FC931292

Overview
NameFC931292
Unique NameFC931292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 1.780e-114
Identity = 201/230 (87.39%), Postives = 210/230 (91.30%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKNGTCPWLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKP+IP KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGR IIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVP+PLSVFVDSYGTG IPDKEILKIVKE FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGRDD D
Sbjct:  148 LGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRMIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGNIPDKEILKIVKETFDFRPGMIAINLDLKRGGNNRFLKTAAYGHFGRDDAD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 2.325e-114
Identity = 199/230 (86.52%), Postives = 211/230 (91.74%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKNGTCPWLRPDGKTQVT+EY NE GAMVP RVHTVLISTQHDETVTND+IAADLK+HVIKPVIP+KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDKEIL+++KENFDFRPGMI+INLDLKRGGNGRF KTAAYGHFGRDDPD
Sbjct:  148 LGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGSIPDKEILELIKENFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 3.036e-114
Identity = 200/230 (86.96%), Postives = 214/230 (93.04%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGA+LT+VRKNGTCPWLRPDGKTQVTVEY N+ GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPV+P++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPGMI+INLDLKRGGN RF+KTAAYGHFGRDDPD
Sbjct:  151 LGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDGGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGN-RFIKTAAYGHFGRDDPD 379          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 3.036e-114
Identity = 201/230 (87.39%), Postives = 212/230 (92.17%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGA+LT+VRKNGTC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTN++IAADLK+HVIKPVIP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKENFDFRPGMISINLDLKRGGN RF KTAAYGHFGRDDPD
Sbjct:  148 LGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 3.966e-114
Identity = 200/230 (86.96%), Postives = 212/230 (92.17%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGA+LT+VRKNGTC WLRPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAY+ RQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTG+IPDKEILKIVKENFDFRPGMI INLDLK+GGNGR+LKTAAYGHFGRDDPD
Sbjct:  151 LGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPD 380          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 410.609 bits (1054), Expect = 3.966e-114
Identity = 200/230 (86.96%), Postives = 212/230 (92.17%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGA+LT+VRKNGTC WLRPDGKTQVTVEY NE+GA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP++YLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAY+ RQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTG+IPDKEILKIVKENFDFRPGMI INLDLK+GGNGR+LKTAAYGHFGRDDPD
Sbjct:  151 LGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPD 380          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 3.966e-114
Identity = 201/225 (89.33%), Postives = 209/225 (92.89%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFG 676
            LGAKLT+VRKNGTCPWLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKP+IP KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE FDFRPGMISINLDLKRGGNGRFLKTAAYGHFG
Sbjct:  148 LGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFG 372          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 409.838 bits (1052), Expect = 6.764e-114
Identity = 203/230 (88.26%), Postives = 212/230 (92.17%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGA+LT+VRKNGTC WLRPDGKTQVTVEY N+ GAMVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIPDKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGM++INLDLKRGGN RF+KTAAYGHFGR+DPD
Sbjct:  150 LGARLTEVRKNGTCAWLRPDGKTQVTVEYLNDAGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFIKTAAYGHFGREDPD 378          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 1.507e-113
Identity = 199/230 (86.52%), Postives = 213/230 (92.61%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGA+LT+VRKNGTCPWLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVASGLARRCIVQ+SYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKE FDFRPGMI+INLDL +GG+ R+LKTAAYGHFGRDDPD
Sbjct:  152 LGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKETFDFRPGMIAINLDLLKGGS-RYLKTAAYGHFGRDDPD 380          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 1.968e-113
Identity = 197/230 (85.65%), Postives = 211/230 (91.74%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            +GA+LT+VRKNGTC WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA DLK+HVIKP+IP+KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE FDFRPGM++INLDLKRGGNGRF KTAAYGHFGRDDPD
Sbjct:  148 IGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKETFDFRPGMMTINLDLKRGGNGRFQKTAAYGHFGRDDPD 377          
The following BLAST results are available for this feature:
BLAST of FC931292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_DAUCA1.780e-11487.39S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK2_PICSI2.325e-11486.52S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK_DENCR3.036e-11486.96S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK2_SUASA3.036e-11487.39S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK1_ORYSJ3.966e-11486.96S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI3.966e-11486.96S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_DAUCA3.966e-11489.33S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK2_ORYSJ6.764e-11488.26S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK1_BETVU1.507e-11386.52S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK2_ARATH1.968e-11385.65S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34103E11EF PostHarvP1 Citrus clementina cDNA clone C34103E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931292 ID=FC931292; Name=FC931292; organism=Citrus clementina; type=EST; length=691bp
GCTTGGTGCTAAGCTTACAGACGTGAGGAAGAATGGGACCTGTCCGTGGC
TGAGGCCAGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAAT
GGCGCCATGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCA
CGATGAGACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATG
TGATCAAGCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTC
CATCTTAACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGC
TGGGCTCACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGGGGG
CACACGGTGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGA
AGCGGTGCTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGG
GCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACGCTATTGGTGTGCCCG
AGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACTGGGAAGATCCCTGAC
AAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGATTTTAGGCCTGGGAT
GATTTCTATTAATCTTGATCTCAAGAGGGGTGGCAACGGCAGGTTCTTGA
AGACTGCCGCTTATGGGCACTTTGGCAGAGATGATCCTGAT
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