FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHOE4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=dxs PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.476e-33 Identity = 83/222 (37.39%), Postives = 127/222 (57.21%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 DVGIAEQHA+T AAGLA G+ P AIYS+FL R +DQ++ DV L K PV +DRAG+ G DG +H G +D++ + +P + V AP D L + A ++DD P+ RFP+G A+ +++ K GD V ++ G + A L Q ISV V D R+ P+ L++ +A+++ +++T+E+G + GG GS V + +G+ Sbjct: 362 DVGIAEQHAMTSAAGLALGGLHPVVAIYSTFLNRAFDQLLMDVALLKQPVTVVLDRAGVTGVDGASHNGVWDLSLLGIIPGIRVAAPRDADTLREELDEALLVDDGPTVVRFPKGAVPEAIPAVKRLDGMVDVLKASEGERGD-VLLVAVGPFASLALEIAERLDKQGISVAVVDPRWVLPVADSLVK-MADKYALVVTIEDGGLHGGIGSTVSAAMRAAGV 581
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CORJK (1-deoxy-D-xylulose-5-phosphate synthase OS=Corynebacterium jeikeium (strain K411) GN=dxs PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.928e-33 Identity = 88/225 (39.11%), Postives = 131/225 (58.22%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGN---GIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 DVGIAEQHAVT AAGLA G+ P A+YS+FL R +DQ++ DV L KL V +DRAG+ G+DG +H G +D++ +P + V AP D L + A +DD P+ RFP+G+ GI AV ++ E + EG RV I+ +G++ +Q + AA L + S TV D + P D + + A ++++T+E+ V GG GS + + L+ +GI Sbjct: 366 DVGIAEQHAVTSAAGLALGGLHPVVAVYSTFLNRAFDQLLMDVALLKLGVTLVLDRAGITGSDGASHNGMWDLSITGIVPGIHVAAPRDARTLELALDRAVAVDDAPTVVRFPKGDAPAGIPAVREEDDYDVLFEQSGDK--SEG-RVLIVSFGALSKQALGAAQALCDANFSATVVDPHWVVP-TADSLLEFARGFDLIVTIEDNGVHGGAGSRLHYDLSQAGI 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CHLFF (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydophila felis (strain Fe/C-56) GN=dxs PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.289e-33 Identity = 85/221 (38.46%), Postives = 118/221 (53.39%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSG 660 DVGIAE HAVTF+AG+A C+IYS+FL R D V HDV LQ LPV A+DRAGL DG +H G +DI+F+ +PNM++ P A ++ + +++ + PS R+P I + + G G IL +G+ + I+G G + + L + IS TV D F KP D +L L H +I +EE S+ GG S FL G Sbjct: 368 DVGIAEGHAVTFSAGIAKAKSPVICSIYSTFLHRALDNVFHDVCLQGLPVILAIDRAGLAYGDGCSHHGIYDISFLRAMPNMIICQPR-SAIVLQQLLQSSLQWNMPSAIRYPNIAAIQRDPIATDVNMHRDPGLGEILSQGEDILIIGLGHMCNTALSIKLQLLTHGISATVVDPVFIKPFDNNLFSILLMHHSKVIIIEEHSIRGGLASEFNDFLATYG 587
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CHLPN (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia pneumoniae GN=dxs PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.296e-33 Identity = 84/220 (38.18%), Postives = 120/220 (54.55%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPR---GNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 DVGIAE HAVTF+AG+A G C+IYS+FL R D V HDV +Q LPV FA+DRAGL DG +H G +D++F+ +P M++ P + + + +++ PS R+P +G PN +P G L +G+ V I+ G++ + + L + IS TV D F KP D DL L H +IT+EE S+ GG S +F+ Sbjct: 369 DVGIAEGHAVTFSAGIAKAGNPVICSIYSTFLHRALDNVFHDVCMQDLPVIFAIDRAGLAYGDGRSHHGIYDMSFLRAMPQMIICQPRSQV-VFQQLLYSSLHWSSPSAIRYPNIPAPHGDPLTGDPNFLRSP---GNAETLSQGEDVLIIALGTLCFTALSIKHQLLAYGISATVVDPIFIKPFDNDLFSLLLMSHSKVITIEEHSIRGGLASEFNNFV 584
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CAMHC (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dxs PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.296e-33 Identity = 88/227 (38.77%), Postives = 125/227 (55.07%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTP-LEIGKGRILMEGD--RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEI-LITVEEGSVGGFGSHVCHFLTLSGILD 669 DV IAEQHAVT A +A EG KP+ IYS+F+QR YDQV+HD+ + L AMDRAG+VG DG TH G FDI+F++ +PN+ + AP DE M+ + + + R+PRG+ +L K P + GK +L E + A++GYG+ V + + L D + D F KPLD + + LA + +I I + GG G + FL + I D Sbjct: 346 DVAIAEQHAVTSMAAMAKEGFKPYITIYSTFMQRAYDQVIHDLAIMNLSAVIAMDRAGIVGEDGETHEGCFDISFLNAIPNVSMCAPRDEQSFKDMI-EYSYVHEGLLAIRYPRGS---FILHEQFKDAPKISRGKSVLLRENKNAKTALIGYGNGVGRAYEVSIKL---DFETDLIDLVFAKPLDKEFLINLAKKDKIWYIFSDSVKKGGIGDILSAFLQENKIYD 565
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS1_STRCO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Streptomyces coelicolor GN=dxs1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.296e-33 Identity = 82/215 (38.14%), Postives = 124/215 (57.67%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHV 636 DVGIAEQHA AAGLA+ G+ P A+Y++FL R +DQ++ DV L + V F +DRAG+ G DG +H G +D++ + +P + + AP D +L + A +DD P+ RFP+ +G +P ++ IG +L DR V ++ G + C+ AA +L+++ I TV D R+ KP+D L LA H ++ VE+ S G GS V Sbjct: 362 DVGIAEQHAAVSAAGLATGGLHPVVAVYATFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADQLRTQLREAVAVDDAPTLLRFPK-ESVGPAVPAVDR-----IGGLDVLHTADRSEVLLVAVGVMAPVCLGAAELLEARGIGCTVVDPRWVKPVDPAL-APLAARHRLVAVVEDNSRAAGVGSAV 569
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_LEIXX (1-deoxy-D-xylulose-5-phosphate synthase OS=Leifsonia xyli subsp. xyli GN=dxs PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 85/224 (37.95%), Postives = 125/224 (55.80%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGI 663 DVGIAEQHAVT AAGLA G+ P AIY++F+ R +DQV+ DV L K V F +DRAG+ G DGP+H G +D+ + +P + + AP D +A A + D P+ RFP+G+ +P + + +L E D+ V ++ G + + A L +Q I TV D R+ P+ ++ LA H I++T+E+G VGG G+ V L +GI Sbjct: 364 DVGIAEQHAVTSAAGLAFGGLHPVVAIYATFMNRAFDQVLMDVALHKAGVTFVLDRAGVTGPDGPSHHGIWDLAILQVVPGIRLAAPRDATRFREELAEAVAVADAPTVLRFPKGS-----VPADIEAVRRRDDGVDVLHESDQKDVLLVTVGPMAGLGLRVAEALAAQGIGATVVDPRWVVPVPRSVL-DLAAGHRIVVTMEDGIRVGGIGTRVRQDLREAGI 581
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_STRC1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces sp. (strain CL190) GN=dxs PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.327e-33 Identity = 79/215 (36.74%), Postives = 125/215 (58.14%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHV 636 DVGIAEQHA AAGLA+ G+ P A+Y++FL R +DQ++ DV L + V F +DRAG+ G DG +H G +D++ + +P + + AP D + + A +DD P+ RFP+ +G +P ++ +G +L +R V ++ G + Q C+ A +L+++ I TV D R+ KP+D ++ LA EH ++ VE+ S G GS V Sbjct: 362 DVGIAEQHAAVSAAGLATGGLHPVVAVYATFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADHVRAQLREAVAVDDAPTLIRFPK-ESVGPRIPALDR-----VGGLDVLHRDERPEVLLVAVGVMAQVCLQTAELLRARGIGCTVVDPRWVKPVD-PVLPPLAAEHRLVAVVEDNSRAAGVGSAV 569
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_FUSNN (1-deoxy-D-xylulose-5-phosphate synthase OS=Fusobacterium nucleatum subsp. nucleatum GN=dxs PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.327e-33 Identity = 77/222 (34.68%), Postives = 124/222 (55.86%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 D GIAE VT AAGLA G KP+ IYS+F+QR Q++HDV +Q LPVRF +DR+G+VG DG TH G +D++F + N V+ P+ EL + + + P R PR ++ N+ PLEIG+ +++ +G + + G++++ + + L+++ I T+ A KPLD + + E++ + +EE V FG+ + F +GI Sbjct: 338 DTGIAEGFTVTLAAGLAKSGKKPYVCIYSTFIQRAISQLIHDVSIQNLPVRFIIDRSGIVGEDGKTHNGIYDLSFFLSIQNFTVLCPTTAKELGQALEISKNFNLGPLVIRIPR----DSIFDIENE-EPLEIGRWKVIKKGSKNLFIATGTMLKIILEIYDKLQNRGIYCTIISAASVKPLDENYLLNYIKEYDNIFVLEENYVKNSFGTAILEFFNDNGI 554
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS1_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Streptomyces avermitilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.327e-33 Identity = 78/213 (36.62%), Postives = 123/213 (57.75%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHV 636 DVGIAEQHA AAGLA+ G+ P A+Y++FL R +DQ++ DV L + V F +DRAG+ G DG +H G +D++ + +P + + AP D +L + A +DD P+ RFP+ +G +P + +++ E +V ++ G + C+ AA +L+++ I TV D R+ KP+D L LA EH ++ VE+ S G G+ V Sbjct: 362 DVGIAEQHAAVSAAGLATGGLHPVVAVYATFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSILQVVPGLRIAAPRDADQLRAQLREAVAVDDAPTLLRFPK-ESVGPAIPAVDHVGGMDV--LHRFPESPQVLLVAVGVMAPVCLQAAELLEARGIGCTVVDPRWVKPVDPSL-PGLAAEHRLVAVVEDNSRAAGVGAAV 570 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |