQK 446          

HSP 2 Score: 27.335 bits (59), Expect = 2.365e-38
Identity = 18/42 (42.86%), Postives = 23/42 (54.76%), Query Frame = 2
Query:  560 EVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEK 685
            EVL M D ID      L EFEG K V+  +   K + S++EK
Sbjct:  449 EVLLMDDEIDSLVTPML-EFEGLKFVAINQVEDKNELSDEEK 489          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJD (Chaperone protein htpG OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.365e-38
Identity = 79/184 (42.93%), Postives = 124/184 (67.39%), Query Frame = 3
Query:    6 EGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLRSSRRR 554
            EG+LE+ ++ F+P+ APFDLF    + + +KLYV+RVFI D+ +EL+P YL FV+GI+D EDLPLN+SRE LQ+N+ILK +++  VKK +   +++  N KE Y  F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP L   +++
Sbjct:  265 EGKLEYNSLFFIPQNAPFDLFRVDYQ-SGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREILQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQK 446          

HSP 2 Score: 27.335 bits (59), Expect = 2.365e-38
Identity = 18/42 (42.86%), Postives = 23/42 (54.76%), Query Frame = 2
Query:  560 EVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEK 685
            EVL M D ID      L EFEG K V+  +   K + S++EK
Sbjct:  449 EVLLMDDEIDSLVTPML-EFEGLKFVAINQVEDKNELSDEEK 489          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJ8 (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.365e-38
Identity = 79/184 (42.93%), Postives = 124/184 (67.39%), Query Frame = 3
Query:    6 EGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLRSSRRR 554
            EG+LE+ ++ F+P+ APFDLF    + + +KLYV+RVFI D+ +EL+P YL FV+GI+D EDLPLN+SRE LQ+N+ILK +++  VKK +   +++  N KE Y  F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP L   +++
Sbjct:  265 EGKLEYNSLFFIPQNAPFDLFRVDYQ-SGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREILQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQK 446          

HSP 2 Score: 27.335 bits (59), Expect = 2.365e-38
Identity = 18/42 (42.86%), Postives = 23/42 (54.76%), Query Frame = 2
Query:  560 EVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEK 685
            EVL M D ID      L EFEG K V+  +   K + S++EK
Sbjct:  449 EVLLMDDEIDSLVTPML-EFEGLKFVAINQVEDKNELSDEEK 489          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_CLOAB (Chaperone protein htpG OS=Clostridium acetobutylicum GN=htpG PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.080e-38
Identity = 75/178 (42.13%), Postives = 113/178 (63.48%), Query Frame = 3
Query:    3 VEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKC-IELFQEIAENKEDYNKFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSP 530
            VEG + +  +LF+P  AP+D + T++    ++LY   V IM  C +L+P+Y  FV+G+VDS DL LNISRE LQ ++ LK I K + +K   EL      ++E+Y KF+ SF + LK G++ D  +NK  L +LL ++S+ +  +L +L +YV+RMKE Q  IYY  GES + +E  P
Sbjct:  273 VEGVVSYNTLLFIPASAPYDFY-TKEFEKGLELYSNGVMIMQKCGDLLPDYFSFVQGLVDSPDLSLNISRELLQHDRQLKFIAKKIKEKIKSELLSMAKNDRENYVKFFNSFGRQLKYGVYSDFGSNKEVLQDLLMFYSS-TEKKLVTLDEYVSRMKEDQKYIYYAAGESNEKIEKLP 448          

HSP 2 Score: 39.2762 bits (90), Expect = 3.080e-38
Identity = 16/45 (35.56%), Postives = 27/45 (60.00%), Query Frame = 2
Query:  554 GYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKK 688
            GYE+LY  D +DE+A+  L +++ K+  S + + L  +  E E K
Sbjct:  457 GYEILYFTDDVDEFAIKMLMKYKEKEFKSVSNKDLGFEADEKESK 501          
BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJR (Chaperone protein htpG OS=Campylobacter jejuni (strain RM1221) GN=htpG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 3.081e-38
Identity = 79/184 (42.93%), Postives = 124/184 (67.39%), Query Frame = 3
Query:    6 EGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAEN-KEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLRSSRRR 554
            EG+LE+ ++ F+P+ APFDLF    + + +KLYV+RVFI D+ +EL+P YL FV+GI+D EDLPLN+SRE LQ+N+ILK +++  VKK +   +++  N KE Y  F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP L   +++
Sbjct:  265 EGKLEYNSLFFIPQNAPFDLFRVDYQ-SGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREILQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQK 446          

HSP 2 Score: 26.9498 bits (58), Expect = 3.081e-38
Identity = 17/42 (40.48%), Postives = 23/42 (54.76%), Query Frame = 2
Query:  560 EVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEK 685
            EVL M D ID      L EFEG K ++  +   K + S++EK
Sbjct:  449 EVLLMDDEIDSLVTPML-EFEGLKFIAINQVEDKNELSDEEK 489          
The following BLAST results are available for this feature:
BLAST of FC931257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
HTPG_CAMJE8.209e-3943.48Chaperone protein htpG OS=Campylobacter jejuni GN=... [more]
HTPG_BUCCC9.176e-3945.86Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_VIBF11.198e-3840.89Chaperone protein htpG OS=Vibrio fischeri (strain ... [more]
HTPG_RHIEC1.815e-3842.78Chaperone protein htpG OS=Rhizobium etli (strain C... [more]
HTPG_ALKMQ2.364e-3840.68Chaperone protein htpG OS=Alkaliphilus metalliredi... [more]
HTPG_CAMJJ2.365e-3842.93Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJD2.365e-3842.93Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CAMJ82.365e-3842.93Chaperone protein htpG OS=Campylobacter jejuni sub... [more]
HTPG_CLOAB3.080e-3842.13Chaperone protein htpG OS=Clostridium acetobutylic... [more]
HTPG_CAMJR3.081e-3842.93Chaperone protein htpG OS=Campylobacter jejuni (st... [more]

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Properties
Property NameValue
Genbank descriptionC34103B12EF PostHarvP1 Citrus clementina cDNA clone C34103B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931257 ID=FC931257; Name=FC931257; organism=Citrus clementina; type=EST; length=688bp
CAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTTGTTCCCAAGAGG
GCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCAATAATATCAAGCT
CTACGTCCGCCGTGTCTTCATCATGGACAACTGTGAGGAGTTGATCCCCG
AATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCTCCCTCTT
AACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGGTCATCCG
CAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATTGCTGAGA
ACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAG
CTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCT
CCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATT
ATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGT
GAGAGCAAGAAGGCTGTTGAGAACTCCCCATTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAG
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