FC931293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_CLOPE (Uridine kinase OS=Clostridium perfringens GN=udk PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12 Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737 I +G+ G +G+GK+ +++ IA+I D+Y D S + + N+D P D + L+ ++ L G ++Q P YDF +RI T +V IVI+EGI L + ++R L+D+++ V +++R+ RDI+ R +QYLN Sbjct: 5 IFIGITGGTGSGKSTIAKEIYRQFGEDCIAMIEQDSYYKDQSHLSMEDRVKTNYDHPNAFDNNLLVSHLESLLNGHSIQKPSYDFSIHNRI-EDTTKVEPKEIVIVEGILILEDPRIRELLDIKIYVDTDADVRIIRRMVRDINERGRTMESVINQYLN 162
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_CLOP1 (Uridine kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=udk PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12 Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737 I +G+ G +G+GK+ +++ IA+I D+Y D S + + N+D P D + L+ ++ L G ++Q P YDF +RI T +V IVI+EGI L + ++R L+D+++ V +++R+ RDI+ R +QYLN Sbjct: 5 IFIGITGGTGSGKSTIAKEIYRQFGEDCIAMIEQDSYYKDQSHLSMEDRVKTNYDHPNAFDNNLLVSHLESLLNGHSIQKPSYDFSIHNRI-EDTTKVEPKEIVIVEGILILEDPRIRELLDIKIYVDTDADVRIIRRMVRDINERGRTMESVINQYLN 162
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_ESCF3 (Uridine kinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=udk PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 43/161 (26.71%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 267 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710 + ++H +++G+AG S +GK++ + + I VI D Y D S + + N+D P D+ LLE+++ LK G A+ +P+Y + +R+ T++V +++I+EGI L++ +LR ++ + V + L++R+ RD++ R+ Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRM-KETVKVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS 160
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_CLOPS (Uridine kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=udk PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 49/159 (30.82%), Postives = 83/159 (52.20%), Query Frame = 3 Query: 291 ILVGVAGPSGAGKTVFTEKVLNFMPS--IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA*RD-NHQYLN 737 I +G+ G +G+GK+ +++ IA+I D+Y D S + + N+D P D + L+ ++ L G +Q P YDF +RI T +V IVI+EGI L + ++R L+D+++ V +++R+ RDI+ R +QYLN Sbjct: 5 IFIGITGGTGSGKSTIAKEIYRQFGEECIAMIEQDSYYKDQSHLSMDDRVKTNYDHPNAFDNNLLVSHLESLLNGHCIQKPSYDFSIHNRI-EDTTKVEPKEIVIVEGILILEDPRIRELLDIKIYVDTDADVRIIRRMVRDINERGRTIESVINQYLN 162
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_VIBCH (Uridine kinase OS=Vibrio cholerae GN=udk PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 3 Query: 276 KNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLAR 707 +N+ ++VG+AG S +GK++ + N + + I VIT D Y D S + + N+D P D+D L ++++ L G+AV+VP Y + +R T P +++I+EGI L++ +LR L+ V + + L++RV RD+ R Sbjct: 3 ENNQCVIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDCYYKDQSHLSMEERVKTNYDHPSALDHDLLCQHLQMLARGEAVEVPEYSYTEHTRTEQTTTMTP-KKVIILEGILLLTDPRLRDLMHATVFMDTPLDICLLRRVKRDVQERGR 158
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_ERWT9 (Uridine kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=udk PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 44/161 (27.33%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 267 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFM------PSIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710 +A K+H ++VG+AG S +GK++ + + +I VI D Y D S + + N+D P D+ LL++++ LK G+A+ +P+Y + +R +T+ + +++I+EGI L++ +LR ++ + V + L++R+ RD++ R+ Sbjct: 1 MADKSHQCVIVGIAGASASGKSLIASTLYREVRERVGDENIGVIPEDAYYKDQSHLTMEERVKTNYDHPSAMDHSLLLQHLQMLKAGQAIDLPVYSYVEHTRT-QKTIRLEPKKVIILEGILLLTDARLRQEMNFSIFVDTPLDICLMRRMKRDVNERGRS 160
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_VIBFM (Uridine kinase OS=Vibrio fischeri (strain MJ11) GN=udk PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 47/156 (30.13%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 279 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLAR 707 NH I+VG+AG S +GK++ + N + + I VIT D+Y D S + + N+D P D++ L E++ L G+AV +P Y + +R + P +++I+EGI L++ +LR L+ V + + L++R RD+ R Sbjct: 6 NHHCIIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDSYYKDQSHLTMEERVKTNYDHPNALDHELLCEHLEQLMRGEAVNIPTYSYTEHTRTSEVDVMTP-KKVIILEGILLLTDPRLRNLMHASVFMDTPLDICLLRRARRDVEERGR 160
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_VIBF1 (Uridine kinase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=udk PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 47/156 (30.13%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 279 NHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLAR 707 NH I+VG+AG S +GK++ + N + + I VIT D+Y D S + + N+D P D++ L E++ L G+AV +P Y + +R + P +++I+EGI L++ +LR L+ V + + L++R RD+ R Sbjct: 6 NHHCIIVGIAGASASGKSLIASTIYNELRAKVGDHQIGVITEDSYYKDQSHLTMEERVKTNYDHPNALDHELLCEHLEQLMRGEAVNIPTYSYTEHTRTSEVDVMTP-KKVIILEGILLLTDPRLRNLMHASVFMDTPLDICLLRRARRDVEERGR 160
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_SHIFL (Uridine kinase OS=Shigella flexneri GN=udk PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 43/161 (26.71%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 267 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMD-NYNDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710 + ++H +++G+AG S +GK++ + + I VI D Y D S + + N+D P D+ LLE+++ LK G A+ +P+Y + +R+ T+ V +++I+EGI L++ +LR ++ + V + L++R+ RD++ R+ Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRM-KETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS 160
BLAST of FC931293 vs. ExPASy Swiss-Prot
Match: URK_SALTY (Uridine kinase OS=Salmonella typhimurium GN=udk PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12 Identity = 41/161 (25.47%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 267 LAQKNHGIILVGVAGPSGAGKTVFTEKVLNFMPS------IAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSE-KLRPLIDLRVSVTGGVHFDLVKRVFRDIHVLARA 710 + ++H +++G+AG S +GK++ + + I VI D+Y D S + + N+D P D+ L ++++ LK G A+++P+Y + +R+ T+ V +++I+EGI L++ +LR ++ + V + L++R+ RD++ R+ Sbjct: 1 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEERVKTNYDHPNAMDHSLLFQHLQALKRGSAIELPVYSYVEHTRM-QETVRVEPKKVIILEGILLLTDARLREEMNFSIFVDTPLDICLMRRIKRDVNERGRS 160 The following BLAST results are available for this feature:
BLAST of FC931293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 167
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931293 ID=FC931293; Name=FC931293; organism=Citrus clementina; type=EST; length=739bpback to top |