FC931302

Overview
NameFC931302
Unique NameFC931302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BDEBA (Adenylate kinase OS=Bdellovibrio bacteriovorus GN=adk PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.714e-33
Identity = 74/169 (43.79%), Postives = 109/169 (64.50%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M +IL G PGAGKGTQ+  L ++     ++TGD+ R+ +  +TDLGK+A++ MD+G LV D I++ M++  L    +    FILDGFPRTVAQA+ LD++LV  N  +  A+ L++   +L+ R+TGR V    G  YH +  P KV+ K D+ G  +IQR+DD AE +
Sbjct:    1 MNLILFGAPGAGKGTQSELLIKRQGMTQISTGDLFRAAIKGQTDLGKKAQEFMDKGQLVPDSIVIGMVEEVLQKGVQ---NFILDGFPRTVAQAQALDELLVKMNLSIGKAIFLEVPMRILMDRLTGRRVCKNCGAVYHIVSKPSKVEGKCDLCGGEVIQRNDDKAEVI 166          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_STRCO (Adenylate kinase OS=Streptomyces coelicolor GN=adk PE=3 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 4.851e-33
Identity = 73/170 (42.94%), Postives = 106/170 (62.35%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLV-HPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRI+L+GPPGAGKGTQA  L E     H++TGD+ R+ ++++T+LGK AK  M+ G LV DE+ + M K  ++   + + GF+LDGFPR V+QAE LD++L     KL   ++L+  +  +V RI GR V        +H  + PPK +   D+ G  L QR DD+ ET+
Sbjct:    1 MRIVLVGPPGAGKGTQATRLAETLHIPHISTGDLFRANISQQTELGKLAKSYMNAGNLVPDEVTIAMAKDRME-QPDAEGGFLLDGFPRNVSQAEALDELLETEGMKLDAVLDLEAPEDEVVKRIAGRRVCRNEPKHVFHVTYTPPKKEGVCDVCGGELYQRDDDSEETV 169          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_LACLA (Adenylate kinase OS=Lactococcus lactis subsp. lactis GN=adk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.335e-33
Identity = 73/170 (42.94%), Postives = 107/170 (62.94%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISG-EPLIQRSDDNAETL 678
            M +++MG PGAGKGTQA  + + Y   H++TGDM R+ +  +T++GK AK  +D+G LV DE+   ++K  L  +    +GF+LDG+PRT+ QA  LD ML     KL   V + ++  +LV R++GR +    G +YHKIFNP KV+   D+ G   L QR+DD  ET+
Sbjct:    1 MNLLIMGLPGAGKGTQAEFIVKNYGVNHISTGDMFRAAMKNETEMGKLAKSFIDKGELVPDEVTNGIVKERLAQDDIKASGFLLDGYPRTIDQAHALDTMLEELGIKLDAVVNIVVNPDILVDRLSGRYICRNCGATYHKIFNPTKVEGVCDVCGSHDLYQRADDVPETV 170          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BUCCC (Adenylate kinase OS=Buchnera aphidicola subsp. Cinara cedri GN=adk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.335e-33
Identity = 70/169 (41.42%), Postives = 110/169 (65.09%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRII++GPPG+GKGTQ   L + +    ++TG++LR ++ K     K  KK +++G L+ +  ++ +I+  +    +  NGFILDGFPR + QA+ L   +      +++ + L+I    ++ RITGRL+H +SGR+YHKIFNPPK+  KDDI+ E L  R+DDN +T+
Sbjct:    1 MRIIMIGPPGSGKGTQTQLLSKYFHIPCISTGEILRKEIKKNKKTKKYIKKTINKGKLIKNSFIIKIIEKNI-KKKKFFNGFILDGFPRNIEQAKSLSKKI-----NIEYIIYLKIKYDDIIKRITGRLIHASSGRTYHKIFNPPKIKNKDDITQEKLCSRNDDNEKTI 163          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_GEOSM (Adenylate kinase OS=Geobacter sp. (strain M21) GN=adk PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.411e-32
Identity = 72/169 (42.60%), Postives = 101/169 (59.76%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M +IL+GPPG GKGTQA  L +++    ++TGD+LR+ V + T +G +AK  MD G LV DE+++ +++  L    +C+ GFILDGFPRTV QA+ L  +L    + + H V L +D   L+ R+TGR      G  YH  F P KV    D     L+QR DD  ET+
Sbjct:    1 MNLILLGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVPDEVVIGIVEERLAQE-DCQKGFILDGFPRTVPQADALGQVLSGMGKSIDHVVSLSVDKEELLTRLTGRRACANCGAGYHVDFAPSKVAGVCDACSGQLVQREDDKEETI 168          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_GEOBB (Adenylate kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=adk PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.411e-32
Identity = 72/169 (42.60%), Postives = 102/169 (60.36%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M +IL+GPPG GKGTQA  L +++    ++TGD+LR+ V + T +G +AK  MD G LV DE+++ +++  L   ++C+ GFILDGFPRTV QA+ L  +L    + + H V L +D   L+ R+TGR      G  YH  F P KV    D     L+QR DD  ET+
Sbjct:    1 MNLILLGPPGVGKGTQAKLLIDRFGIPQISTGDILRAAVKELTPMGAKAKGYMDSGALVPDEVVIGIVEERLAQ-ADCQKGFILDGFPRTVPQADALGQVLSGMGKSIDHVVSLSVDKGELLKRLTGRRACANCGAGYHVDFAPSKVAGVCDACSGQLVQREDDKEETI 168          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_XANP2 (Adenylate kinase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=adk PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.843e-32
Identity = 75/145 (51.72%), Postives = 97/145 (66.90%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVH-PASGRSYHKIFNP 603
            MR++L+GPPGAGKGTQA  L  ++    L+TGDMLR+ VA  T +G +AK +MD GGLVSDEI++ +I   LD + + KNGFILDGFPRTVAQAE LD +L ++  KL   +EL +D   LV RI  R     A G +  K  +P
Sbjct:    1 MRLVLLGPPGAGKGTQAQRLVARHGIVQLSTGDMLRAAVAAGTPVGLKAKAVMDAGGLVSDEIVIGIIAERLD-SPDAKNGFILDGFPRTVAQAEALDQLLASKGLKLDAVIELVVDQEKLVNRILNRAAEAQAKGEAVRKDDDP 144          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_STRMK (Adenylate kinase OS=Stenotrophomonas maltophilia (strain K279a) GN=adk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.407e-32
Identity = 76/174 (43.68%), Postives = 105/174 (60.34%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVH-------PASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAE 672
            MR++L+GPPG+GKGTQA  LKEK    H++TGDMLR+++A  T+LGK+AK +MD G LVSD+I++ M++S L      K GFILDG+PR VAQA  +D +L    Q L   V+L +   LLV RI GR          P + R   +++N     + D  +G   + R D   E
Sbjct:    1 MRLVLLGPPGSGKGTQATRLKEKLEIAHISTGDMLRAEIAAGTELGKQAKTVMDAGNLVSDDILLGMLESRLTQPDVAK-GFILDGYPRNVAQANAMDGLLAKIGQPLDAVVQLDVATELLVERIAGRAKEQGRADDTPEAVRQRLQVYNDQTAPVVDFYAGRGTLARVDGVGE 173          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_STRLI (Adenylate kinase (Fragment) OS=Streptomyces lividans GN=adk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.407e-32
Identity = 74/170 (43.53%), Postives = 106/170 (62.35%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLV-HPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRI+L+GPPGAGKGTQA  L E     H++TGD+ R+ ++++T+LGK AK  MD G LV DE+ + M ++    +S     F+LDGFPR V+QAE LD++L   + KL   ++L+  +  +V RI GR V    S   +H  + PPK +   D+ G  L QR DD+ ET+
Sbjct:    1 MRIVLVGPPGAGKGTQATRLAETLHIPHISTGDLFRANISQQTELGKLAKSYMDAGNLVPDEVTIAMDRTAW--SSPTPRAFLLDGFPRNVSQAEALDELLETEDMKLDAVLDLEAPEDEVVKRIAGRRVCRNDSAHVFHVTYTPPKKEGVCDVCGGELYQRDDDSEETV 168          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_ACHLI (Adenylate kinase OS=Acholeplasma laidlawii (strain PG-8A) GN=adk PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.407e-32
Identity = 75/168 (44.64%), Postives = 100/168 (59.52%), Query Frame = 1
Query:  175 RIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            R+I +GPPGAGKG+QA  + +     H++TGDM R+ +   T LG EAKK  DQG LV D++   M+K  L +  + + GFI DG+PRT  QA  LD++L+  NQKL   + +   D ++V RITGR   P  G  YH    PPKV    D  G  L+QR DD  ET+
Sbjct:    4 RMIFVGPPGAGKGSQAKIISQTLNIPHISTGDMFRTHIKGSTPLGLEAKKYTDQGLLVPDDVTNQMVKDRL-SQKDVEKGFIFDGYPRTPDQAIFLDNLLMVTNQKLDVVLNISSSDEVIVKRITGRRTCPVCGAIYHVDNYPPKVAGICDNDGATLVQRKDDQKETI 170          
The following BLAST results are available for this feature:
BLAST of FC931302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_BDEBA3.714e-3343.79Adenylate kinase OS=Bdellovibrio bacteriovorus GN=... [more]
KAD_STRCO4.851e-3342.94Adenylate kinase OS=Streptomyces coelicolor GN=adk... [more]
KAD_LACLA6.335e-3342.94Adenylate kinase OS=Lactococcus lactis subsp. lact... [more]
KAD_BUCCC6.335e-3341.42Adenylate kinase OS=Buchnera aphidicola subsp. Cin... [more]
KAD_GEOSM1.411e-3242.60Adenylate kinase OS=Geobacter sp. (strain M21) GN=... [more]
KAD_GEOBB1.411e-3242.60Adenylate kinase OS=Geobacter bemidjiensis (strain... [more]
KAD_XANP21.843e-3251.72Adenylate kinase OS=Xanthobacter autotrophicus (st... [more]
KAD_STRMK2.407e-3243.68Adenylate kinase OS=Stenotrophomonas maltophilia (... [more]
KAD_STRLI2.407e-3243.53Adenylate kinase (Fragment) OS=Streptomyces livida... [more]
KAD_ACHLI2.407e-3244.64Adenylate kinase OS=Acholeplasma laidlawii (strain... [more]

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Properties
Property NameValue
Genbank descriptionC34103F09EF PostHarvP1 Citrus clementina cDNA clone C34103F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931302 ID=FC931302; Name=FC931302; organism=Citrus clementina; type=EST; length=725bp
GGTCTACAGTCTTTTGCTTCCACCTCTTCCCTCCTACAGTTCACAATGGC
TCCCATCACTGAAGAGGCTGTCTCCGGTCTGAAGAACGCCATCCACCAGC
TGGAGGCAAAGGTGTCCGAGCTTGAGAGCCGTCTTGCCAATGGCGGCAAG
CCCAAGTCCGCTGCCGAGCAGATGCGCATCATCCTGATGGGCCCTCCTGG
TGCAGGCAAGGGTACTCAAGCCCCGAACCTTAAGGAAAAGTACTGCGCAT
GCCACCTGGCCACCGGTGACATGCTGCGGTCTCAGGTCGCGAAGAAGACC
GATCTTGGAAAGGAAGCCAAGAAGATCATGGACCAGGGTGGTCTCGTTAG
CGATGAGATCATGGTCAACATGATCAAGAGCGAGCTCGACAACAACTCAG
AGTGCAAGAACGGTTTCATTCTGGATGGTTTCCCCCGGACGGTTGCGCAG
GCCGAGCGTCTCGATGACATGCTCGTCGCTCGTAATCAGAAGCTCCAGCA
CGCCGTTGAGCTGCAGATTGACGACTCTCTGCTGGTGGCTCGTATCACCG
GCCGCCTGGTCCACCCTGCCTCTGGCCGCTCGTACCACAAGATCTTCAAC
CCGCCCAAGGTTGACATGAAGGACGACATCTCCGGAGAGCCGCTGATCCA
GCGTTCCGATGACAATGCCGAAACCCTCACCAGCGTCTGGCTACTTACAC
GCCCAGACCACCCTGTCGTCGACTA
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