FC931293

Overview
NameFC931293
Unique NameFC931293
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRZP (Uridine kinase OS=Streptococcus pneumoniae (strain P1031) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRZJ (Uridine kinase OS=Streptococcus pneumoniae (strain JJA) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRR6 (Uridine kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRPS (Uridine kinase OS=Streptococcus pneumoniae (strain CGSP14) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRPN (Uridine kinase OS=Streptococcus pneumoniae GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRPJ (Uridine kinase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRPI (Uridine kinase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRP7 (Uridine kinase OS=Streptococcus pneumoniae (strain 70585) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRP2 (Uridine kinase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 47/149 (31.54%), Postives = 79/149 (53.02%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P   I++I  D+Y  D S +     +  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L +K LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSHFPDEKISMIEHDSYYKDQSHLTFEERVKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPQDVFIVEGILVLEDKRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
[Close]
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_STRGC (Uridine kinase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=udk PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 48/149 (32.21%), Postives = 80/149 (53.69%), Query Frame = 3 
Query:  291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYAL-SEKLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710
            I++GV G SG GKT  +  +L+  P+  IA+I  D+Y  D S +     I  N+D P   D D ++E I+ L  G+ V +P YD+   +R   +T       + I+EGI  L  ++LR L+D+++ V       +++R+ RD+    R+
Sbjct:    6 IIIGVTGGSGGGKTSVSRAILSNFPNEKIAMIEHDSYYKDQSHLTFEERIKTNYDHPFAFDTDLMIEQIKELLAGRPVDIPTYDYTEHTR-SSKTYRQEPKDVFIVEGILVLEDQRLRDLMDIKIFVDTDDDVRIIRRIKRDMEERGRS 153
The following BLAST results are available for this feature:
BLAST of FC931293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
URK_STRZP7.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae (strain... [more]
URK_STRZJ7.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae (strain... [more]
URK_STRR67.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae (strain... [more]
URK_STRPS7.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae (strain... [more]
URK_STRPN7.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae GN=udk ... [more]
URK_STRPJ7.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae (strain... [more]
URK_STRPI7.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae (strain... [more]
URK_STRP77.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae (strain... [more]
URK_STRP27.511e-1331.54Uridine kinase OS=Streptococcus pneumoniae serotyp... [more]
URK_STRGC7.511e-1332.21Uridine kinase OS=Streptococcus gordonii (strain C... [more]

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Properties
Property NameValue
Genbank descriptionC34103E12EF PostHarvP1 Citrus clementina cDNA clone C34103E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931293 ID=FC931293; Name=FC931293; organism=Citrus clementina; type=EST; length=739bp
GGTTCATCTTGATTCCTAAGAATTCACTGTTCCAAAAAAAGGAAAAAAAA
TCAAAGAAAAGCAAGGGAGGGAATATATATTGTGGAACTTATATGGCTCA
GGACACTTCTTCAGGTGCTGATTCACCTCGACGACGACCTGGTCTGTTGC
GAGATCAGGTTCAGTTGGTTAAGAAGAAGGACTCTGATCGCTATGAGATT
GTTCCTATAGAAGATACATTGTCATTTGAAAAAGGTTTTTTCATAGTAAT
TCGTGCATGCCAATTGTTGGCTCAAAAGAATCATGGGATAATATTAGTTG
GAGTAGCAGGTCCCTCCGGAGCTGGAAAGACTGTCTTCACTGAGAAGGTG
CTCAACTTTATGCCCAGTATTGCTGTGATAACCATGGACAACTACAACGA
TTCTAGTCGTATCATTGATGGCAACTTCGATGACCCGCGCTTGACAGATT
ATGACACACTGCTTGAAAACATTCGTGGTTTAAAGGAAGGGAAAGCTGTT
CAAGTCCCAATTTACGACTTCAAGTCTAGTTCTCGCATTGGTTACAGGAC
ACTTGAAGTCCCTAGCTCCCGCATTGTGATTATTGAAGGCATCTATGCCT
TAAGTGAAAAACTGCGGCCTTTGATAGATCTTCGTGTATCTGTTACGGGT
GGAGTTCATTTTGATCTCGTAAAGCGAGTTTTTCGTGACATTCACGTGTT
GGCCAGAGCCTGAAGAGATAATCATCAATATCTGAACGG
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