FC931293

Overview
NameFC931293
Unique NameFC931293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAAB (Uridine kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=udk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.027e-17
Identity = 49/141 (34.75%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRD 689
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRD 145          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAA9 (Uridine kinase OS=Staphylococcus aureus (strain JH9) GN=udk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.027e-17
Identity = 49/141 (34.75%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRD 689
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRD 145          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAA8 (Uridine kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=udk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.027e-17
Identity = 49/141 (34.75%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRD 689
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRD 145          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAA3 (Uridine kinase OS=Staphylococcus aureus (strain USA300) GN=udk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.027e-17
Identity = 49/141 (34.75%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRD 689
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRD 145          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAA2 (Uridine kinase OS=Staphylococcus aureus (strain JH1) GN=udk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.027e-17
Identity = 49/141 (34.75%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRD 689
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRD 145          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAA1 (Uridine kinase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=udk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.027e-17
Identity = 49/141 (34.75%), Postives = 85/141 (60.28%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRD 689
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRD 145          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAHJ (Uridine kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=udk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16
Identity = 52/158 (32.91%), Postives = 91/158 (57.59%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D S +     ++ N+D P   D D L+EN++ L+ G AV+VP YD+ + +R    T+      ++I+EGI+AL  K LR ++D+++ V       +++R+ RD     R+     +QYLN
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLIENLKDLRNGHAVEVPTYDYTNHTR-SNETIAFEPKDVIIVEGIFALENKTLRDMMDVKIYVDTDADLRILRRLVRDTKERGRSMESVINQYLN 162          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAS1 (Uridine kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=udk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16
Identity = 52/158 (32.91%), Postives = 89/158 (56.33%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D S +     ++ N+D P   D D L++N+  L+ GK V+VP YD+ + +R    T+      ++I+EGI+AL  K LR L+D+++ V       +++R+ RD     R      +QYLN
Sbjct:    6 IIGIAGGSGSGKTSVTNEIMKNLEGHSVALLAQDYYYKDQSHLTFDERLETNYDHPFAFDNDLLIDNLNDLRNGKQVEVPTYDYSNHTR-SKETIAFEPKDVIIVEGIFALENKTLRDLMDVKIYVDTDADLRILRRLLRDTEERGRTMESVINQYLN 162          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_MACCJ (Uridine kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=udk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 48/147 (32.65%), Postives = 84/147 (57.14%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNYNDSS------RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLAR 707
            ++G+AG SG+GKT  T K+L  +   S+A+I  D Y  +         +  N+D P   D + L++N++ L+ GK V+VP YD+ + +R   +T+      ++I+EGI+AL +  LR L+D+++ V       +++R+ RDI    R
Sbjct:    6 IIGIAGGSGSGKTSVTSKILKNLEGYSVALIEQDYYYKNQDHLTFEERLKTNYDHPFAFDNELLIQNLKDLRNGKTVEVPTYDYSNHTR-SEKTITFEPKDVIIVEGIFALENSNLRDLMDVKIYVDTDADLRILRRIVRDIEERGR 151          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BORHD (Uridine kinase OS=Borrelia hermsii (strain DAH) GN=udk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 45/139 (32.37%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            ++G+AG SG+GKT    K+   +P   +I+ DNY  S        +D NFD P   D +   + ++ +KE K + +P+YDF +  R    T+E+  + +VI+EGI   + E++R LIDL++ +        ++R+ RD+
Sbjct:    4 IIGIAGGSGSGKTTIVNKISEVIPEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKIKENKLIHMPLYDFINHRRKD-ETVEIVPTPVVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDM 141          
The following BLAST results are available for this feature:
BLAST of FC931293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
URK_STAAB5.027e-1734.75Uridine kinase OS=Staphylococcus aureus (strain bo... [more]
URK_STAA95.027e-1734.75Uridine kinase OS=Staphylococcus aureus (strain JH... [more]
URK_STAA85.027e-1734.75Uridine kinase OS=Staphylococcus aureus (strain NC... [more]
URK_STAA35.027e-1734.75Uridine kinase OS=Staphylococcus aureus (strain US... [more]
URK_STAA25.027e-1734.75Uridine kinase OS=Staphylococcus aureus (strain JH... [more]
URK_STAA15.027e-1734.75Uridine kinase OS=Staphylococcus aureus (strain Mu... [more]
URK_STAHJ1.463e-1632.91Uridine kinase OS=Staphylococcus haemolyticus (str... [more]
URK_STAS12.495e-1632.91Uridine kinase OS=Staphylococcus saprophyticus sub... [more]
URK_MACCJ5.558e-1632.65Uridine kinase OS=Macrococcus caseolyticus (strain... [more]
URK_BORHD2.112e-1532.37Uridine kinase OS=Borrelia hermsii (strain DAH) GN... [more]

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Properties
Property NameValue
Genbank descriptionC34103E12EF PostHarvP1 Citrus clementina cDNA clone C34103E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931293 ID=FC931293; Name=FC931293; organism=Citrus clementina; type=EST; length=739bp
GGTTCATCTTGATTCCTAAGAATTCACTGTTCCAAAAAAAGGAAAAAAAA
TCAAAGAAAAGCAAGGGAGGGAATATATATTGTGGAACTTATATGGCTCA
GGACACTTCTTCAGGTGCTGATTCACCTCGACGACGACCTGGTCTGTTGC
GAGATCAGGTTCAGTTGGTTAAGAAGAAGGACTCTGATCGCTATGAGATT
GTTCCTATAGAAGATACATTGTCATTTGAAAAAGGTTTTTTCATAGTAAT
TCGTGCATGCCAATTGTTGGCTCAAAAGAATCATGGGATAATATTAGTTG
GAGTAGCAGGTCCCTCCGGAGCTGGAAAGACTGTCTTCACTGAGAAGGTG
CTCAACTTTATGCCCAGTATTGCTGTGATAACCATGGACAACTACAACGA
TTCTAGTCGTATCATTGATGGCAACTTCGATGACCCGCGCTTGACAGATT
ATGACACACTGCTTGAAAACATTCGTGGTTTAAAGGAAGGGAAAGCTGTT
CAAGTCCCAATTTACGACTTCAAGTCTAGTTCTCGCATTGGTTACAGGAC
ACTTGAAGTCCCTAGCTCCCGCATTGTGATTATTGAAGGCATCTATGCCT
TAAGTGAAAAACTGCGGCCTTTGATAGATCTTCGTGTATCTGTTACGGGT
GGAGTTCATTTTGATCTCGTAAAGCGAGTTTTTCGTGACATTCACGTGTT
GGCCAGAGCCTGAAGAGATAATCATCAATATCTGAACGG
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