FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUO2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.720e-82 Identity = 151/223 (67.71%), Postives = 178/223 (79.82%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TV DARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVVDARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHOP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=dxs PE=3 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 2.246e-82 Identity = 149/224 (66.52%), Postives = 180/224 (80.36%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA+EG KPFCAIYS+FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD ++ CLPN V+MA SDEAEL+HMVAT I+DRPS R+PRG G G +P + G PLEIGKGR++ +G++VA+L +G+ + +C AA L + +S TVADARF KPLD DL+ +LANEHEILIT+EEGS+GGFGSHV L+ G LDG Sbjct: 364 DVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--DVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELATLGLSTTVADARFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDG 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus GN=dxs PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.934e-82 Identity = 151/223 (67.71%), Postives = 178/223 (79.82%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain S19) GN=dxs PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.934e-82 Identity = 151/223 (67.71%), Postives = 178/223 (79.82%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_OCHA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 5.004e-82 Identity = 151/223 (67.71%), Postives = 178/223 (79.82%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA+ L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BRUA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain 2308) GN=dxs PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 8.536e-82 Identity = 150/223 (67.26%), Postives = 177/223 (79.37%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+L EHE+L+ VEEG+VGGF SHV FL G+LD Sbjct: 365 DVGIAEQHAVTFAAGLASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLVREHEVLVMVEEGAVGGFSSHVLQFLATDGLLD 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.115e-81 Identity = 147/226 (65.04%), Postives = 181/226 (80.09%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GP 675 DVGIAEQHAVTFAAGLA++G KPFCA+YS+FLQRGYDQ+VHDV +Q LPVRF +DRAG VGADGPTH G+FD TF++ LP MVVMA +DEAEL HMV TAA D+ P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + +C+ AA L + +S TVADARF KPLD DLIRQLA HE+L+T+EEGSVGGFG+HV HF+ +G+LD GP Sbjct: 366 DVGIAEQHAVTFAAGLAADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGP 589
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHOPB (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=dxs PE=3 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 2.484e-81 Identity = 147/224 (65.62%), Postives = 179/224 (79.91%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA+EG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD F+ CLPNMV+MA SDEAEL+HMVAT I+DRPS R+PRG G G +P G LEIGKGRI+ EG+++A+L +G+ + +C AA+ L + +S T+ADARF KPLD +L+ +LA +HEIL+T+EEGS+GGFGSHV L G+LDG Sbjct: 367 DVGIAEQHAVTFAAGLAAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGIALEIGKGRIVREGNKIALLSFGTRLAECEKAADELATLGLSTTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDG 588
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 4.236e-81 Identity = 146/223 (65.47%), Postives = 176/223 (78.92%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG KPF AIYS+FLQR YDQVVHDV +QKLPVRF +DRAG VGADG THCGAFD TF++ LP VVMA +DEAEL HMV TAA DD P FR+PRGNG+G +P +G LE+GKGR++ EG +VA+L +G+ +Q C++AA L + +S TVADARF KPLD DLIR+LA HE+L+TVEEG++GGF SHV FL G+L+ Sbjct: 366 DVGIAEQHAVTFAAGLATEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAAAYDDGPIAFRYPRGNGVGVDMP--ERGEVLELGKGRVVREGSKVALLSFGTRLQDCLIAAEELGAAGLSTTVADARFAKPLDEDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLE 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_NITWN (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 5.533e-81 Identity = 146/224 (65.18%), Postives = 177/224 (79.02%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA+EG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD F+ CLPNMV+MA +DEAEL+HMVAT I+DRPS R+PRG G G +P G PL IGKGRI+ +G ++A+L +G+ + +C AA+ L + +S T+ADARF KPLD DL +LA EH++LIT+EEGS+GGFGSHV L +G LDG Sbjct: 391 DVGIAEQHAVTFAAGLATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAAADEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLALKLAREHDVLITIEEGSIGGFGSHVMQTLMDNGALDG 612 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |