FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_AZOPC (1-deoxy-D-xylulose-5-phosphate synthase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=dxs PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.473e-41 Identity = 85/221 (38.46%), Postives = 132/221 (59.73%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSG 660 DVGIAE HA+TFAAGLA EG+ PFC +YSSF+QR YD ++HD LQ L + +DRAGLVG DG TH G D+ ++ C+PN+ + AP +E +L +++ T A+ + F G G + L +GKGR L EG +A++ G++ A +++ ISV D + KP+D +L+ ++ + ++ +E+G++ GG G+ V F+ +G Sbjct: 371 DVGIAEGHAITFAAGLAKEGMIPFCNVYSSFMQRAYDNIIHDAVLQNLNMILCLDRAGLVGEDGVTHHGVLDLAYLRCIPNITITAPLNEKDLRNLMFT-AIQPNAKGVFVIRYPKGYGELKNWEYSFEALPVGKGRKLKEGKEIAVVSIGTIGNLARKAIRLVEKLGISVAHYDMIYLKPIDEELLHEIGKNYRCVVVIEDGTIKGGLGTAVIEFMVQNG 590
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_PSYCK (1-deoxy-D-xylulose-5-phosphate synthase OS=Psychrobacter cryohalolentis (strain K5) GN=dxs PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41 Identity = 101/227 (44.49%), Postives = 137/227 (60.35%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGA-VLPPNNKGTPLEIGKGRILMEGD---RVAILGYGSVVQQCVLAANM-----LKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSV-GGFGSHVCHFL 648 DV IAEQHAVT A G+A++GVKP AIYS+FLQRGYDQ++HDV LQ L V FA+DRAGLVG DG TH G FD F+ C+PNM++ AP DE E H++ T + R+PRG G GA ++ P E +L D ++A+L +G++V+ AA M L + + V + R+ KPLDT+L+ L + + T+EE + GG GS V +L Sbjct: 403 DVAIAEQHAVTLAGGMATQGVKPIVAIYSTFLQRGYDQLIHDVALQNLDVMFAIDRAGLVGEDGATHAGVFDFAFLRCVPNMLIAAPKDENECYHLLNTCYEYQG-CTAVRYPRGVGTGATIIQPAQIYNIGEAVIESVLGTDDAPKKLALLAFGTMVETAQKAAEMIAKSPLLASSCQLHVVNMRWVKPLDTNLLETLVEQGVTHIATLEEHMIMGGAGSAVNEYL 628
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_THET2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dxs PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.286e-41 Identity = 98/221 (44.34%), Postives = 130/221 (58.82%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGI 663 DVGI E AVT AAGLA G+KP AIYS+FLQR YDQV+HDV ++ LPV FA+DRAG+VGADG TH G FDI ++ +PN+ + AP D EL M+ A + P R+PR N A P + GK +L EG IL +G ++ + AA D V V +ARF KPLD +++R L + +++L + +GGFGS V L G+ Sbjct: 355 DVGICEDVAVTTAAGLALRGMKPIVAIYSTFLQRAYDQVIHDVAIENLPVVFAIDRAGIVGADGATHHGVFDIAYLRTVPNLQIAAPKDALELRAMLKKALEVGG-PVAIRYPRDNVERA---PEGVWPEIAWGKWEVLKEGTEAYILAFGKTLKYALEAA----GDDPRVGVVNARFLKPLDREMLRAL-SRYKLLTVEDHQRMGGFGSAVLEALNEMGL 566
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_DEIGD (1-deoxy-D-xylulose-5-phosphate synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=dxs PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41 Identity = 99/222 (44.59%), Postives = 133/222 (59.91%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGI 663 DVGIAE AVT AAG+A +G++P AIYS+FLQR YDQV+HDV ++ L V FA+DR G+VGADG TH G FD++++ +PN+ + P D AEL M+ A P R+PRGN P L G L +GD V IL G ++ + AA L V V +ARF KPLD ++R++A + L+TVE+ + VGGFGS V L+ G+ Sbjct: 372 DVGIAEDVAVTTAAGMALQGMRPIVAIYSTFLQRAYDQVLHDVAIENLNVTFAIDRGGIVGADGATHNGVFDLSYLRSIPNVGIGLPKDAAELRGMLKYAQE-HAGPFAIRYPRGN---VERVPEGTWPELRWGTWERLQDGDDVVILAGGKALEYALKAARDLP----GVGVVNARFVKPLDQGMLREVATKARALVTVEDNTVVGGFGSAVLEALSALGL 585
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_THEMA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga maritima GN=dxs PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.310e-41 Identity = 92/221 (41.63%), Postives = 133/221 (60.18%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSG 660 D+GI EQ VTF A L G+KP AIYS+FLQR YDQ++HDV LQ PV FA+DR+G+VG DGPTH G FDI ++ +PNM +++PS E ++ + T D P R+P+ + G V +++G +IL G AI+ G+++ N + + VTV +A KPLDT +++++A +H+++ITVEE +GGFGS V L G Sbjct: 345 DLGITEQTCVTFGAALGLHGMKPVVAIYSTFLQRAYDQIIHDVALQNAPVLFAIDRSGVVGEDGPTHHGLFDINYLLPVPNMKIISPSSPEEFVNSLYTVLKHLDGPVAIRYPKESFYGEVESLLENMKEIDLG-WKILKRGREAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTAVLKEIARDHDLIITVEEAMKIGGFGSFVAQRLQEMG 557
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_HELPG (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori (strain G27) GN=dxs PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.310e-41 Identity = 87/224 (38.84%), Postives = 131/224 (58.48%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGI--GAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGIL 666 DV IAEQHA+T ++ +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ + V P+ +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S + FL+ IL Sbjct: 355 DVAIAEQHALTSSSAMAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRGSFVLKEGVFEPSG----FVLGQSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIVAPYQKLYVFSDNYKLGGVASAILEFLSEQNIL 574
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CAMJD (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dxs PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.310e-41 Identity = 94/218 (43.12%), Postives = 131/218 (60.09%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSVGGFGSHVCHFL 648 DV IAEQHAVT A +A EG KPF AIYS+FLQR YDQV+HD + L V FAMDRAG+VG DG TH G FD++F++ LPN ++AP DE ++MH + A + P FR+PRG+ +L ++ GK + L++ +A LGYG V + L+ + + + D F KPLD +L+ +LA + +I I E +GG S + +FL Sbjct: 355 DVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDE-QMMHNIMEYAYLHQGPIAFRYPRGS---FILDEEFNPCEIKFGKAQWLVKNSSEIAFLGYGQGVAKAWQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINNFL 568
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_HELPH (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori (strain HPAG1) GN=dxs PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.247e-40 Identity = 87/224 (38.84%), Postives = 130/224 (58.04%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGI--GAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGIL 666 DV IAEQHA+T ++ +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ V P+ +G+ +L + + ++GYG+ V + L LK ++I + D RF KPLD +L +A ++ + + +GG S + FL+ IL Sbjct: 355 DVAIAEQHALTSSSAMAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRGSFALKEGVFEPSG----FVLGRSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIIAPYQKLYVFSDNYKLGGVASAILEFLSEQNIL 574
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_HELHP (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter hepaticus GN=dxs PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.247e-40 Identity = 91/226 (40.27%), Postives = 128/226 (56.64%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGI--GAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGSHVCHFLTLSGILD 669 DV I E HAVT A +A EG KPF AIYS+FLQR YDQ++HDV + LPVRF +DRAG+VG DG TH G FDI ++ +P+MV+ AP D A L VA A +D P FR+PRG+ V N +G+ +L G ++ ++GYG+ V + L ++ ++ D RF KPLD ++ ++ H I + + +GG S + F+ I D Sbjct: 368 DVAICEAHAVTSMAAIAKEGFKPFVAIYSTFLQRAYDQIIHDVGILGLPVRFCIDRAGIVGEDGETHQGLFDIAYLRSIPHMVLFAPRDNASLQQAVAFAYRYNDSPCAFRYPRGSFTLEEGVFVSNE----FVLGQAEMLKRGKKILLVGYGNGVGRAYKVYQALITEGYEPSLLDLRFVKPLDKHMLNEVFKTHTHICVFSDSYYMGGVASALLEFMAEENIKD 589
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_ARCB4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Arcobacter butzleri (strain RM4018) GN=dxs PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.247e-40 Identity = 99/218 (45.41%), Postives = 131/218 (60.09%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEG-DRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEH-EILITVEEGSVGGFGSHVCHFL 648 DV IAEQHA+T A +A EG KPF IYS+FLQRG+DQ++HDV L LPV FAMDRAG+VG DG TH GAFDI+F+ +PNMV+ AP D L + A +++ P R+PR GA N TP +GK IL G +GYG+ V + + L ++DI TV D RF KPLD +L+ +L+ ++ + I + G GS + FL Sbjct: 348 DVAIAEQHAITSMAAMAKEGFKPFITIYSTFLQRGFDQIIHDVCLMNLPVVFAMDRAGIVGNDGETHQGAFDISFLRFIPNMVLFAPRDNETLEQSLEFAYNLNN-PCAIRYPR----GAFKKLNFVPTPFVLGKAEILKTGISNKLFIGYGAGVSRAI-DTEALHNEDI--TVVDLRFVKPLDKNLLLELSKKYNDWYIFSDSQKQSGVGSAILEFL 557 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |