FC931293

Overview
NameFC931293
Unique NameFC931293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRS7 (Uridine kinase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=udk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 50/143 (34.97%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +LN  P+  IA+I  D+Y  D S I     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R   RT       ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILNSFPNARIAMIQHDSYYKDQSHISFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKEHTR-SNRTFRQEPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDM 147          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STREM (Uridine kinase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=udk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 50/143 (34.97%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +LN  P+  IA+I  D+Y  D S I     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R   RT       ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILNSFPNARIAMIQHDSYYKDQSHISFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKEHTR-SNRTFRQEPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDM 147          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRE4 (Uridine kinase OS=Streptococcus equi subsp. equi (strain 4047) GN=udk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 50/143 (34.97%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +LN  P+  IA+I  D+Y  D S I     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R   RT       ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILNSFPNARIAMIQHDSYYKDQSHISFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKEHTR-SNRTFRQEPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDM 147          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BORT9 (Uridine kinase OS=Borrelia turicatae (strain 91E135) GN=udk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 45/139 (32.37%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            ++G+ G SG+GKT    K+   +P   +I+ DNY  S        +D NFD P   D +   ++++ LKE K + +P+YDF +  R    T+E+  + +VI+EGI   + E++R LIDL++ +        ++R+ RD+
Sbjct:    4 IIGITGGSGSGKTTVVNKISEVIPEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKHLKKLKENKLIHMPLYDFINHKRKD-ETVEIVPTPVVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDM 141          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STACT (Uridine kinase OS=Staphylococcus carnosus (strain TM300) GN=udk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.602e-15
Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737
            ++G+AG SG+GKT  T ++L+ +   S+A+I  D Y  D S +     +  N+D P   D D L++N+  L+ G  V+VP YD+ + +R    T+      ++I+EGI+AL  K LR L+D+++ V       +++R+ RD     R+      QYLN
Sbjct:    6 IIGIAGGSGSGKTSVTNEILHNLEGHSVALIAQDYYYKDQSHLTFEERLKTNYDHPFAFDNDLLIQNLMDLRNGIPVEVPTYDYVNHTR-SAETIAFQPKDVIIVEGIFALENKTLRDLMDVKIYVDTDADLRILRRLMRDTKERGRSMESVIEQYLN 162          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAES (Uridine kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=udk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 50/158 (31.65%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737
            ++G+AG SG+GKT  T  ++  +   S+A++  D Y  D S +     ++ N+D P   D D L+ N++ L+ GK V+VP YD+   +R    T+      ++I+EGI+AL +  LR ++D+++ V       +++R+ RD     R      +QYLN
Sbjct:    6 IIGIAGGSGSGKTTVTNAIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLIHNLKDLRNGKPVEVPTYDYSQHTR-SKETIAFDPKDVIIVEGIFALENNTLRDMMDVKIYVDTDADLRILRRLTRDTKERGRTMESVINQYLN 162          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STAEQ (Uridine kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=udk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 50/158 (31.65%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737
            ++G+AG SG+GKT  T  ++  +   S+A++  D Y  D S +     ++ N+D P   D D L+ N++ L+ GK V+VP YD+   +R    T+      ++I+EGI+AL +  LR ++D+++ V       +++R+ RD     R      +QYLN
Sbjct:    6 IIGIAGGSGSGKTTVTNAIMKNLEGHSVALLAQDYYYKDQSHLTFEERLETNYDHPFAFDNDLLIHNLKDLRNGKPVEVPTYDYSQHTR-SKETIAFDPKDVIIVEGIFALENNTLRDMMDVKIYVDTDADLRILRRLTRDTKERGRTMESVINQYLN 162          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BORBZ (Uridine kinase OS=Borrelia burgdorferi (strain ZS7) GN=udk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15
Identity = 51/155 (32.90%), Postives = 81/155 (52.26%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDS-----SRIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737
            ++G++G SG+GKT    K+  F+P   +I+ DNY  S           NFD P   D +   E+++ LK+   + +P+YDF +  R     L VP+  +VI+EGI   + E++R LIDL++ +        ++R+ RDI    R       QYLN
Sbjct:    4 IIGISGGSGSGKTTVVSKISEFIPEFVLISQDNYYKSVGDYEHEFSKVNFDHPDAFDNNLFYEHLKNLKKNSPIDMPLYDFINHKRQLKTVLVVPTP-VVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLRRDISKRGRTVESVIDQYLN 157          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BORBU (Uridine kinase OS=Borrelia burgdorferi GN=udk PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15
Identity = 51/155 (32.90%), Postives = 81/155 (52.26%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDS-----SRIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737
            ++G++G SG+GKT    K+  F+P   +I+ DNY  S           NFD P   D +   E+++ LK+   + +P+YDF +  R     L VP+  +VI+EGI   + E++R LIDL++ +        ++R+ RDI    R       QYLN
Sbjct:    4 IIGISGGSGSGKTTVVSKISEFIPEFVLISQDNYYKSVGDYEHEFSKVNFDHPDAFDNNLFYEHLKNLKKNSPIDMPLYDFINHKRQLKTVLVVPTP-VVIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLRRDISKRGRTVESVIDQYLN 157          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BORGA (Uridine kinase OS=Borrelia garinii GN=udk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14
Identity = 49/155 (31.61%), Postives = 82/155 (52.90%), Query Frame = 3
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737
            ++G++G SG+GKT    K+  F+P   +I+ DNY  S           NFD P   D +   E+++ LK+   + +P+YDF +  R   +T+ V  + ++I+EGI   + E++R LIDL++ +        ++R+ RDI    R       QYLN
Sbjct:    4 IIGISGGSGSGKTTVVSKISEFIPEFVLISQDNYYKSVGDYEYEFSKVNFDHPDAFDNNLFYEHLKNLKKNSPIDMPLYDFINHKR-QLKTVMVVPTPVIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLKRDISKRGRTLESVIDQYLN 157          
The following BLAST results are available for this feature:
BLAST of FC931293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
URK_STRS72.758e-1534.97Uridine kinase OS=Streptococcus equi subsp. zooepi... [more]
URK_STREM2.758e-1534.97Uridine kinase OS=Streptococcus equi subsp. zooepi... [more]
URK_STRE42.758e-1534.97Uridine kinase OS=Streptococcus equi subsp. equi (... [more]
URK_BORT92.758e-1532.37Uridine kinase OS=Borrelia turicatae (strain 91E13... [more]
URK_STACT3.602e-1533.54Uridine kinase OS=Staphylococcus carnosus (strain ... [more]
URK_STAES4.705e-1531.65Uridine kinase OS=Staphylococcus epidermidis (stra... [more]
URK_STAEQ4.705e-1531.65Uridine kinase OS=Staphylococcus epidermidis (stra... [more]
URK_BORBZ6.145e-1532.90Uridine kinase OS=Borrelia burgdorferi (strain ZS7... [more]
URK_BORBU6.145e-1532.90Uridine kinase OS=Borrelia burgdorferi GN=udk PE=1... [more]
URK_BORGA1.048e-1431.61Uridine kinase OS=Borrelia garinii GN=udk PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC34103E12EF PostHarvP1 Citrus clementina cDNA clone C34103E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931293 ID=FC931293; Name=FC931293; organism=Citrus clementina; type=EST; length=739bp
GGTTCATCTTGATTCCTAAGAATTCACTGTTCCAAAAAAAGGAAAAAAAA
TCAAAGAAAAGCAAGGGAGGGAATATATATTGTGGAACTTATATGGCTCA
GGACACTTCTTCAGGTGCTGATTCACCTCGACGACGACCTGGTCTGTTGC
GAGATCAGGTTCAGTTGGTTAAGAAGAAGGACTCTGATCGCTATGAGATT
GTTCCTATAGAAGATACATTGTCATTTGAAAAAGGTTTTTTCATAGTAAT
TCGTGCATGCCAATTGTTGGCTCAAAAGAATCATGGGATAATATTAGTTG
GAGTAGCAGGTCCCTCCGGAGCTGGAAAGACTGTCTTCACTGAGAAGGTG
CTCAACTTTATGCCCAGTATTGCTGTGATAACCATGGACAACTACAACGA
TTCTAGTCGTATCATTGATGGCAACTTCGATGACCCGCGCTTGACAGATT
ATGACACACTGCTTGAAAACATTCGTGGTTTAAAGGAAGGGAAAGCTGTT
CAAGTCCCAATTTACGACTTCAAGTCTAGTTCTCGCATTGGTTACAGGAC
ACTTGAAGTCCCTAGCTCCCGCATTGTGATTATTGAAGGCATCTATGCCT
TAAGTGAAAAACTGCGGCCTTTGATAGATCTTCGTGTATCTGTTACGGGT
GGAGTTCATTTTGATCTCGTAAAGCGAGTTTTTCGTGACATTCACGTGTT
GGCCAGAGCCTGAAGAGATAATCATCAATATCTGAACGG
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