FC931283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_RALME (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dxs PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.566e-59 Identity = 124/227 (54.63%), Postives = 156/227 (68.72%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGI 663 DVGIAEQHAVTFA GLA EG+KP AIYS+FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADG TH G +DI F+ C+PNM+VM P+DE E ++ T A D P+ R+PRG G+G P + T L +GKG I E G RVAI+ +GS+V + AA + + TVA+ RF KPLD +L++QLA H+ L+TVEEG ++GG GS V L +GI Sbjct: 365 DVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMVPADENECRQLL-TTAFQQDCPTAVRYPRGAGVGVATQP--ELTALPVGKGEIRREGHARAGQRVAIMAFGSMVHPALTAA-----EQLDATVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAVLEALAEAGI 583
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CHRVO (1-deoxy-D-xylulose-5-phosphate synthase OS=Chromobacterium violaceum GN=dxs PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.566e-59 Identity = 123/222 (55.41%), Postives = 152/222 (68.47%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 DV IAEQHAVTFA G+A +G+KP AIYS+FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADGPTH GAFD++++ C+PNM VMAPSDE E ++ TA + D P+ R+PRG G GA + P IGKG + G +VAIL +GS+V + AA L TVAD RF KPLD +LIR+LA HE+++TVEE V GG GS L G+ Sbjct: 360 DVAIAEQHAVTFAGGMACDGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVMFALDRAGLVGADGPTHAGAFDLSYLRCIPNMTVMAPSDENECRQLLYTAFQL-DTPTAVRYPRGTGPGAEIQQQMAALP--IGKGVVRRRGKQVAILAFGSMVHPALAAAEAL-----DATVADMRFVKPLDAELIRKLAQTHELIVTVEENVVMGGAGSGCGEALQAMGL 573
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_THIDA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dxs PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.046e-59 Identity = 121/223 (54.26%), Postives = 156/223 (69.96%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGIL 666 DVGIAEQHA+TFAAGLA EGVKP AIYS+FLQR YDQ++HD+ LQ LPV A+DRAGLVGADGPTH G+FD++F+ C+P++V+ APSDE E +++T A + D P+ R+PRG G GA + P + P+EIGKG G VA+L +GS+V + AA L TVAD RF KPLD DL+ +LA H +L+T+EE +V GG G+ V L GI+ Sbjct: 359 DVGIAEQHALTFAAGLACEGVKPVVAIYSTFLQRAYDQLIHDIALQNLPVTLAIDRAGLVGADGPTHAGSFDLSFLRCVPDLVIAAPSDENECRRLLST-AFLHDGPAAVRYPRGCGTGAAIEPGLE--PVEIGKGVCRRRGRDVALLAFGSLVAPALTAAERL-----DATVADMRFVKPLDVDLVGELAAGHRLLVTLEENAVAGGAGAAVAELLAQLGIV 573
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_MAGSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetococcus sp. (strain MC-1) GN=dxs PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.490e-59 Identity = 123/224 (54.91%), Postives = 160/224 (71.43%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILD 669 DVGIAEQHAVTFAAGLA+EG+ P AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH GA+D++++ +P M +MAP+DE EL HM+ TA + ++P R+PRG +G LPP LEIG+GR L +G+ AIL G V + AA +L+ Q ISV+V DARF KPLD L++++A H +++ VEE +V GGFGS V L+ G LD Sbjct: 361 DVGIAEQHAVTFAAGLATEGILPVVAIYSTFMQRAYDQLIHDVALQDLPVIFALDRAGLVGADGATHAGAYDLSYLRTVPGMTIMAPADENELRHMLHTAVAL-NKPVALRYPRGTALG--LPPEPPHV-LEIGRGRTLRKGEHAAILAVGQPVHPALEAAAILEQQGISVSVYDARFVKPLDQRLLQEVA-MHGVVLVVEENAVQGGFGSAVLESLSNQGALD 579
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_CUPTR (1-deoxy-D-xylulose-5-phosphate synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dxs PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.558e-59 Identity = 126/227 (55.51%), Postives = 156/227 (68.72%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGI 663 DVGIAEQHAVTFA GLA EG+KP AIYS+FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADG TH GA+DI ++ C+PNM+VM PSDE E ++ T A D P+ R+PRG+G GA + + P+ +GKG + E G RV L +GS+VQ + AA L TVAD RF KPLD L+++LA +H+ L+TVEEGSV GG GS V L +GI Sbjct: 365 DVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLL-TTAFQQDCPTAVRYPRGSGPGAAIAADL--APVPVGKGVVRREAGARAGHRVGFLAFGSMVQPALGAAEAL-----DATVADMRFVKPLDVALVKRLAADHDYLVTVEEGSVMGGAGSAVLEALAEAGI 583
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_MICAN (1-deoxy-D-xylulose-5-phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=dxs PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.953e-59 Identity = 118/223 (52.91%), Postives = 147/223 (65.92%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGIL 666 DVGIAEQHAVT A GLA EG++P IYS+FLQR +DQ++HD+ +Q LPV F MDRAG+VGADGPTH G +DI ++ C+PNM +MAP DEAEL MV T P R+PRGNG+G L L IGKG IL GD + +LGYG++V + A +L I TV +ARF KPLDT+LI LA ++T+EEG +GGFGS V L + IL Sbjct: 365 DVGIAEQHAVTLAGGLACEGMRPVVTIYSTFLQRAFDQIIHDICIQNLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPIAMRYPRGNGLGVPLMEEG-WEALPIGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEHGIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAVLEALQDANIL 586
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SHEHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=dxs PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 7.774e-59 Identity = 116/217 (53.46%), Postives = 150/217 (69.12%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 D IAEQHAVTF AG A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T +D P+ R+PRG+ GA T + IGKG + +G ++AIL +G+ + C++AA L TVAD RF KPLD +L+++LA H++L+TVEE ++ GG GS V L Sbjct: 365 DAAIAEQHAVTFGAGFACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRIVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA--KQVETMTAMPIGKGLLKRQGQKIAILNFGTTLASCLVAAEAL-----DATVADMRFVKPLDVELVKELAANHDVLVTVEENAIMGGAGSGVLELL 574
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_SYNAS (1-deoxy-D-xylulose-5-phosphate synthase OS=Syntrophus aciditrophicus (strain SB) GN=dxs PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.015e-58 Identity = 117/217 (53.92%), Postives = 154/217 (70.97%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFL 648 DVGIAEQH+VTFAAGLA+EG+ P AIYSSFLQR YDQ++HDV LQ LPV FA+DRAG VG DGPTH G FD++++ +PNMVVMAP DE EL HM+ T AV +P+ R+PRG+G+G + +++ LE+GKG +L EG +AIL G V + AA L+ + I TV +ARF KPLD +L+ ++ + ++TVEE + GGFGS + FL Sbjct: 378 DVGIAEQHSVTFAAGLATEGILPVVAIYSSFLQRAYDQILHDVCLQNLPVVFALDRAGFVGEDGPTHHGLFDLSYLRSIPNMVVMAPKDENELQHMLHT-AVACGKPAAVRYPRGSGVGVTM--DSQPFSLELGKGEVLCEGGSLAILAVGDPVHPALTAAVQLREEGIYATVVNARFVKPLDRELLLRIVRSFKKILTVEENVLTGGFGSAILEFL 591
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_PROMP (1-deoxy-D-xylulose-5-phosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxs PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.015e-58 Identity = 116/217 (53.46%), Postives = 156/217 (71.89%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFL 648 DVGIAEQHAVT AAG++ +G+KP AIYS+FLQR +DQ++HDV +Q LPV F +DRAG+VGADGPTH G +DI++M +PN V+MAP DEAEL M+ T ++ P+ R PRG+G+G V + PL+IG+G IL EGD V I+ YGS+VQ AN+LK++ IS + +ARF +PLD DLI L + + ++T+EEG+ VGGFGS + L Sbjct: 365 DVGIAEQHAVTLAAGMSCDGLKPVVAIYSTFLQRAFDQLIHDVGIQNLPVSFVLDRAGIVGADGPTHQGQYDISYMRAIPNFVLMAPKDEAELQRMLIT-SINYKGPTALRIPRGSGLG-VAVMDEGWEPLKIGEGEILEEGDDVLIIAYGSMVQSATETANLLKNRGISACIINARFVRPLDQDLIIPLVRKLKKVVTMEEGTLVGGFGSAIVEML 579
BLAST of FC931283 vs. ExPASy Swiss-Prot
Match: DXS_VIBPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio parahaemolyticus GN=dxs PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.262e-58 Identity = 118/223 (52.91%), Postives = 158/223 (70.85%), Query Frame = 1 Query: 1 DVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGIL 666 DV IAEQHAVT A G+A G P AIYS+FLQRGYDQ++HD+ + LPV FA+DRAGLVGADG TH GAFD++FM C+PNMV+MAPSDE E M+ T PS R+PRG+G+G + + T LEIGKGR++ +G++VAIL +G+ + + AA ++++ TVAD RF KPLD LIRQLA+EH++L+T+EE ++ GG G+ V F+ I+ Sbjct: 365 DVAIAEQHAVTLATGMAIAGDHPIVAIYSTFLQRGYDQLIHDIAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAVRYPRGSGMGTEI--EKEFTALEIGKGRVVRKGEKVAILSFGTFLPNALEAA-----KNLNATVADMRFVKPLDEALIRQLADEHDVLVTLEENAIAGGAGAGVIEFMMKEKII 579 The following BLAST results are available for this feature:
BLAST of FC931283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931283 ID=FC931283; Name=FC931283; organism=Citrus clementina; type=EST; length=677bpback to top |