FC931293

Overview
NameFC931293
Unique NameFC931293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BACHD (Uridine kinase OS=Bacillus halodurans GN=udk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.202e-14
Identity = 45/148 (30.41%), Postives = 82/148 (55.41%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDN---YNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLAR 707
            I++GVAG +G+GKT   +++       +++ ++    Y D S++     +  N+D P   D D L+E++  L  G+A++ P+YD+K  +R     L  P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RDI    R
Sbjct:    6 IIIGVAGGTGSGKTTVAKEIFYQFNEKSIVLIEQDAYYKDQSQLSLEERLQTNYDHPLAFDNDLLIEHLHSLLNGQAIEKPVYDYKLHTRSNEVILVEPKD-VIILEGILLLEDERLRELMDIKLFVDTDADIRIIRRMVRDIRERGR 152
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BACA2 (Uridine kinase OS=Bacillus amyloliquefaciens (strain FZB42) GN=udk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.202e-14
Identity = 49/149 (32.89%), Postives = 83/149 (55.70%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            +++G+AG SG+GKT  T  +       SI +I  D  Y D S +     ++ N+D P   D D L+E+I+ L   + ++ PIYD+K  +R    T+ V    ++I+EGI  L +K LR L+D+++ V       +++R+ RDI+   R+
Sbjct:    6 VVIGIAGGSGSGKTSVTRSIYEQFKGHSILMIQQDLYYKDQSHLPFEERLNTNYDHPLAFDNDYLIEHIQELLNYRPIEKPIYDYKLHTR-SEETIPVEPKDVIILEGILVLEDKRLRDLMDMKLYVDTDADLRIIRRIMRDINERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_UREU1 (Uridine kinase OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=udk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 43/145 (29.66%), Postives = 85/145 (58.62%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMP---SIAVITMDNYNDSSRIIDGN------FDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIH 695
            ILV +AG SG+GKT F  +++  +P   +  +I  D+Y  S+  ++ N      +D P   ++D + E +  +K+ K ++VPIYD+K+  R+  +T+++    +++ EGIYA+  + +  + DL+V +       L++R+ RD++
Sbjct:    7 ILVLIAGASGSGKTTFANEIVARIPQNTTSVIICQDSYYISNSQLNKNERRLINYDHPSSFEWDLMREQLSDIKKRKKIKVPIYDYKTEIRLD-KTIDISDVDVIVFEGIYAIYDDVINQIADLKVFIETPKDECLIRRILRDVN 150
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BORRA (Uridine kinase OS=Borrelia recurrentis (strain A1) GN=udk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 42/139 (30.22%), Postives = 78/139 (56.12%), Query Frame = 3 
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            ++G++G SG+GKT    K+   +    +I+ DNY  S        +D NFD P   D +   + ++ LKE +++ +P+YDF +  R    T+++  + I+I+EGI   + E++R LIDL++ +        ++R+ RD+
Sbjct:    4 IIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMPLYDFINHKRRD-ETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDM 141
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BORDL (Uridine kinase OS=Borrelia duttonii (strain Ly) GN=udk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 42/139 (30.22%), Postives = 78/139 (56.12%), Query Frame = 3 
Query:  294 LVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSS-----RIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYA-LSEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            ++G++G SG+GKT    K+   +    +I+ DNY  S        +D NFD P   D +   + ++ LKE +++ +P+YDF +  R    T+++  + I+I+EGI   + E++R LIDL++ +        ++R+ RD+
Sbjct:    4 IIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMPLYDFINHKRRD-ETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDM 141
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRPZ (Uridine kinase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=udk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDM 147
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRPG (Uridine kinase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=udk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDM 147
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRP8 (Uridine kinase OS=Streptococcus pyogenes serotype M18 GN=udk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDM 147
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRP6 (Uridine kinase OS=Streptococcus pyogenes serotype M6 GN=udk PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDM 147
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRP3 (Uridine kinase OS=Streptococcus pyogenes serotype M3 GN=udk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     +  N+D P   D D +++ ++ L  G+ V +PIYD+K  +R      + P   ++I+EGI  L  E+LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFMIQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQD-VIIVEGILVLEDERLRDLMDIKLFVDTDDDIRIIRRIKRDM 147
The following BLAST results are available for this feature:
BLAST of FC931293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
URK_BACHD5.202e-1430.41Uridine kinase OS=Bacillus halodurans GN=udk PE=3 ... [more]
URK_BACA25.202e-1432.89Uridine kinase OS=Bacillus amyloliquefaciens (stra... [more]
URK_UREU16.794e-1429.66Uridine kinase OS=Ureaplasma urealyticum serovar 1... [more]
URK_BORRA6.794e-1430.22Uridine kinase OS=Borrelia recurrentis (strain A1)... [more]
URK_BORDL6.794e-1430.22Uridine kinase OS=Borrelia duttonii (strain Ly) GN... [more]
URK_STRPZ8.873e-1432.87Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRPG8.873e-1432.87Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP88.873e-1432.87Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP68.873e-1432.87Uridine kinase OS=Streptococcus pyogenes serotype ... [more]
URK_STRP38.873e-1432.87Uridine kinase OS=Streptococcus pyogenes serotype ... [more]

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Properties
Property NameValue
Genbank descriptionC34103E12EF PostHarvP1 Citrus clementina cDNA clone C34103E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931293 ID=FC931293; Name=FC931293; organism=Citrus clementina; type=EST; length=739bp
GGTTCATCTTGATTCCTAAGAATTCACTGTTCCAAAAAAAGGAAAAAAAA
TCAAAGAAAAGCAAGGGAGGGAATATATATTGTGGAACTTATATGGCTCA
GGACACTTCTTCAGGTGCTGATTCACCTCGACGACGACCTGGTCTGTTGC
GAGATCAGGTTCAGTTGGTTAAGAAGAAGGACTCTGATCGCTATGAGATT
GTTCCTATAGAAGATACATTGTCATTTGAAAAAGGTTTTTTCATAGTAAT
TCGTGCATGCCAATTGTTGGCTCAAAAGAATCATGGGATAATATTAGTTG
GAGTAGCAGGTCCCTCCGGAGCTGGAAAGACTGTCTTCACTGAGAAGGTG
CTCAACTTTATGCCCAGTATTGCTGTGATAACCATGGACAACTACAACGA
TTCTAGTCGTATCATTGATGGCAACTTCGATGACCCGCGCTTGACAGATT
ATGACACACTGCTTGAAAACATTCGTGGTTTAAAGGAAGGGAAAGCTGTT
CAAGTCCCAATTTACGACTTCAAGTCTAGTTCTCGCATTGGTTACAGGAC
ACTTGAAGTCCCTAGCTCCCGCATTGTGATTATTGAAGGCATCTATGCCT
TAAGTGAAAAACTGCGGCCTTTGATAGATCTTCGTGTATCTGTTACGGGT
GGAGTTCATTTTGATCTCGTAAAGCGAGTTTTTCGTGACATTCACGTGTT
GGCCAGAGCCTGAAGAGATAATCATCAATATCTGAACGG
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