FC931292

Overview
NameFC931292
Unique NameFC931292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.118e-108
Identity = 192/230 (83.48%), Postives = 205/230 (89.13%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  148 LGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.460e-108
Identity = 191/230 (83.04%), Postives = 205/230 (89.13%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPVIP +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  148 LGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 1.460e-108
Identity = 191/230 (83.04%), Postives = 205/230 (89.13%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPV+P +YLDD TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGV EPLSVFVD+Y TGKI DK+IL ++KENFDFRPGMI+INLDLKRGGN R+ KTAAYGHFGRDDPD
Sbjct:  148 LGAKLTEVRKNSTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIANDLKKHVIKPVVPAQYLDDNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.461e-108
Identity = 188/230 (81.74%), Postives = 205/230 (89.13%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKN TCPWLRPDGKTQVTVEY N+NGAM+P+RVHT+LISTQHDETVTND+IA DLK+HVIKPV+P +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  148 LGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 2.753e-107
Identity = 189/230 (82.17%), Postives = 205/230 (89.13%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTN++IA DLK+HVIKPVIP +YLDD+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGV EPLSVFVD++ TGKIPDK+IL ++KENFDFRPGMI+INLDLKRGGN R+ KTAA GH GRDDPD
Sbjct:  148 LGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNEQIAQDLKEHVIKPVIPAQYLDDQTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 8.009e-107
Identity = 186/230 (80.87%), Postives = 204/230 (88.70%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKN TCPWLRPDGKTQVTVEY N+NGAM+P+RVHT+LISTQHDETVTND+IA DLK+HVIKPV+P +YLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVD+Y TG IP K++L ++KENFDFRPGM+SINLDL RGGN R+ KTAAYGHFGRDDPD
Sbjct:  148 LGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 8.855e-106
Identity = 187/230 (81.30%), Postives = 203/230 (88.26%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LGAKLT+VRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDE VTN++IA DLK+HVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KENFDFRPGMI+INLDL RGGN R+ KTAAYGHFGRD+ D
Sbjct:  148 LGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDEGVTNEQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGEGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEAD 377          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.082e-103
Identity = 185/224 (82.59%), Postives = 198/224 (88.39%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHF 673
            LGA LT+VRKNGTCPWLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRF  GGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVR+AAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL IVKE FDFRPGMISI+LDL RGGNGRF + +    F
Sbjct:  150 LGASLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFRHGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 8.577e-101
Identity = 175/230 (76.09%), Postives = 196/230 (85.22%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 691
            LG KLT+VRKNG CPWLRPDGKTQVTVEY  E GAM+P RVHT+LISTQH+  VTN++I  DL +HVIKPV+P KYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKS+VASGLA+RC+VQVSY+I V EPLSVFVD+YGTG +PD EILK+++++FDFRPG+I  NLDLKRGGN R+ KTAAYGHFGRDDPD
Sbjct:  151 LGYKLTEVRKNGVCPWLRPDGKTQVTVEYKREGGAMIPQRVHTILISTQHNPDVTNEKIREDLMEHVIKPVVPAKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPD 380          
BLAST of FC931292 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.501e-92
Identity = 168/228 (73.68%), Postives = 185/228 (81.14%), Query Frame = 2
Query:    2 LGAKLTDVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDD 685
            LG +LT VRK+GTCPW+ PDGKTQVT+EY NE GAMVP RVHT+LISTQH E VTN++IA DL   VIK V+P+KYLD  TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKS+VA+GLARRC+ Q+SYAIGV EPLSV VD+YGTGKIPD EIL  VK  FDFRPGM+   LDLKRGGN R+  TAAYGHFGRD+
Sbjct:  147 LGHRLTVVRKDGTCPWVLPDGKTQVTIEYENEGGAMVPKRVHTILISTQHIEGVTNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYISRQAAKSVVAAGLARRCLFQISYAIGVAEPLSVHVDTYGTGKIPDSEILAKVKAAFDFRPGMMGKALDLKRGGNKRYQTTAAYGHFGRDE 374          
The following BLAST results are available for this feature:
BLAST of FC931292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SOLTU1.118e-10883.48S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK1_TOBAC1.460e-10883.04S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_ACTCH1.460e-10883.04S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK1_PETHY9.461e-10881.74S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK3_CATRO2.753e-10782.17S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_PETHY8.009e-10780.87S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK2_TOBAC8.855e-10681.30S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK2_PEA1.082e-10382.59S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_CHLRE8.577e-10176.09S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU2.501e-9273.68S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionC34103E11EF PostHarvP1 Citrus clementina cDNA clone C34103E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931292 ID=FC931292; Name=FC931292; organism=Citrus clementina; type=EST; length=691bp
GCTTGGTGCTAAGCTTACAGACGTGAGGAAGAATGGGACCTGTCCGTGGC
TGAGGCCAGATGGCAAAACACAAGTCACTGTTGAGTATTACAATGAGAAT
GGCGCCATGGTTCCTGTTCGTGTCCATACTGTGCTCATCTCAACTCAGCA
CGATGAGACTGTAACTAATGATGAGATTGCTGCAGATCTCAAGCAACATG
TGATCAAGCCTGTGATTCCTGACAAGTACTTGGATGACAAAACTATTTTC
CATCTTAACCCATCTGGCCGTTTTGTGATTGGTGGCCCTCACGGTGATGC
TGGGCTCACCGGCCGGAAGATTATTATTGATACTTATGGTGGCTGGGGGG
CACACGGTGGTGGGGCTTTCTCAGGGAAAGATCCTACCAAGGTTGATAGA
AGCGGTGCTTACATTGTAAGGCAAGCTGCTAAGAGTATTGTGGCAAGCGG
GCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACGCTATTGGTGTGCCCG
AGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACTGGGAAGATCCCTGAC
AAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGATTTTAGGCCTGGGAT
GATTTCTATTAATCTTGATCTCAAGAGGGGTGGCAACGGCAGGTTCTTGA
AGACTGCCGCTTATGGGCACTTTGGCAGAGATGATCCTGAT
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