FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 1.968e-78 Identity = 141/223 (63.23%), Postives = 179/223 (80.27%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTF+A LA+ G++PFCAIYS+FLQRGYDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH G+FD+ F+S LP +VVMA +DEAEL+HMVATAA D+ P FR+PRG+G+G +P KG PL+IG+GR++ EG R+A+L +G+ + + +AA L ++ IS TVADARF KPLD DLI QLA HE LIT+EEG++GGFGSHV L +G+ D Sbjct: 366 DVGIAEQHAVTFSAALAAGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMPV--KGVPLQIGRGRVVSEGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.570e-78 Identity = 142/223 (63.68%), Postives = 176/223 (78.92%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAG+A EG KPF AIYS+FLQR YDQV+HDV +QKLPVRFA+DRAG VGADG TH G+FDI F++ LP VVMAPSDE ELMHMV TAA D P FR+PRG G+G LP +G LEIGKGR+L EG RVA++ +G+ + + ++AA+ L ++ +S TVADARF KPLD DL+R+LA EHE+L+ VEEG++GGFG+H+ FL G+L+ Sbjct: 366 DVGIAEQHAVTFAAGMACEGYKPFVAIYSTFLQRAYDQVIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALIAEGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLE 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_AGRVS (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dxs PE=3 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 2.570e-78 Identity = 144/223 (64.57%), Postives = 172/223 (77.13%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG KPFCA+YS+FLQRGYDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD F++ LP VVMA +DEAEL HMV TAA D+ P FR+PRG G+G +P +G L IGKGRI+ EG +VA+L +G+ + +C++AA L + + TVADARF KPLD DLIRQLA H +LITVEEG+VGGFGS V H L G+LD Sbjct: 366 DVGIAEQHAVTFAAGLAAEGYKPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTGFLASLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVQMP--ERGEILPIGKGRIIKEGSKVALLSFGTRLAECLVAAEDLDAAGLPTTVADARFAKPLDLDLIRQLARHHAVLITVEEGAVGGFGSQVLHMLANEGLLD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS1_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain CCS1) GN=dxs1 PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 5.726e-78 Identity = 145/223 (65.02%), Postives = 177/223 (79.37%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQH VTFAAG+A+ G+KPF AIYS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G++DI++++ LP VVMA +DEAEL HMV TA IDDRPS FRFPRG G+G +P ++GT LEIGKGR++ EG+RVAIL +G+ +++ AA L + I+ T+ADARF KPLD LI QLA HE LITVEEG+VGGFGSHV H L + + D Sbjct: 368 DVGIAEQHGVTFAAGMAAGGLKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGCTHAGSYDISYLANLPGFVVMAAADEAELRHMVRTALEIDDRPSAFRFPRGEGMGVDMP--DRGTALEIGKGRMISEGNRVAILNFGTRLKEVQEAAETLSQRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENAVFD 588
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CAUCR (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus GN=dxs PE=3 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.276e-77 Identity = 146/223 (65.47%), Postives = 175/223 (78.48%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAG+A++G+KPF AIYS+FLQRGYDQVVHDV +Q LPVRFAMDRAGLVGADGPTH G+FDI FM LP MV+MA +DE EL MVATAA IDDRPS FR+PRG G+G +P PLEIGKGRI+ EG VAI+ +G+ + + + AA++L ++ +S TV DARF KPLD DL+ +LA EHE +ITVEEGS+GGFG+ V L G LD Sbjct: 364 DVGIAEQHAVTFAAGMAADGMKPFAAIYSTFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIGFMGALPGMVLMAAADEVELARMVATAAEIDDRPSAFRYPRGEGLGLDMPA--IAEPLEIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALD 584
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CAUCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dxs PE=3 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.276e-77 Identity = 146/223 (65.47%), Postives = 175/223 (78.48%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAG+A++G+KPF AIYS+FLQRGYDQVVHDV +Q LPVRFAMDRAGLVGADGPTH G+FDI FM LP MV+MA +DE EL MVATAA IDDRPS FR+PRG G+G +P PLEIGKGRI+ EG VAI+ +G+ + + + AA++L ++ +S TV DARF KPLD DL+ +LA EHE +ITVEEGS+GGFG+ V L G LD Sbjct: 364 DVGIAEQHAVTFAAGMAADGMKPFAAIYSTFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIGFMGALPGMVLMAAADEVELARMVATAAEIDDRPSAFRYPRGEGLGLDMPA--IAEPLEIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALD 584
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHIE6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=dxs PE=3 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 4.847e-77 Identity = 144/223 (64.57%), Postives = 172/223 (77.13%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG KPF A+YS+FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD F++ LP VVMA +DEAEL HMV TA D P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + C+LAA L++ +S TVADARF KPLD DLIRQLA HE+LITVEEGSVGGFGS V +L+ G+LD Sbjct: 366 DVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAAGLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 1.842e-76 Identity = 142/223 (63.68%), Postives = 173/223 (77.58%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG KPF A+YS+FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD F++ LP VVMA +DEAEL HMV TAA D P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + C+LA+ L++ +S TVADARF KPLD +L+RQLA HE+LITVEEGSVGGFGS V +L+ G+LD Sbjct: 366 DVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAAAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLASEDLEAAGLSTTVADARFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_AGRRK (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=dxs PE=3 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 5.359e-76 Identity = 143/223 (64.13%), Postives = 170/223 (76.23%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG KPF A+YS+FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD TF++ LP VVMA +DEAEL HMV TAA D P FR+PRG G+G +P +G LEIGKGRI+ +G +VA+L +G+ + + AA L + + TVADARF KPLD DLIRQLA+ HE+LIT+EEGSVGGFGS V FL G+LD Sbjct: 366 DVGIAEQHAVTFAAGLAAEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYDLGPISFRYPRGEGVGIEMP--ERGQILEIGKGRIVKQGSKVALLSFGTRLADSLAAAEDLDAAGLPTTVADARFAKPLDHDLIRQLASHHEVLITIEEGSVGGFGSQVMQFLASEGLLD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SILPO (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter pomeroyi GN=dxs PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 6.999e-76 Identity = 140/223 (62.78%), Postives = 174/223 (78.03%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQH VTF+A LA+ G+KPFCA+YS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FDI +++ LP MVVMA +DEAEL+HMVATAA DD P FR+PRG G+G +P G LEIGKGR++ +G RVA+L +G+ + + AA L ++ I+ T+ADARF KPLD DLI LA++HE LIT+EEG+VGGFGSHV L G+ D Sbjct: 370 DVGIAEQHGVTFSAALAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELVHMVATAAAHDDGPIAFRYPRGEGVGVEMP--ELGKVLEIGKGRMIQKGARVALLSFGTRLTEVQKAAEALAARGITPTIADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQLLADEGVFD 590 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |