FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.194e-75 Identity = 142/223 (63.68%), Postives = 169/223 (75.78%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG KPF A+YS+FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD F++ LP VVMA +DEAEL HMV TA D P FR+PRG G+G +P +G L IGKGRI+ EG +VA+L +G+ + C+LAA L + +S TVADARF KPLD DLIRQ A HE++ITVEEGSVGGFGS V +L+ G+LD Sbjct: 366 DVGIAEQHAVTFAAGLAAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPV--RGEILRIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQFARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLD 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_GLUOX (1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans GN=dxs PE=3 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 1.194e-75 Identity = 145/230 (63.04%), Postives = 171/230 (74.35%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR-------VAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAG+ASEG++PFCAIYS+FLQR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH GAFD+ ++ CLPNMVVMAPSDE EL+H ATA D P FR+PRGNGIG LP KG LEIGKGRI+ E R VAIL G + + + AA+ L +Q + VTVADARF KP+D L+ LA +HE+ IT+EEG++GGF S V L +G+LD Sbjct: 383 DVGIAEQHAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDLNYLCCLPNMVVMAPSDEVELLHATATACEYDAGPIAFRYPRGNGIGLDLP--EKGEVLEIGKGRIVREARRAPNARGGVAILSLGPRMHESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQHLAETGLLD 610
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.194e-75 Identity = 143/224 (63.84%), Postives = 174/224 (77.68%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTF+AG+A+ G+KPFCAIYSSFLQRGYDQ+VHDV LQ LPVRF +DRAGLVGADGPTH GAFDI ++S LPNM VMA +DEAEL+HM+ATAA +D P R+PRG G G LP ++G LEIGKGR++ +G VAIL +G+ +++ AA L+++ +SVTVADARF KPLDT LI L +H LITVE+G+V GFG V H L +G LDG Sbjct: 365 DVGIAEQHAVTFSAGMAAGGLKPFCAIYSSFLQRGYDQIVHDVALQSLPVRFMIDRAGLVGADGPTHAGAFDIGYLSALPNMTVMACADEAELVHMMATAAAHNDGPIALRYPRGEGTGVALP--DQGDVLEIGKGRVIQDGHDVAILSFGAHLEEAKDAATALEARGLSVTVADARFAKPLDTTLIDDLMTKHSALITVEQGAVLGFGGLVLHHLAATGQLDG 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_PELUB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelagibacter ubique GN=dxs PE=3 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.036e-75 Identity = 139/223 (62.33%), Postives = 174/223 (78.03%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG KP+ AIYS+FLQR YDQVVHDV +Q LPVRF +DRAGLVGADG TH G+FDIT++S LPN +VMAPSDEAEL+ M T+ I+++P R+PRGNGIG LP ++ +EIGKGR++ EG +V IL G+ +++C +AA LK++ I T+ DARF KPLD +LI + A EHE +ITVEEGS+GGFGSHV + L+ GI D Sbjct: 364 DVGIAEQHAVTFAAGLATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVRFIIDRAGLVGADGSTHAGSFDITYLSTLPNFIVMAPSDEAELVKMTNTSMTINNKPCAIRYPRGNGIGVELPSIDEN--IEIGKGRVIQEGKQVCILSIGTRLEECKIAAAELKNKGIESTIVDARFAKPLDQELILKCAREHEAMITVEEGSIGGFGSHVENLLSEKGIFD 584
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.036e-75 Identity = 142/224 (63.39%), Postives = 165/224 (73.66%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA+EG +PFCA+YS+FLQRGYDQVVHDV LQ LPVRFA+DRAGLVGADG TH GAFD+ ++CLP VMAP+DEAEL HM+ATA D P FRFPRG G+G P KG L IGKGR++ EG +A L G+ + C+ A L S IS TVADARF KP+D +LI LA H L+ VEEGSVGGFGS V FL+ G++DG Sbjct: 365 DVGIAEQHAVTFAAGLAAEGYRPFCALYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDLAMLTCLPGFTVMAPADEAELTHMIATAVGHDAGPIAFRFPRGEGVGVERP--EKGERLPIGKGRVVREGQDIAFLSLGTRLAACLDVAERLSSLGISATVADARFAKPIDRELIAHLARTHAALVVVEEGSVGGFGSQVLQFLSDEGLMDG 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_NOVAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 5.925e-75 Identity = 136/224 (60.71%), Postives = 175/224 (78.12%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA+EG++PFCAIYS+FLQR +DQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD+T+++ LPN+VVMA +DEAEL+HM TAA+ D P FR+PRGNG+G LP LEIGKGRI+ +G +VA+L G+ + + + AA+ L ++ +S TVAD RF KPLD LIRQL H++++TVEEGS+GG G+HV + G++DG Sbjct: 366 DVGIAEQHAVTFAAGLAAEGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNLVVMAAADEAELVHMTYTAALHDSGPIAFRYPRGNGVGVPLP--EVPERLEIGKGRIIRQGSKVALLSLGTRLAEALKAADQLDARGLSTTVADLRFAKPLDVALIRQLMTTHDVIVTVEEGSIGGLGAHVLTMASDEGLVDG 587
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS1_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs1 PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 5.925e-75 Identity = 140/224 (62.50%), Postives = 170/224 (75.89%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA EG+KPF A+YSSFLQRGYDQVVHDV LQKLPVRFA+DRAG VGADG TH G FD+ F+ CLPN+VVM +DEAEL MV TAA D P R+PRG G+G +P + + PL IGKGRI+ EG VA+L G+ +Q C+ A +L ++ ++ TVADARF KP D +L+ LA HE+LI VEEG++GGFG+HV +LT G+LDG Sbjct: 368 DVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDG 589
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 7.738e-75 Identity = 145/226 (64.16%), Postives = 171/226 (75.66%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILM---EGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG KPFCA+YS+FLQR YDQVVHDV LQ LPVRF +DRAGLVGADG TH GAFDI F++CLP M VMAP+DEAEL+HM+AT DD PS RFPRG G+G P +G L IGKGRI+ EGD +A+L G+ + C+ AA L++ +VTVADARF KPLD +L+ +LA H L+TVEEGSVGGFGSHV +T G+LD Sbjct: 365 DVGIAEQHAVTFAAGLAAEGFKPFCALYSTFLQRAYDQVVHDVALQGLPVRFIIDRAGLVGADGATHAGAFDIAFLACLPGMTVMAPADEAELVHMMATMVAFDDGPSAVRFPRGEGVGVERP--ERGEVLPIGKGRIVHGTGEGD-IALLSLGTRLAACLDAAERLEAAGFTVTVADARFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLD 587
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SILST (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter sp. (strain TM1040) GN=dxs PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.724e-74 Identity = 142/223 (63.68%), Postives = 170/223 (76.23%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD 669 DVGIAEQH VTFAA LA+ G+KPFCA+YS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FDI FM+ LP MVVMA +DEAEL HMVATAA D P FR+PRG G G +P + LEIGKGRI+ EG RVA+L +G+ + + AA L ++ I+ TVADARF KPLD D+I LA +HE LIT+EEG+VGGFGSHV L+ + D Sbjct: 370 DVGIAEQHGVTFAAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAFMANLPGMVVMAAADEAELKHMVATAAAYDAGPIAFRYPRGEGEGVEMP--EQPEVLEIGKGRIIEEGSRVALLSFGTRLGEVRKAAEALAARGITPTVADARFAKPLDRDMILSLAEKHEALITIEEGAVGGFGSHVAQLLSEEAVFD 590
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS2_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.117e-73 Identity = 139/224 (62.05%), Postives = 168/224 (75.00%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDG 672 DVGIAEQHAVTFAAGLA EG+KPF A+YSSFLQRGYDQVVHDV LQKLPVRFA+DRAG VGADG TH G FD+ F+ CLPN+VVM +DEAEL MV TAA D P R+PRG G+G +P + + PL IGKGRI+ EG VA+L G+ +Q C+ A +L ++ ++ TVADARF KP D +L+ LA HE+LI VEEG++GGF SHV +L G+LDG Sbjct: 368 DVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDG 589 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |