FC931302

Overview
NameFC931302
Unique NameFC931302
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_ALCBS (Adenylate kinase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=adk PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.099e-44
Identity = 87/169 (51.48%), Postives = 120/169 (71.01%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  +KE++    ++TGDMLR+ V   T LG EAKK+MD GGLVSD+I++ ++K  +  N +C NGF+ DGFPRT+ QA+     LV +   +   VE+ +DD  ++ R++GR VHPASGR YH  +NPPKV+ KDD +G+ L+QR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQAQFIKEQFNIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGGLVSDDIILGLVKERITEN-DCANGFLFDGFPRTIPQAQ----SLVEQGVDIDFVVEIDVDDEEIIERLSGRRVHPASGRVYHTKYNPPKVEGKDDETGDELVQRDDDQEETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_CHLPB (Adenylate kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=adk PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.742e-44
Identity = 85/169 (50.30%), Postives = 123/169 (72.78%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRIIL+G PGAGKGTQA  +   +    ++TGDMLR+ + + T LG EAKK+MD G LVSDEI++ ++K  L + S+CKNG + DGFPRT+AQA+ L +  +    ++ H +++++DD  ++ R++GR VHPASGR+YH +FNPP  +  DDI+G+PL+QR DD  ET+
Sbjct:    1 MRIILLGAPGAGKGTQAQFISSTFSIPQISTGDMLRAAINEGTPLGLEAKKVMDAGKLVSDEIILGLVKERL-SKSDCKNGCLFDGFPRTIAQADALKNDCI----QIDHVIDIEVDDEEIIKRMSGRRVHPASGRTYHVLFNPPAKEGVDDITGDPLVQREDDCEETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BORPA (Adenylate kinase OS=Bordetella parapertussis GN=adk PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.742e-44
Identity = 86/169 (50.89%), Postives = 121/169 (71.60%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+GPPGAGKGTQA  L + Y    ++TG+MLR+ V   T LG EAKK+MD GGLVSD++++ +++  L    +C NG++ DGFPRT+ QA+ L    +A    L + VE+++ +S ++ R++GR VHPASGRSYH  FNPPK +  DD++GEPL+QR DD  ET+
Sbjct:    1 MRLILLGPPGAGKGTQAAFLTQHYGIPQISTGNMLRAAVKAGTPLGLEAKKVMDAGGLVSDDLIIGLVRDRL-TQPDCANGYLFDGFPRTIPQADALKSAGIA----LDYVVEIEVPESDIIERMSGRRVHPASGRSYHVRFNPPKAEGVDDVTGEPLVQRDDDREETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_AZOSB (Adenylate kinase OS=Azoarcus sp. (strain BH72) GN=adk PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.676e-44
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+GPPGAGKGTQA  +KEK+    ++TGDMLR+ V   T LG EAKK+MD GGLVSDEI++ ++K  L  + +CK G++ DGFPRT+ QA+ + D  V     +   +E+ + DS +V R++GR  H ASGR+YH  +NPPKV+ KDD++GE L+QR DD  ET+
Sbjct:    1 MRLILLGPPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGIEAKKVMDAGGLVSDEIIIGLVKDRLQQD-DCKAGYMFDGFPRTIPQADAMKDAGV----PIDFVLEIDVPDSEIVERMSGRRAHLASGRTYHVKYNPPKVEGKDDVTGEDLVQRDDDKEETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_BORPE (Adenylate kinase OS=Bordetella pertussis GN=adk PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.108e-44
Identity = 86/169 (50.89%), Postives = 120/169 (71.01%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+GPPGAGKGTQA  L + Y    ++TGDMLR+ V   T LG EAKK+MD GGLVSD++++ +++  L    +C NG++ DGFPRT+ QA+ L    +A    L + VE+++ +S ++ R++ R VHPASGRSYH  FNPPK +  DD++GEPL+QR DD  ET+
Sbjct:    1 MRLILLGPPGAGKGTQAAFLTQHYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGGLVSDDLIIGLVRDRL-TQPDCANGYLFDGFPRTIPQADALKSAGIA----LDYVVEIEVPESDIIERMSERRVHPASGRSYHVRFNPPKAEGVDDVTGEPLVQRDDDREETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_HAHCH (Adenylate kinase OS=Hahella chejuensis (strain KCTC 2396) GN=adk PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.977e-44
Identity = 86/169 (50.89%), Postives = 120/169 (71.01%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MRIIL+G PGAGKGTQA N+ +K+    ++TGDMLR+ V   + LG + K++M  GGLVSDE ++ ++K  +  + +C NGF+ DGFPRT+ QAE L +  V    K+ H VE+ +DD  ++ R++GR VH ASGR YH  +NPPKV+ KDD++GEPL+QR DD  ET+
Sbjct:    1 MRIILLGAPGAGKGTQAQNIMKKFGIPQISTGDMLRAAVKAGSPLGLKVKEVMATGGLVSDETIIALVKDRIKED-DCANGFLFDGFPRTIPQAEALREAGV----KIDHVVEIAVDDQEIIKRLSGRRVHEASGRVYHVDYNPPKVEGKDDVTGEPLVQREDDKEETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PSEAE (Adenylate kinase OS=Pseudomonas aeruginosa GN=adk PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.042e-43
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + EK+    ++TGDMLR+ V   + LG++ K +MD GGLVSD+I++ +IK  +   ++C  GF+ DGFPRT+ QAE L D  V     + H VE+ +DD  +V+RI GR VHPASGR YH   NPPKV  KDD++GE LIQR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERI-TEADCAKGFLFDGFPRTIPQAEALKDAGVT----IDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PSEAB (Adenylate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=adk PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.042e-43
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + EK+    ++TGDMLR+ V   + LG++ K +MD GGLVSD+I++ +IK  +   ++C  GF+ DGFPRT+ QAE L D  V     + H VE+ +DD  +V+RI GR VHPASGR YH   NPPKV  KDD++GE LIQR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERI-TEADCAKGFLFDGFPRTIPQAEALKDAGVT----IDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PSEA8 (Adenylate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=adk PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.042e-43
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + EK+    ++TGDMLR+ V   + LG++ K +MD GGLVSD+I++ +IK  +   ++C  GF+ DGFPRT+ QAE L D  V     + H VE+ +DD  +V+RI GR VHPASGR YH   NPPKV  KDD++GE LIQR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERI-TEADCAKGFLFDGFPRTIPQAEALKDAGVT----IDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETV 164
[Close]
BLAST of FC931302 vs. ExPASy Swiss-Prot
Match: KAD_PSEA7 (Adenylate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=adk PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.042e-43
Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 1 
Query:  172 MRIILMGPPGAGKGTQAPNLKEKYCACHLATGDMLRSQVAKKTDLGKEAKKIMDQGGLVSDEIMVNMIKSELDNNSECKNGFILDGFPRTVAQAERLDDMLVARNQKLQHAVELQIDDSLLVARITGRLVHPASGRSYHKIFNPPKVDMKDDISGEPLIQRSDDNAETL 678
            MR+IL+G PGAGKGTQA  + EK+    ++TGDMLR+ V   + LG++ K +MD GGLVSD+I++ +IK  +   ++C  GF+ DGFPRT+ QAE L D  V     + H VE+ +DD  +V+RI GR VHPASGR YH   NPPKV  KDD++GE LIQR DD  ET+
Sbjct:    1 MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERI-TEADCAKGFLFDGFPRTIPQAEALKDAGVT----IDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEDLIQREDDKEETV 164
The following BLAST results are available for this feature:
BLAST of FC931302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_ALCBS2.099e-4451.48Adenylate kinase OS=Alcanivorax borkumensis (strai... [more]
KAD_CHLPB2.742e-4450.30Adenylate kinase OS=Chlorobium phaeobacteroides (s... [more]
KAD_BORPA2.742e-4450.89Adenylate kinase OS=Bordetella parapertussis GN=ad... [more]
KAD_AZOSB4.676e-4452.07Adenylate kinase OS=Azoarcus sp. (strain BH72) GN=... [more]
KAD_BORPE6.108e-4450.89Adenylate kinase OS=Bordetella pertussis GN=adk PE... [more]
KAD_HAHCH7.977e-4450.89Adenylate kinase OS=Hahella chejuensis (strain KCT... [more]
KAD_PSEAE1.042e-4352.66Adenylate kinase OS=Pseudomonas aeruginosa GN=adk ... [more]
KAD_PSEAB1.042e-4352.66Adenylate kinase OS=Pseudomonas aeruginosa (strain... [more]
KAD_PSEA81.042e-4352.66Adenylate kinase OS=Pseudomonas aeruginosa (strain... [more]
KAD_PSEA71.042e-4352.66Adenylate kinase OS=Pseudomonas aeruginosa (strain... [more]

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Properties
Property NameValue
Genbank descriptionC34103F09EF PostHarvP1 Citrus clementina cDNA clone C34103F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931302 ID=FC931302; Name=FC931302; organism=Citrus clementina; type=EST; length=725bp
GGTCTACAGTCTTTTGCTTCCACCTCTTCCCTCCTACAGTTCACAATGGC
TCCCATCACTGAAGAGGCTGTCTCCGGTCTGAAGAACGCCATCCACCAGC
TGGAGGCAAAGGTGTCCGAGCTTGAGAGCCGTCTTGCCAATGGCGGCAAG
CCCAAGTCCGCTGCCGAGCAGATGCGCATCATCCTGATGGGCCCTCCTGG
TGCAGGCAAGGGTACTCAAGCCCCGAACCTTAAGGAAAAGTACTGCGCAT
GCCACCTGGCCACCGGTGACATGCTGCGGTCTCAGGTCGCGAAGAAGACC
GATCTTGGAAAGGAAGCCAAGAAGATCATGGACCAGGGTGGTCTCGTTAG
CGATGAGATCATGGTCAACATGATCAAGAGCGAGCTCGACAACAACTCAG
AGTGCAAGAACGGTTTCATTCTGGATGGTTTCCCCCGGACGGTTGCGCAG
GCCGAGCGTCTCGATGACATGCTCGTCGCTCGTAATCAGAAGCTCCAGCA
CGCCGTTGAGCTGCAGATTGACGACTCTCTGCTGGTGGCTCGTATCACCG
GCCGCCTGGTCCACCCTGCCTCTGGCCGCTCGTACCACAAGATCTTCAAC
CCGCCCAAGGTTGACATGAAGGACGACATCTCCGGAGAGCCGCTGATCCA
GCGTTCCGATGACAATGCCGAAACCCTCACCAGCGTCTGGCTACTTACAC
GCCCAGACCACCCTGTCGTCGACTA
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