FC931260

Overview
NameFC931260
Unique NameFC931260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  243 PKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PE-GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGWHRYTPMLQVIEAILKIQ 680
            P IAL NP + +  +L     +S +  LFRF+   S + LGL V   I   A +      + K  +R YTP S  +  GHFDLL+KVY        P+ G+M+Q+  SL  G  V+VKGP+  + Y           P     + M+AG    TP+ QVI+A+L+ Q
Sbjct:  622 PVIALSNPREKVPCQLVARTVLSRDVRLFRFALPSSGQVLGLPVGKHIFVCASI------DGKLCMRAYTPTSSVDEVGHFDLLVKVYFRNENTKFPDGGRMTQYLDSLPVGAHVDVKGPLGHVEYVGRGGFVIDGKPRKAGRLAMVAGGSGITPIYQVIQAVLRDQ 782          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA1_MAIZE (Nitrate reductase [NADH] (Fragment) OS=Zea mays PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 60/178 (33.71%), Postives = 84/178 (47.19%), Query Frame = 3
Query:  207 LVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS-------PNMKKH---IGMIAGWHRYTPMLQVIEAILKIQ 680
            L HL  I          NP + I  +L     +S +  LFRFS   P   LGL +   I   A +    EG  K  +R YTP S  +  GHFDLL+KVY +         G M+Q+  SL  G  ++VKGP+  + Y+          ++H   + MI G    TPM Q+I+A+L+ Q
Sbjct:  342 LSHLAPIRRAVRAPALSNPREKIHCRLVGKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCASI----EG--KLCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLDSLPVGSYIDVKGPLGHVEYTGRGSFVINGKQRHASRLAMICGGSGITPMYQIIQAVLRDQ 513          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R5_MOUSE (NADH-cytochrome b5 reductase-like OS=Mus musculus GN=Cyb5rl PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 44/151 (29.14%), Postives = 78/151 (51.66%), Query Frame = 3
Query:  255 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAV 707
            L+P+ ++ F +    +V+ +++L RF+   +++LGL     ++ R  +      +   + R YTPIS   A+G+FD+LIK Y  G MSQ+  S + GD    +GP     Y P     + M+A      PM+ ++++I   +   + VT V
Sbjct:   73 LSPETFLAFHISTMEKVTKDTYLVRFTLPGNSRLGLRPGQHLILRGVV------DGLEIQRAYTPISPVTAEGYFDVLIKCYRTGLMSQYVESWRTGDTAFWRGPFGSFLYEPKKYGELLMLAAGTGLAPMVPILQSITDDEDDETFVTLV 217          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 60/178 (33.71%), Postives = 84/178 (47.19%), Query Frame = 3
Query:  204 NLVHLDQINEETGPK-IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            N  HL  I E    + +AL P   I  KL     +SH+  LFR +     + LGL V   +   A +      + K  +R YTP S  +  G+ DL++K+Y +         G MSQH  SL  G V+ VKGP+  + Y+          P   K + M+AG    TP+ QVI+AILK
Sbjct:  621 NTSHLAPIKEIAPLRNVALIPGAKIPTKLVYKKSLSHDVRLFRLALPSDDQVLGLPVGKHVFLCATI------DDKLCMRAYTPTSTIDEVGYLDLVVKIYFKNSNPRFPNGGLMSQHLDSLPIGSVLHVKGPLGHVEYTGRGNFLVHGEPKFAKRLAMVAGGTGITPIYQVIQAILK 792          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA1_BRANA (Nitrate reductase [NADH], clone PBNBR1405 OS=Brassica napus GN=NIA1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 54/159 (33.96%), Postives = 78/159 (49.06%), Query Frame = 3
Query:  255 LNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGWHRYTPMLQVIEAIL 671
            +NP + +  KL +   +SH+   FRF+      +LGL V   I   A +      N K  +R YTP S  +A G+ DL+IKVY +         G MSQH  SL  G V+++KGP+  + Y           P     + M+AG    TP+ QVI++IL
Sbjct:  651 VNPREKVPVKLIEKTSISHDVRRFRFALPSEDQQLGLPVGKHIFLCATI------NDKLCLRAYTPTSTVDAVGYIDLVIKVYFKNVHPRFPNGGLMSQHPDSLPIGAVLDIKGPLGHIEYQGRGKFMVSGKPKFANKLAMLAGGTGITPIYQVIQSIL 803          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA_BEABA (Nitrate reductase [NADPH] OS=Beauveria bassiana GN=NIA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 53/160 (33.12%), Postives = 81/160 (50.62%), Query Frame = 3
Query:  249 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRA--PLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY------PEGKMSQHFASLKPGDVVEVKGPIEKLRY-----------SPNMKKHIGMIAGWHRYTPMLQVIEAI 668
            + L P  W    L+    VS +S +F F  D +A+ +GL     +L R   P  ++A      V+R YTP+S+T AKG  D+LIK+Y      P GKM+Q   S+  G  V++KGP+ K  Y           S ++++ + MI      TP+ QV+ A+
Sbjct:  633 VFLQPKYWSKAILETKTDVSSDSKIFSFRLDHAAQSIGLPTGQHLLVRLRDPATREA------VIRAYTPLSETHAKGQLDILIKIYRDVPGQPGGKMTQALDSIPLGHFVDIKGPVGKFEYLGKGHCTVSGTSRHVRRFV-MICAGSGVTPIFQVLRAV 785          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R2_DANRE (NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=cyb5r2 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 55/168 (32.74%), Postives = 82/168 (48.81%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGWHRYTPMLQVIEAI 668
            PK   +P       L +   ++H++  FRF    S+  LGL +   I   A +      N   VVR YTP+S  + +G+ DL++KVY +         GKMSQ+  ++K GD ++ +GP   L Y+        P+ K        KH+ MIAG    TPMLQ+I +I
Sbjct:   41 PKALQDPSVKYPLPLIEKEEINHDTKRFRFGLPSSSHVLGLPIGQHIYLSAKV------NGSLVVRAYTPVSSDQDQGYVDLVVKVYYKNTHPSYPDGGKMSQYLDNMKIGDTIDFRGPNGLLVYNGKGKFAIRPDKKSEAEVRKFKHVAMIAGGTGITPMLQLIRSI 202          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R2_HUMAN (NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=CYB5R2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 53/165 (32.12%), Postives = 80/165 (48.48%), Query Frame = 3
Query:  258 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKV--------YPE-GKMSQHFASLKPGDVVEVKGPIEKLRY----------------SPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            +P+      L +  ++SHN+  FRF    P   LGL V + +   A +      + + VVR YTP+S  + +G  DL+IK+        YPE GKM+Q+  ++K G+ +  +GP  +L Y                   +  H+GMIAG    TPMLQ+I  I K
Sbjct:   13 DPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKI------DNELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITK 171          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 63/184 (34.24%), Postives = 92/184 (50.00%), Query Frame = 3
Query:  204 NLVHLDQINEET---GPKIALN-PDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY-----PE----GKMSQHFASLKPG-DVVEVKGPIEKLRYS----------PNMKKHIGMIAGWHRYTPMLQVIEAILKIQ 680
            +L HL  I E T   G  IAL+ P + +  +L D   +SH+  LFRF+   S + LGL V   I   A +      + K  +R YTP S  +  G F+LL+KVY     P+    G M+Q+  SL+ G   ++VKGP+  + Y+              + + MI G    TPM QVI+A+L+ Q
Sbjct:  630 SLSHLAPIREATKVAGAPIALSSPREKVPCRLVDKKELSHDVRLFRFALPSSDQVLGLPVGKHIFVCATI------DGKLCMRAYTPTSMVDEIGQFELLVKVYFRDEHPKFPNGGLMTQYLESLQVGSSYIDVKGPLGHVEYTGRGNFVINGKQRRARRLAMICGGSGITPMYQVIQAVLRDQ 807          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 48/157 (30.57%), Postives = 73/157 (46.50%), Query Frame = 3
Query:  255 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY------PEGKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            L P  W    L     VS ++H+F  S + PS  LGL     ++ + P  + +   +  ++R YTPIS ++  G  D+LIK+Y      P GKM+    +L  G V+E KGP  +  Y               K   MI G    TP+ QV+ A+++
Sbjct:  613 LTPKAWTKATLTKKTSVSSDTHIFTLSLEHPSQALGLPTGQHLMLKTPDPKSSSSGS--IIRSYTPISPSDQLGMVDILIKIYAETPSIPGGKMTTALDTLPLGSVIECKGPTGRFEYLDRGRVLISGKERFVKSFVMICGGTGITPVFQVLRAVMQ 767          
The following BLAST results are available for this feature:
BLAST of FC931260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
NIA3_MAIZE1.467e-1335.33Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA1_MAIZE1.916e-1333.71Nitrate reductase [NADH] (Fragment) OS=Zea mays PE... [more]
NB5R5_MOUSE1.916e-1329.14NADH-cytochrome b5 reductase-like OS=Mus musculus ... [more]
NIA_BETVE2.503e-1333.71Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA1_BRANA2.503e-1333.96Nitrate reductase [NADH], clone PBNBR1405 OS=Brass... [more]
NIA_BEABA3.269e-1333.13Nitrate reductase [NADPH] OS=Beauveria bassiana GN... [more]
NB5R2_DANRE3.269e-1332.74NADH-cytochrome b5 reductase 2 OS=Danio rerio GN=c... [more]
NB5R2_HUMAN4.269e-1332.12NADH-cytochrome b5 reductase 2 OS=Homo sapiens GN=... [more]
NIA1_HORVU9.511e-1334.24Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
NIA_EMENI1.622e-1230.57Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]

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Properties
Property NameValue
Genbank descriptionC34103C03EF PostHarvP1 Citrus clementina cDNA clone C34103C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931260 ID=FC931260; Name=FC931260; organism=Citrus clementina; type=EST; length=727bp
GACTTTTCTTTGCTTTGCTTCTTCTCCAACATTAGAAAATGGCTACGACC
TTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCATT
TGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGAG
CAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATCC
CCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAAT
TGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCAA
GGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGCC
AAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAGG
ACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCTA
TATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTAT
CCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATGT
AGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATGA
AGAAACACATCGGCATGATAGCTGGGTGGCACAGGTATACTCCTATGCTT
CAGGTAATTGAGGCTATACTGAAGATCCAGATGACACACTCAGGTGTCAC
TGCTGTATGGCATATATCCCAGATGAT
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