FC931302

Overview
NameFC931302
Unique NameFC931302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_METBU (Adenylate kinase OS=Methanococcoides burtonii (strain DSM 6242) GN=adk PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.326e-35
Identity = 78/169 (46.15%), Postives = 105/169 (62.13%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M ++L GPPGAGKGTQA  L + Y   H++TGD+LR+ V   T LGKEAK  MD+G LV DE+++ +IK+ L   S+CK G++LDG+PRT  QA+ L  +LV     L+  + + + D  LV R+ GR V    G SYH  FNPPK +   D  G  L QR DD  + +
Sbjct:    1 MNVVLFGPPGAGKGTQAKELDKHYQIPHISTGDILRANVRDGTKLGKEAKGYMDKGELVPDEVLIGVIKNRL-AESDCKPGYLLDGYPRTTPQADALSSILVEIGMPLEVVLNIDVADEELVTRLCGRYV-CTCGESYHMKFNPPKKENVCDACGADLYQRDDDKEDVI 167          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_GEOKA (Adenylate kinase OS=Geobacillus kaustophilus GN=adk PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.326e-35
Identity = 73/171 (42.69%), Postives = 110/171 (64.33%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETLTS 684
            M ++LMG PGAGKGTQA  + E Y   H++TGDM R+ + + T LG +AK+ MD+G LV DE+ + +++  L +  +C++GF+LDGFPRTVAQAE L+ +L    +KL + + + +   +L+ R+TGR +    G +YH +F+PP      D  G  L QR DDN  T+ +
Sbjct:    1 MNLVLMGLPGAGKGTQAGKIVEAYGIPHISTGDMFRAAIKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERL-SKEDCQHGFLLDGFPRTVAQAEALETLLSEIGRKLDYVIHIDVRQEVLMERLTGRRICRNCGATYHLVFHPPAKPGVCDKCGGDLYQRPDDNEATVAN 170          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_AGRVS (Adenylate kinase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=adk PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.326e-35
Identity = 76/170 (44.71%), Postives = 110/170 (64.71%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVD-MKDDISGEPLIQRSDDNAETL 678
            MR+IL+GPPGAGKGTQA  + +KY    L+TGDMLR+ V+ +T++GK AK +MD G LVSD+I++ ++   +D + +C NGFILDGFPRT+ QA+  + ML  +  +L   VE++++D +L  RI GR      G  YH     PKV+ + D        +R DDN +T+
Sbjct:    1 MRLILLGPPGAGKGTQAQRIVDKYGIPQLSTGDMLRAAVSAQTEVGKRAKAVMDAGKLVSDDIVIAIVSERIDQD-DCSNGFILDGFPRTLIQADATEKMLAVKGLELSAVVEIRVEDEILADRIAGRYTCANCGTGYHDENLKPKVEGVCDKCGSTHFKRRPDDNRDTV 169          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_STRGG (Adenylate kinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=adk PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.840e-35
Identity = 80/186 (43.01%), Postives = 112/186 (60.22%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLV-HPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL-TSVWLLTRPDHPVVD 723
            MRI+L+GPPGAGKGTQA  L +     H+ATGD+ R+ +++ TDLGK+A+  MD G LV DE+ + M K  +   ++   GF+LDGFPR V QAE LD ML     KL   ++L++ +  +V RI GR V    S   +H  +NPPK +   D  G  L QR DD+ ET+ T + +      P++D
Sbjct:    1 MRIVLVGPPGAGKGTQAAYLAQNLSIPHIATGDLFRANISQGTDLGKQARAYMDAGQLVPDEVTIGMAKDRM-AQADAAGGFLLDGFPRNVGQAEALDVMLKDEGVKLDAVLDLEVPEDEVVKRIAGRRVCRNNSAHVFHLTYNPPKAEGVCDACGGELYQRDDDSEETVRTRLEVYHTQTEPIID 185          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_STRAW (Adenylate kinase OS=Streptomyces avermitilis GN=adk PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.840e-35
Identity = 75/170 (44.12%), Postives = 109/170 (64.12%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITG-RLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRI+L+GPPGAGKGTQA  L +     H++TGD+ R+ ++++T+LGK AK  MD+G LV DE+ + M K  ++   +  NGF+LDGFPR V QAE LD+ML +   KL   ++L++ +  +V RI G R+    S   +H  + PPK +   D+ G  L QR DD+ ET+
Sbjct:    1 MRIVLVGPPGAGKGTQAAFLAKNLGIPHISTGDLFRANISQQTELGKLAKSYMDEGNLVPDEVTIAMAKDRME-QPDAVNGFLLDGFPRNVKQAEALDEMLKSEGMKLDAVLDLEVPEDEVVKRIAGRRICRNDSAHVFHVSYKPPKQEGVCDVCGGELYQRDDDSEETV 169          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_NITOC (Adenylate kinase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=adk PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.840e-35
Identity = 76/172 (44.19%), Postives = 113/172 (65.70%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMK-DDISGEPLIQRSDDNAETLTS 684
            MR +L+G PG+GKGTQ   L ++Y    ++TGD+LR+ VA  ++LGK+AK  MD G LVSD+I++ +I+  L      K G+ILDGFPR   QA+ LD+ML    + LQ  + L ++  +L+ R+TGR    A G  Y+  F+PP+VD + D  + + L+QRSDDN ET+++
Sbjct:    1 MRAVLLGAPGSGKGTQGERLSQQYGIPQVSTGDLLRAAVAAGSELGKQAKAAMDAGELVSDQIVIGIIRERLTQPDAAK-GYILDGFPRNFTQAQALDEMLATLERPLQAIILLDVNFEVLMRRLTGRRTCQACGAIYNIYFSPPEVDHRCDKCNSDQLVQRSDDNEETISN 171          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_ENTFA (Adenylate kinase OS=Enterococcus faecalis GN=adk PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.840e-35
Identity = 75/170 (44.12%), Postives = 107/170 (62.94%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVD-MKDDISGEPLIQRSDDNAETL 678
            M +ILMG PGAGKGTQA  + + Y   H++TGDM R+ +  +T LG EAK  +D+G LV DE+   ++K  L      K GF+LDGFPRT+ QA+ LD ML   N+K+   +++ +++ +L+ R+ GR +    G +YHK+FNPPKV+   D   G    QR DD  ET+
Sbjct:    1 MNLILMGLPGAGKGTQAEKIIDTYGIPHISTGDMFRAAMKNETALGLEAKSYIDKGELVPDEVTNGIVKERLAEPDTDK-GFLLDGFPRTLDQAKALDTMLKELNKKIDAVIDIHVEEDVLIERLAGRFICRTCGATYHKLFNPPKVEGTCDRCGGHEFYQREDDKPETV 169          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_SYNWW (Adenylate kinase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=adk PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.155e-34
Identity = 75/169 (44.38%), Postives = 107/169 (63.31%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M IILMGPPGAGKGTQA  LK ++   H++TGD+ R  V + ++LG+EA+K M  G LV DEI   ++K  +   ++C +GF+LDGFPRT  QA+ LD  L    +K+  A+ + +   LL+ R++GR+      R Y+  FNPP+   K D  G  L+QR+DD  ET+
Sbjct:    1 MNIILMGPPGAGKGTQAELLKARFPIPHISTGDIFRDAVNQGSELGQEAQKYMSSGQLVPDEITTAIVKERI-TQADCDSGFLLDGFPRTTDQAQALDQSLAELGKKVDLAINIDVPTQLLIERLSGRISCRECKRVYNLNFNPPREQGKCDSCGGELVQRNDDRGETV 168          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_GEOLS (Adenylate kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=adk PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.155e-34
Identity = 75/169 (44.38%), Postives = 109/169 (64.50%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M +IL GPPGAGKGTQA  L E Y    ++TGDMLR+ V   T LG +A++IM QGGLVSD+I++ ++   L  + +C  GF+LDGFPRT+ QA+ L  +L    + + H + L++D   +V R++GR    + G+ YH +F+PP      D+ G  L+QR+DD  ET+
Sbjct:    1 MNLILFGPPGAGKGTQAQFLVETYGIPQISTGDMLRAAVKAGTPLGVKAQEIMIQGGLVSDDIVLGIVAERLAQD-DCAAGFVLDGFPRTIPQADALSVILKQVGRAIDHVISLEVDGEEIVNRLSGRRSCSSCGKGYHLVFDPPLRAGVCDVCGSGLVQRADDQEETV 168          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_STRPG (Adenylate kinase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=adk PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.969e-34
Identity = 70/169 (41.42%), Postives = 110/169 (65.09%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M +++MG PGAGKGTQA  + E++   H++TGDM R+ +A +T++G+ AK  +D+G LV DE+   ++K  L  +   + GF+LDG+PRT+ QA  LD  L     +L   + +++D S LV R++GR+++  +G ++HK+FNPP VD K+    E   QR DD  ET+
Sbjct:    1 MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLVERLSGRIINRKTGETFHKVFNPP-VDYKE----EDYYQREDDKPETV 164          
The following BLAST results are available for this feature:
BLAST of FC931302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_METBU2.326e-3546.15Adenylate kinase OS=Methanococcoides burtonii (str... [more]
KAD_GEOKA2.326e-3542.69Adenylate kinase OS=Geobacillus kaustophilus GN=ad... [more]
KAD_AGRVS2.326e-3544.71Adenylate kinase OS=Agrobacterium vitis (strain S4... [more]
KAD_STRGG8.840e-3543.01Adenylate kinase OS=Streptomyces griseus subsp. gr... [more]
KAD_STRAW8.840e-3544.12Adenylate kinase OS=Streptomyces avermitilis GN=ad... [more]
KAD_NITOC8.840e-3544.19Adenylate kinase OS=Nitrosococcus oceani (strain A... [more]
KAD_ENTFA8.840e-3544.12Adenylate kinase OS=Enterococcus faecalis GN=adk P... [more]
KAD_SYNWW1.155e-3444.38Adenylate kinase OS=Syntrophomonas wolfei subsp. w... [more]
KAD_GEOLS1.155e-3444.38Adenylate kinase OS=Geobacter lovleyi (strain ATCC... [more]
KAD_STRPG1.969e-3441.42Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34103F09EF PostHarvP1 Citrus clementina cDNA clone C34103F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931302 ID=FC931302; Name=FC931302; organism=Citrus clementina; type=EST; length=725bp
GGTCTACAGTCTTTTGCTTCCACCTCTTCCCTCCTACAGTTCACAATGGC
TCCCATCACTGAAGAGGCTGTCTCCGGTCTGAAGAACGCCATCCACCAGC
TGGAGGCAAAGGTGTCCGAGCTTGAGAGCCGTCTTGCCAATGGCGGCAAG
CCCAAGTCCGCTGCCGAGCAGATGCGCATCATCCTGATGGGCCCTCCTGG
TGCAGGCAAGGGTACTCAAGCCCCGAACCTTAAGGAAAAGTACTGCGCAT
GCCACCTGGCCACCGGTGACATGCTGCGGTCTCAGGTCGCGAAGAAGACC
GATCTTGGAAAGGAAGCCAAGAAGATCATGGACCAGGGTGGTCTCGTTAG
CGATGAGATCATGGTCAACATGATCAAGAGCGAGCTCGACAACAACTCAG
AGTGCAAGAACGGTTTCATTCTGGATGGTTTCCCCCGGACGGTTGCGCAG
GCCGAGCGTCTCGATGACATGCTCGTCGCTCGTAATCAGAAGCTCCAGCA
CGCCGTTGAGCTGCAGATTGACGACTCTCTGCTGGTGGCTCGTATCACCG
GCCGCCTGGTCCACCCTGCCTCTGGCCGCTCGTACCACAAGATCTTCAAC
CCGCCCAAGGTTGACATGAAGGACGACATCTCCGGAGAGCCGCTGATCCA
GCGTTCCGATGACAATGCCGAAACCCTCACCAGCGTCTGGCTACTTACAC
GCCCAGACCACCCTGTCGTCGACTA
back to top