FC931287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931287 vs. ExPASy Swiss-Prot
Match: PCY1B_RAT (Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus GN=Pcyt1b PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 279 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 683 VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++ CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F + + I+T+ + RI+ Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIV 210
BLAST of FC931287 vs. ExPASy Swiss-Prot
Match: PCY1B_MOUSE (Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 279 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 683 VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++ CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F + + I+T+ + RI+ Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIV 210
BLAST of FC931287 vs. ExPASy Swiss-Prot
Match: PCY1B_HUMAN (Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 279 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 683 VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++ CRYVDEVI APW +T + + I V H + ++ G D Y+ K G+F + + I+T+ + RI+ Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIV 210
BLAST of FC931287 vs. ExPASy Swiss-Prot
Match: ECT1_SCHPO (Probable ethanolamine-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe GN=SPAC15E1.05c PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 43/136 (31.62%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 279 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIA 686 +++DG D FH GH + +A+QLG+ L++GI++D+ ++ ++G P+M L ER LS C++VDEV+ AP+ + + + VVHG + +T G D Y AK+ + ++ + ++TT + R+++ Sbjct: 11 LWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNKGP--PVMTLEERCLSANTCKWVDEVVPSAPYVFDLEWMRRYGCQYVVHG--DDISTDANG-DDCYRFAKAADQYLEVKRTEGVSTTELLDRLLS 141 HSP 2 Score: 77.7962 bits (190), Expect = 6.197e-14 Identity = 49/172 (28.49%), Postives = 86/172 (50.00%), Query Frame = 3 Query: 6 DGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNDASLPRDPLRAIQSKDAHLSQFLPT-------SRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAP 494 +G D Y AK +Y ++KRTEGVS+T+++ R+LSS+ + S D LR + L+ F ++ + P ++YIDG +DLF H+ L+ ++ G ++ GI+ D+ E P+++L ER L++L C+Y+ +++G P Sbjct: 107 NGDDCYRFAKAADQYLEVKRTEGVSTTELLDRLLSSVPLEIYSTPVSVLSSQIDLLRRFATDSDGLTPFTDVFIYNTEKPETLISGTTLLRLNPEKNIIYIDGDWDLFTEKHISALELCTRMFPGIPIMAGIFADEKCFE-----KPMLNLLERILNLLQCKYISSILVGPP 273
BLAST of FC931287 vs. ExPASy Swiss-Prot
Match: PCY1_YEAST (Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae GN=PCT1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 61/228 (26.75%), Postives = 105/228 (46.05%), Query Frame = 3 Query: 27 LAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNDASL-PRDPLRA---IQSKDAHLSQFLPTSRRIVQ---FSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 683 L KK +Q + TE + D +++K +++ D L PR R + K+A + LP R + F P +Y DG FDLFH GH++ L++ ++ L+VG+ +D+I + +G ++ +R ++ CR+VDEV+ APW VT + + I V H + + D Y+ K MG F + ++T+ + +II Sbjct: 23 LFKKNKNKRQREETEEQDNED--------KDESKNQDENKDTQLTPRKRRRLTKEFEEKEARYTNELPKELRKYRPKGFRFNLPPTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGL--TVLTDKQRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPYVS---ADSDDIYKPIKEMGKFLTTQRTNGVSTSDIITKII 237
BLAST of FC931287 vs. ExPASy Swiss-Prot
Match: PCY1_SCHPO (Probable choline-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1827.02c PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 44/137 (32.12%), Postives = 73/137 (53.28%), Query Frame = 3 Query: 279 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 683 VY DG FDLFH GH+ L++A+++ L+VG+ DQ+ HR +M+ ER+ ++ C++VDEV+ APW +T + + I V H + + D Y K +G F + + ++T+ + RII Sbjct: 104 VYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLT--HRLKGLTVMNDKERAEALRHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYAS---DDSGDIYLPVKKVGKFIPTKRTEGVSTSDLITRII 235
BLAST of FC931287 vs. ExPASy Swiss-Prot
Match: PCY1_CAEEL (Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis elegans GN=F08C6.2 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12 Identity = 42/137 (30.66%), Postives = 69/137 (50.36%), Query Frame = 3 Query: 279 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 683 +Y DG +DLFH GH L++ +++ +L+VG+ D+ +++G + ER V CRYVDEV APW T + + + + H + G+ D YE + G+F E + ++T+ V RII Sbjct: 83 IYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKG--RTVTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYV---APGEEDLYEKFRREGMFLETERTEGVSTSDVVCRII 214
BLAST of FC931287 vs. ExPASy Swiss-Prot
Match: TAGD_BACSU (Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis GN=tagD PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 3 Query: 291 GAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI-VSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHG 551 G FDL H GH+++L++A+QLGD+L+V I TD+ + + + +YH H R L + RYVDEVI WE K I NI + V G Sbjct: 8 GTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEH---RKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMG 92 The following BLAST results are available for this feature:
BLAST of FC931287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931287 ID=FC931287; Name=FC931287; organism=Citrus clementina; type=EST; length=700bpback to top |