FC931292

Overview
NameFC931292
Unique NameFC931292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_PROM4 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.023e-54
Identity = 117/243 (48.15%), Postives = 155/243 (63.79%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTN--------DEIAADLKQHVIKPVIPDKYLD---DKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKR---GGNGRFLK-TAAYGHFGRDD 685
            L  +L  +R  GT  +L PDGKTQV+V Y N      P+ + T++ISTQH   + +        + I  DL ++V+KP   D  L    +KT F +NP+G+FV+GGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AKSIVA+ LA+R  VQ+SYAIGV  P+S+ V++YG+GK+ ++E+ K+VK++FD RPG I    +LK      +GRF + TAAYGHFGR D
Sbjct:  152 LARQLAKIRHQGTLKYLLPDGKTQVSVIYENNE----PIAIDTIVISTQHTSEIDDLSSEADIRERITKDLWEYVVKPATSDLKLQPNQEKTRFLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKSIVAAKLAKRVEVQLSYAIGVANPVSILVEAYGSGKMSNQELTKVVKKHFDLRPGAIIEQFNLKNLPSKRSGRFYRDTAAYGHFGRPD 390          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_HAEIN (S-adenosylmethionine synthetase OS=Haemophilus influenzae GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.023e-54
Identity = 108/224 (48.21%), Postives = 152/224 (67.86%), Query Frame = 2
Query:   11 KLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRD 682
            K ++VRK+G   WLRPD K+QVT++Y +       V V  V++STQH E V+  ++   + + +IKPV+P ++L  +T F +NP+GRFVIGGP GD GLTGRKII+DTY             K+P+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIGV EP S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+
Sbjct:  148 KQSEVRKSGKLAWLRPDAKSQVTLKYEDNK----IVGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKEPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE 364          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_HAEIG (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittGG) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.023e-54
Identity = 108/224 (48.21%), Postives = 151/224 (67.41%), Query Frame = 2
Query:   11 KLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRD 682
            K  +VRK+G   WLRPD K+QVT++Y +       V V  V++STQH E V+  ++   + + +IKPV+P ++L  +T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+
Sbjct:  148 KQAEVRKSGKLAWLRPDAKSQVTLKYEDNK----IVGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE 364          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_BURTA (S-adenosylmethionine synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.023e-54
Identity = 110/224 (49.11%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   20 DVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            ++R++G  PWLRPD K+QVTV Y +      P  + TV++STQH   +    +   + + +IKP +P   +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA R ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E+FD RP  I   LDL R     + KTAAYGHFGR++P+
Sbjct:  154 NLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPDIDLPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPE 370          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_ACTPJ (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.023e-54
Identity = 106/220 (48.18%), Postives = 147/220 (66.82%), Query Frame = 2
Query:   23 VRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRD 682
            VRK+G   WLRPD K+Q+T  Y N       V +  V++STQH E V+  ++   + + +IKPV+P ++L   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ +NFD RP  +   LDL R     + +TAAYGHFGR+
Sbjct:  152 VRKSGKLDWLRPDAKSQLTFAYENNK----IVGIDAVVLSTQHAEHVSQKDLVEGVMEEIIKPVLPSEWLSQNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE 364          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_ACTP7 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.023e-54
Identity = 106/220 (48.18%), Postives = 147/220 (66.82%), Query Frame = 2
Query:   23 VRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRD 682
            VRK+G   WLRPD K+Q+T  Y N       V +  V++STQH E V+  ++   + + +IKPV+P ++L   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++K++ +NFD RP  +   LDL R     + +TAAYGHFGR+
Sbjct:  152 VRKSGKLDWLRPDAKSQLTFAYENNK----IVGIDAVVLSTQHAEHVSQKDLVEGVMEEIIKPVLPSEWLSQNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNETLVKLIYQNFDLRPYGLIKMLDLIR---PIYRETAAYGHFGRE 364          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_XYLFA (S-adenosylmethionine synthetase OS=Xylella fastidiosa GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.866e-54
Identity = 107/218 (49.08%), Postives = 147/218 (67.43%), Query Frame = 2
Query:   26 RKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGR 679
            + N   PWLRPD K Q+T+ Y  E+G  V   +  V++STQHD  +   ++   +++ ++KPV+P K+L   T FH+NP+G+FVIGGP GD GLTGRKII+DTY             KDP+KVDRS +Y VR  AK++VA+GLA RC VQVSYAIGV EP+S+ V ++GTGKI D +I K+++++FD RP  I   LDL    +  +  +A+YGHFGR
Sbjct:  155 KSNSPLPWLRPDAKAQITLRY--EDG--VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGSARHGGGAFSGKDPSKVDRSASYAVRYVAKNVVAAGLADRCEVQVSYAIGVAEPISISVTTFGTGKISDDKIEKLIRQHFDLRPYGIIKMLDLI---HPIYQPSASYGHFGR 365          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_PHOLL (S-adenosylmethionine synthetase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.866e-54
Identity = 109/220 (49.55%), Postives = 145/220 (65.91%), Query Frame = 2
Query:   20 DVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGR 679
            +VRKNG  PWLRPD K+QVT +Y N+      V V  V++STQH E ++  ++   + + +IKPV+P ++L+  T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+++GT K+    +  +V+E FD RP  +   LDL    +  +  TAAYGHFGR
Sbjct:  151 EVRKNGVLPWLRPDAKSQVTFQYNNDK----IVGVDAVVLSTQHAENISQKDLQEAVMEEIIKPVLPAEWLNPTTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVSTATLTLLVREFFDLRPHGLIQMLDLL---HPIYRDTAAYGHFGR 363          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_HAEIE (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittEE) GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.866e-54
Identity = 108/224 (48.21%), Postives = 151/224 (67.41%), Query Frame = 2
Query:   11 KLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRD 682
            K  +VRK+G   WLRPD K+QVT++Y +       V V  V++STQH E V+  ++   + + +IKPV+P ++L  +T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+
Sbjct:  148 KQAEVRKSGKLAWLRPDAKSQVTLKYEDNK----IVGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPTEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE 364          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_HAEI8 (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain 86-028NP) GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.866e-54
Identity = 108/224 (48.21%), Postives = 151/224 (67.41%), Query Frame = 2
Query:   11 KLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRD 682
            K  +VRK+G   WLRPD K+QVT++Y +       V V  V++STQH E V+  ++   + + +IKPV+P ++L  +T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA+GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+
Sbjct:  148 KQAEVRKSGKLAWLRPDAKSQVTLKYEDNK----IVGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPTEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE 364          
The following BLAST results are available for this feature:
BLAST of FC931292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PROM46.023e-5448.15S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_HAEIN6.023e-5448.21S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_HAEIG6.023e-5448.21S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_BURTA6.023e-5449.11S-adenosylmethionine synthetase OS=Burkholderia th... [more]
METK_ACTPJ6.023e-5448.18S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_ACTP76.023e-5448.18S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_XYLFA7.866e-5449.08S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_PHOLL7.866e-5449.55S-adenosylmethionine synthetase OS=Photorhabdus lu... [more]
METK_HAEIE7.866e-5448.21S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_HAEI87.866e-5448.21S-adenosylmethionine synthetase OS=Haemophilus inf... [more]

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Properties
Property NameValue
Genbank descriptionC34103E11EF PostHarvP1 Citrus clementina cDNA clone C34103E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931292 ID=FC931292; Name=FC931292; organism=Citrus clementina; type=EST; length=691bp
GCTTGGTGCTAAGCTTACAGACGTGAGGAAGAATGGGACCTGTCCGTGGC
TGAGGCCAGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAAT
GGCGCCATGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCA
CGATGAGACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATG
TGATCAAGCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTC
CATCTTAACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGC
TGGGCTCACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGGGGG
CACACGGTGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGA
AGCGGTGCTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGG
GCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACGCTATTGGTGTGCCCG
AGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACTGGGAAGATCCCTGAC
AAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGATTTTAGGCCTGGGAT
GATTTCTATTAATCTTGATCTCAAGAGGGGTGGCAACGGCAGGTTCTTGA
AGACTGCCGCTTATGGGCACTTTGGCAGAGATGATCCTGAT
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