FC931293

Overview
NameFC931293
Unique NameFC931293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_CHLPN (Uridine kinase OS=Chlamydia pneumoniae GN=udk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 44/143 (30.77%), Postives = 78/143 (54.55%), Query Frame = 3
Query:  288 IILVGVAGPSGAGKTVFTEKVLN-FMPSIAVITMDNY-NDSSRIIDGN-----FDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            ++++G+ G SGAGKT  T+ +   F   ++VI  DNY  D S           +D P   D D L+ +I+ LK  + VQ P++DF   +R       +  S+++++EGI    +++LR L+D+R+ V       +++R+ RD+
Sbjct:    6 MMIIGITGGSGAGKTTLTQNIKEIFGEDVSVICQDNYYKDRSHYTPEERANLIWDHPDAFDNDLLISDIKRLKNNEIVQAPVFDFVLGNRSKTEIETIYPSKVILVEGILVFENQELRDLMDIRIFVDTDADERILRRMVRDV 148          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: UCKL1_HUMAN (Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 46/144 (31.94%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  297 VGVAGPSGAGKTVFTEKVLNFM--PSIAVITMDNY--------NDSSRIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSR-IGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            +G+ G S +GKT     ++  +  P + +++MD++         + +   + NFD P   D+D ++  ++ LK+GK+V+VPIYDF + SR   ++TL    + ++I EGI A ++K L  L+D+++ V       LV+R+ RDI
Sbjct:  101 IGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSVKVPIYDFTTHSRKKDWKTLY--GANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRLRRDI 242          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: UCKA_DICDI (Uridine-cytidine kinase A OS=Dictyostelium discoideum GN=udkA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 47/144 (32.64%), Postives = 84/144 (58.33%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-------NDSSRIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            +++GV G S +GKT   +K++  +    + +++MD++       ND S+    NFD P   DYD +++ I  L+ GK V +P Y FK+ SR+ ++   V  + ++I+EGI  L S++LR L+D+++ +       L +R+ RDI
Sbjct:   72 LVIGVCGGSASGKTTVCDKIIANLNVRWVVLLSMDSFYKNLSKDNDPSKY---NFDHPNAFDYDLMVKTISELRAGKKVNIPKYCFKTHSRLVHQD-TVYGADVIILEGILTLYSKELRDLMDIKIFIDTDDDVRLARRLKRDI 211          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_VIBHB (Uridine kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=udk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13
Identity = 50/156 (32.05%), Postives = 83/156 (53.21%), Query Frame = 3
Query:  279 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLAR 707
            N+  ++VG+AG S +GK++    + N +        I VIT D  YND S++     +  N+D P   D+D L E++  L  G+AV+VP Y +   +R    T   P  +++I+EGI  L++ +LR L+   V +   +   L++RV RD+    R
Sbjct:    4 NNQCVIVGIAGASASGKSLIASTIYNELREKVGDHQIGVITEDCYYNDQSQLSMEERVKTNYDHPSALDHDLLCEHLEKLVRGEAVEVPEYSYTEHTRTSNTTPMTP-KKVIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRDVEERGR 158          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRA5 (Uridine kinase OS=Streptococcus agalactiae serotype V GN=udk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13
Identity = 45/143 (31.47%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +L+  P   I +I  D+Y  D S +     +  N+D P   D + ++E +  L EG+ V +P+YD+   +R   RT+      ++I+EGI  L  ++LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSNFPDQKITMIEHDSYYKDQSHLTFEERVKTNYDHPLAFDTNLMIEQLNELIEGRPVDIPVYDYTKHTR-SDRTIRQEPQDVIIVEGILVLEDQRLRDLMDIKLFVDTDDDIRIIRRIKRDM 147          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRA3 (Uridine kinase OS=Streptococcus agalactiae serotype III GN=udk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13
Identity = 45/143 (31.47%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +L+  P   I +I  D+Y  D S +     +  N+D P   D + ++E +  L EG+ V +P+YD+   +R   RT+      ++I+EGI  L  ++LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSNFPDQKITMIEHDSYYKDQSHLTFEERVKTNYDHPLAFDTNLMIEQLNELIEGRPVDIPVYDYTKHTR-SDRTIRQDPQDVIIVEGILVLEDQRLRDLMDIKLFVDTDDDIRIIRRIKRDM 147          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRA1 (Uridine kinase OS=Streptococcus agalactiae serotype Ia GN=udk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13
Identity = 45/143 (31.47%), Postives = 79/143 (55.24%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDI 692
            I++GV G SG GKT  +  +L+  P   I +I  D+Y  D S +     +  N+D P   D + ++E +  L EG+ V +P+YD+   +R   RT+      ++I+EGI  L  ++LR L+D+++ V       +++R+ RD+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSNFPDQKITMIEHDSYYKDQSHLTFEERVKTNYDHPLAFDTNLMIEQLNELIEGRPVDIPVYDYTKHTR-SDRTIRQEPQDVIIVEGILVLEDQRLRDLMDIKLFVDTDDDIRIIRRIKRDM 147          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_BACP2 (Uridine kinase OS=Bacillus pumilus (strain SAFR-032) GN=udk PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13
Identity = 42/142 (29.58%), Postives = 79/142 (55.63%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDN---YNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRD 689
            +++G+AG SG+GKT  T  +       +++ +     Y + S +     +  N+D P   D D + E++  L   ++++ PIYDFK ++R    T+ V    ++I+EGI+AL  E+LR L+D+++ V       +++R+ RD
Sbjct:    6 VVIGIAGGSGSGKTSVTNSIYEKFKGHSILMLQQDLYYKNQSHMPFEECLLTNYDHPLAFDNDLMFEHLEQLLRYESIEKPIYDFKLNTR-SEETVHVEPKDVIIVEGIFALEDERLRDLMDIKLYVDTDADLRIIRRILRD 146          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_TOLAT (Uridine kinase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 48/160 (30.00%), Postives = 84/160 (52.50%), Query Frame = 3
Query:  267 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLAR 707
            ++  N   +++G+AG S +GK++    + N + +      I VIT D  Y D S +     I  N+D P   D+  L E+++ L  GKAV +P Y +   +R   +T+     RI+I+EGI  L++  LR L+++ + +   +   LV+R+ RD+    R
Sbjct:    1 MSDTNPDCVIIGIAGASASGKSLIARTIYNELTAELGEDQIGVITEDCYYKDQSHLPMAERIKTNYDHPAAFDHALLAEHLKQLMAGKAVDIPTYSYSEHTRTD-QTIRFTPKRIIILEGILLLNDSALRKLLNVSIFMDTPLDICLVRRLARDVQERGR 159          
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRZT (Uridine kinase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153          
The following BLAST results are available for this feature:
BLAST of FC931293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
URK_CHLPN4.404e-1330.77Uridine kinase OS=Chlamydia pneumoniae GN=udk PE=3... [more]
UCKL1_HUMAN4.404e-1331.94Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=... [more]
UCKA_DICDI4.404e-1332.64Uridine-cytidine kinase A OS=Dictyostelium discoid... [more]
URK_VIBHB5.751e-1332.05Uridine kinase OS=Vibrio harveyi (strain ATCC BAA-... [more]
URK_STRA55.751e-1331.47Uridine kinase OS=Streptococcus agalactiae serotyp... [more]
URK_STRA35.751e-1331.47Uridine kinase OS=Streptococcus agalactiae serotyp... [more]
URK_STRA15.751e-1331.47Uridine kinase OS=Streptococcus agalactiae serotyp... [more]
URK_BACP25.751e-1329.58Uridine kinase OS=Bacillus pumilus (strain SAFR-03... [more]
URK_TOLAT7.511e-1330.00Uridine kinase OS=Tolumonas auensis (strain DSM 91... [more]
URK_STRZT7.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae (strain... [more]

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Properties
Property NameValue
Genbank descriptionC34103E12EF PostHarvP1 Citrus clementina cDNA clone C34103E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931293 ID=FC931293; Name=FC931293; organism=Citrus clementina; type=EST; length=739bp
GGTTCATCTTGATTCCTAAGAATTCACTGTTCCAAAAAAAGGAAAAAAAA
TCAAAGAAAAGCAAGGGAGGGAATATATATTGTGGAACTTATATGGCTCA
GGACACTTCTTCAGGTGCTGATTCACCTCGACGACGACCTGGTCTGTTGC
GAGATCAGGTTCAGTTGGTTAAGAAGAAGGACTCTGATCGCTATGAGATT
GTTCCTATAGAAGATACATTGTCATTTGAAAAAGGTTTTTTCATAGTAAT
TCGTGCATGCCAATTGTTGGCTCAAAAGAATCATGGGATAATATTAGTTG
GAGTAGCAGGTCCCTCCGGAGCTGGAAAGACTGTCTTCACTGAGAAGGTG
CTCAACTTTATGCCCAGTATTGCTGTGATAACCATGGACAACTACAACGA
TTCTAGTCGTATCATTGATGGCAACTTCGATGACCCGCGCTTGACAGATT
ATGACACACTGCTTGAAAACATTCGTGGTTTAAAGGAAGGGAAAGCTGTT
CAAGTCCCAATTTACGACTTCAAGTCTAGTTCTCGCATTGGTTACAGGAC
ACTTGAAGTCCCTAGCTCCCGCATTGTGATTATTGAAGGCATCTATGCCT
TAAGTGAAAAACTGCGGCCTTTGATAGATCTTCGTGTATCTGTTACGGGT
GGAGTTCATTTTGATCTCGTAAAGCGAGTTTTTCGTGACATTCACGTGTT
GGCCAGAGCCTGAAGAGATAATCATCAATATCTGAACGG
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