FC931302

Overview
NameFC931302
Unique NameFC931302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PSEMY (Adenylate kinase OS=Pseudomonas mendocina (strain ymp) GN=adk PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.996e-46
Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + EK+    ++TGDMLR+ V   T+LG +AK +MD GGLVSD++++N++K  +    +C NGF+ DGFPRT+ QAE L D  V     L H VE+ +DD  +V R++GR VHPASGR YH  +NPPKV  KDD+SGE L+QR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQARYITEKFGIPQISTGDMLRAAVKAGTELGLKAKSVMDAGGLVSDDLIINLVKERI-AQPDCANGFLFDGFPRTIPQAEALRDAGVT----LDHVVEIAVDDEEIVKRLSGRRVHPASGRVYHTEYNPPKVAGKDDVSGEELVQREDDKEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BACHD (Adenylate kinase OS=Bacillus halodurans GN=adk PE=3 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.480e-45
Identity = 87/169 (51.48%), Postives = 121/169 (71.60%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            M +ILMG PGAGKGTQA  + EKY   H++TGDM R+ +  +T+LG +AK  MD G LV DE+ + +++  L  + +C+NGF+LDGFPRTVAQAE L+D+L + ++KL + + + + + LL+ R+TGR V P SGR+YH IFNPPKV+   D+ G  LIQR DD  ET+
Sbjct:    1 MNLILMGLPGAGKGTQAEKIIEKYGIPHISTGDMFRAAMKNETELGLKAKSYMDAGELVPDEVTIGIVRDRLSQD-DCQNGFLLDGFPRTVAQAEALEDILASLDKKLDYVINIDVPEQLLMDRLTGRRVSPTSGRTYHVIFNPPKVEGICDVDGSELIQRDDDKPETV 168          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PSEF5 (Adenylate kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=adk PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.230e-45
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + EK+    ++TGDMLR+ V   T+LG +AK +MD GGLVSD++++N++K  + + ++C NGF+ DGFPRT+ QAE     LV    +L + VE+ +DD  +V RI GR VH ASGR YH ++NPPK+  KDDI+GE L+QR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQAKFITEKFGIPQISTGDMLRAAVKAGTELGLKAKSVMDSGGLVSDDLIINLVKERI-SQADCVNGFLFDGFPRTIPQAE----ALVKAGVELDNVVEIAVDDEEIVQRIAGRRVHEASGRVYHTVYNPPKIAGKDDITGEDLVQRKDDTEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_VESOH (Adenylate kinase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=adk PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45
Identity = 92/171 (53.80%), Postives = 120/171 (70.18%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETLTS 684
            M IIL+GPPGAGKGTQA N+  KY    ++TGDMLR  V   T LG EAKKIMD GGLVSD I++N++K  +  +S+CKNGF+ DGFPRT+ QAE L    V    K+   +E+Q+ D  ++AR++GR  H  SGR+YH  +N PKV+  DDI+GE L+QRSDD+  T+ S
Sbjct:    1 MNIILLGPPGAGKGTQATNICNKYSIPQISTGDMLRVAVKVGTPLGIEAKKIMDSGGLVSDNIIINLVKERI-QHSDCKNGFLFDGFPRTITQAEALRKDSV----KINFVIEIQVPDQEIIARMSGRRTHLKSGRTYHITYNQPKVEGIDDITGEKLVQRSDDSENTVRS 166          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_HERAR (Adenylate kinase OS=Herminiimonas arsenicoxydans GN=adk PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45
Identity = 89/169 (52.66%), Postives = 122/169 (72.19%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  +K+KY    ++TGDMLR+ V   T LG  AKKIMD+GGLVSD+I++ ++K  L  + +C NG++ DGFPRT+ QA+ + D  VA    + + +E+ + D  +V R++GR VHPASGR+YH  FNPPKV  +DD++GE LIQR DD  ET+
Sbjct:    1 MRLILLGAPGAGKGTQAGFIKDKYNIPQISTGDMLRAAVKAGTPLGIAAKKIMDEGGLVSDDIIIGLVKDRL-KDGDCANGYLFDGFPRTIPQADAMKDAGVA----IDYVLEIDVPDEAIVERMSGRRVHPASGRTYHVKFNPPKVAGRDDVTGEELIQRDDDKEETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BORPD (Adenylate kinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=adk PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.215e-45
Identity = 89/185 (48.11%), Postives = 130/185 (70.27%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETLTS-VWLLTRPDHPVVD 723
            MR+IL+GPPGAGKGTQA  + + +    ++TGDMLR+ V + T LG+EAKK+MD GGLVSDEI++ +++  L    +C NG++ DGFPRT+ QA+ L    VA    L + VE+++ +  ++ R++GR VHPASGRSYH  FNPPK +  DD++GEPL+QR DD  +T+ + + +  +   P+VD
Sbjct:    1 MRLILLGPPGAGKGTQAAFVTQHFAIPQISTGDMLRAAVKQGTPLGQEAKKVMDAGGLVSDEIIIGLVQDRL-KQPDCANGYLFDGFPRTIPQADALKSAGVA----LDYVVEIEVPEDDIIERMSGRRVHPASGRSYHVRFNPPKQEGLDDVTGEPLVQRDDDREDTVRNRLAVYQKQTRPLVD 180          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BORBR (Adenylate kinase OS=Bordetella bronchiseptica GN=adk PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.215e-45
Identity = 87/169 (51.48%), Postives = 121/169 (71.60%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+GPPGAGKGTQA  L + Y    ++TGDMLR+ V   T LG EAKK+MD GGLVSD++++ +++  L    +C NG++ DGFPRT+ QA+ L    +A    L + VE+++ +S ++ R++GR VHPASGRSYH  FNPPK +  DD++GEPL+QR DD  ET+
Sbjct:    1 MRLILLGPPGAGKGTQAAFLTQHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGGLVSDDLIIGLVRDRL-TQPDCANGYLFDGFPRTIPQADALKSAGIA----LDYVVEIEVPESDIIERMSGRRVHPASGRSYHVRFNPPKAEGVDDVTGEPLVQRDDDREETV 164          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BACGO (Adenylate kinase OS=Bacillus globisporus PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.423e-45
Identity = 85/171 (49.71%), Postives = 120/171 (70.18%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETLTS 684
            M I+LMG PGAGKGTQA  + EKY   H++TGDM R+ + + T+LG +AK  MDQG LV DE+ + +++  L + S+C NGF+LDGFPRTV QAE LD +L    +K++H + +Q++   L+AR+TGR +    G SYH +FNPP+V+ K D  G  L QR+DDN +T+T+
Sbjct:    1 MNIVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPDEVTIGIVRERL-SKSDCDNGFLLDGFPRTVPQAEALDQLLADMGRKIEHVLNIQVEKEELIARLTGRRICKVCGTSYHLLFNPPQVEGKCDKDGGELYQRADDNPDTVTN 170          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_RUTMC (Adenylate kinase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=adk PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.231e-44
Identity = 91/185 (49.19%), Postives = 127/185 (68.65%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETLTS-VWLLTRPDHPVVD 723
            M IIL+GPPGAGKGTQA N+ +KY    ++TGDMLR  V   T LG EAKK+MD GGL+SD+I++ ++K  +  N +CKNGF+ DGFPRT+ QAE L         K+   VE+Q+    ++AR++GR  H  SGR+YH ++NPPKV+  DDI+GE LIQR+DD  +T+ + + +  +   P+VD
Sbjct:    1 MNIILLGPPGAGKGTQATNICQKYSIPQISTGDMLREAVKADTPLGIEAKKVMDVGGLISDDIIIGLVKERIQEN-DCKNGFLFDGFPRTIVQAEALK----TDGVKIDFVVEIQVPYEDIIARMSGRRAHLTSGRTYHIVYNPPKVEGIDDITGEELIQRTDDAEDTVRARLNIYHKQTKPLVD 180          
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PSEFS (Adenylate kinase OS=Pseudomonas fluorescens (strain SBW25) GN=adk PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.231e-44
Identity = 87/169 (51.48%), Postives = 120/169 (71.01%), Query Frame = 1
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + EK+    ++TGDMLR+ V   T+LG  AK +MD GGLVSD++++N++K  + +  +CKNGF+ DGFPRT+ QAE     LV    +L   VE+ ++D  +V RI GR VH ASGR YH ++NPPKV+ KDD++G+ L+QR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQAKFITEKFGIPQISTGDMLRAAVKAGTELGLIAKSVMDSGGLVSDDLIINLVKERI-SQEDCKNGFLFDGFPRTIPQAE----ALVKAGVELDAVVEIAVEDEEIVQRIAGRRVHEASGRVYHTVYNPPKVEGKDDVTGDDLVQRKDDTEETV 164          
The following BLAST results are available for this feature:
BLAST of FC931302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PSEMY4.996e-4653.85Adenylate kinase OS=Pseudomonas mendocina (strain ... [more]
KAD_BACHD2.480e-4551.48Adenylate kinase OS=Bacillus halodurans GN=adk PE=... [more]
KAD_PSEF54.230e-4552.07Adenylate kinase OS=Pseudomonas fluorescens (strai... [more]
KAD_VESOH5.524e-4553.80Adenylate kinase OS=Vesicomyosocius okutanii subsp... [more]
KAD_HERAR5.524e-4552.66Adenylate kinase OS=Herminiimonas arsenicoxydans G... [more]
KAD_BORPD7.215e-4548.11Adenylate kinase OS=Bordetella petrii (strain ATCC... [more]
KAD_BORBR7.215e-4551.48Adenylate kinase OS=Bordetella bronchiseptica GN=a... [more]
KAD_BACGO9.423e-4549.71Adenylate kinase OS=Bacillus globisporus PE=1 SV=1[more]
KAD_RUTMC1.231e-4449.19Adenylate kinase OS=Ruthia magnifica subsp. Calypt... [more]
KAD_PSEFS1.231e-4451.48Adenylate kinase OS=Pseudomonas fluorescens (strai... [more]

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Properties
Property NameValue
Genbank descriptionC34103F09EF PostHarvP1 Citrus clementina cDNA clone C34103F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931302 ID=FC931302; Name=FC931302; organism=Citrus clementina; type=EST; length=725bp
GGTCTACAGTCTTTTGCTTCCACCTCTTCCCTCCTACAGTTCACAATGGC
TCCCATCACTGAAGAGGCTGTCTCCGGTCTGAAGAACGCCATCCACCAGC
TGGAGGCAAAGGTGTCCGAGCTTGAGAGCCGTCTTGCCAATGGCGGCAAG
CCCAAGTCCGCTGCCGAGCAGATGCGCATCATCCTGATGGGCCCTCCTGG
TGCAGGCAAGGGTACTCAAGCCCCGAACCTTAAGGAAAAGTACTGCGCAT
GCCACCTGGCCACCGGTGACATGCTGCGGTCTCAGGTCGCGAAGAAGACC
GATCTTGGAAAGGAAGCCAAGAAGATCATGGACCAGGGTGGTCTCGTTAG
CGATGAGATCATGGTCAACATGATCAAGAGCGAGCTCGACAACAACTCAG
AGTGCAAGAACGGTTTCATTCTGGATGGTTTCCCCCGGACGGTTGCGCAG
GCCGAGCGTCTCGATGACATGCTCGTCGCTCGTAATCAGAAGCTCCAGCA
CGCCGTTGAGCTGCAGATTGACGACTCTCTGCTGGTGGCTCGTATCACCG
GCCGCCTGGTCCACCCTGCCTCTGGCCGCTCGTACCACAAGATCTTCAAC
CCGCCCAAGGTTGACATGAAGGACGACATCTCCGGAGAGCCGCTGATCCA
GCGTTCCGATGACAATGCCGAAACCCTCACCAGCGTCTGGCTACTTACAC
GCCCAGACCACCCTGTCGTCGACTA
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