FC931257

Overview
NameFC931257
Unique NameFC931257
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931257 vs. ExPASy Swiss-Prot
Match: HTPG_BACFN (Chaperone protein htpG OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=htpG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11
Identity = 50/167 (29.94%), Postives = 88/167 (52.69%), Query Frame = 3 
Query:    3 VEGQLEFKAILFVPK-RAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIH------EDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQND 482
            V+       IL+ PK ++  DL       N I+LY  +V++ D+ E ++P++L  + G++DS D+PLN+SR  LQ +  +K I   + KK  +  Q I +N  D  +F E ++ +LK+ I+      ED  +K +   L     T +  +  + ++Y T +K+ Q D
Sbjct:  261 VDYPFHLTGILYFPKVKSNIDL-----NKNKIQLYCNQVYVTDSVEGIVPDFLTLLHGVLDSPDIPLNVSRSYLQSDSNVKKISTYISKKVSDRLQSIFKN--DRAQFEEKWN-DLKIFINYGMLTQEDFYDKAQKFALF----TDTDGKHYTFEEYQTLIKDNQTD 415
The following BLAST results are available for this feature:
BLAST of FC931257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
HTPG_BACFN6.198e-1129.94Chaperone protein htpG OS=Bacteroides fragilis (st... [more]

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Properties
Property NameValue
Genbank descriptionC34103B12EF PostHarvP1 Citrus clementina cDNA clone C34103B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931257 ID=FC931257; Name=FC931257; organism=Citrus clementina; type=EST; length=688bp
CAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTTGTTCCCAAGAGG
GCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCAATAATATCAAGCT
CTACGTCCGCCGTGTCTTCATCATGGACAACTGTGAGGAGTTGATCCCCG
AATACCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCTCCCTCTT
AACATCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGGTCATCCG
CAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATTGCTGAGA
ACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAG
CTTGGTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCT
CCGATACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGATT
ATGTGACCAGAATGAAGGAAGGCCAGAATGATATCTACTACATCACTGGT
GAGAGCAAGAAGGCTGTTGAGAACTCCCCATTCTTGAGAAGCTCAAGAAG
AAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTACGCTGT
TGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAG
AAGGTCTCAAGCTTGACGAGAGTGAAGATGAGAAGAAG
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