FC931305

Overview
NameFC931305
Unique NameFC931305
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: AL3B1_BOVIN (Aldehyde dehydrogenase family 3 member B1 OS=Bos taurus GN=ALDH3B1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.158e-35
Identity = 82/194 (42.27%), Postives = 120/194 (61.86%), Query Frame = 2
Query:  161 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            ++ LR  F SG+T+   +R +QLK L + L E +  + +AL QDL K   E+ + E+++ +  I  AL+ L+ WM  EK   ++ T   SA I  EPFG+VLI+SPWNYP  LSL P+VGA+AAGN +VLKPSE++  +  +LA+++  Y+D S   VV G   ET  LL+     + +    +V +IVM AAA
Sbjct:    8 LQRLREAFVSGRTRPAEFRDAQLKGLSRFLRENKQLLQEALAQDLHKSAFEAEVSEISISQNEINLALRNLRTWMKDEKVSKNLATQLDSAFIRKEPFGLVLILSPWNYPLNLSLGPLVGALAAGNCVVLKPSEISKNTEKVLAEVLPRYLDQSCFAVVLGGPQETGRLLEHKFDYIFFTGNPQVGKIVMTAAA 201          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: AL3A1_RAT (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 3.158e-35
Identity = 86/194 (44.33%), Postives = 117/194 (60.31%), Query Frame = 2
Query:  161 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            VK  R  F SGKT+S  +R+ QL++L +M+NE    I  AL  DL K E  S   EVA +   + + +KEL  W   E    +  T      I  EP GVVL+I  WNYPF L++ P+VGA+AAGNA++LKPSEV+   + LLA L+ +YMD +   VV+G V ET+ LL +   +++Y     V +IVMAAAA
Sbjct:    8 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAA 201          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: AL3A2_MOUSE (Fatty aldehyde dehydrogenase OS=Mus musculus GN=Aldh3a2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 80/194 (41.24%), Postives = 120/194 (61.86%), Query Frame = 2
Query:  161 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            V  LR  F SG+++   +R+ QL++L +M+ ERE +I+ A+  DL K EL +  +EV  +   I   L  L    +   AK ++ T    A + PEP GVVLII  WNYPF+L++ P+VGAIAAGNA ++KPSE++  ++ +LA+L+ +Y+D     +V G + ET+ LL Q   ++LY     V +IVM AAA
Sbjct:    5 VLRLRQAFRSGRSRLLRFRLQQLEALRRMVQEREKEILAAIAADLSKSELNAYSHEVITILGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPEPLGVVLIIGAWNYPFVLTMQPLVGAIAAGNAAIVKPSELSENTAKILAELLPQYLDQDLYAIVNGGIPETTELLKQRFDHILYTGNTAVGKIVMEAAA 198          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: AL3B1_HUMAN (Aldehyde dehydrogenase family 3 member B1 OS=Homo sapiens GN=ALDH3B1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.491e-34
Identity = 82/194 (42.27%), Postives = 120/194 (61.86%), Query Frame = 2
Query:  161 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            ++ LR  F +G+T+   +R +QL+ L + L E +  + DAL QDL K   ES + EVA+ +  +  AL+ L+ WM  E+   ++ T   SA I  EPFG+VLII+PWNYP  L+L P+VGA+AAGN +VLKPSE++     +LA+++ +Y+D S   VV G   ET  LL+     + +    RV +IVM AAA
Sbjct:    8 LRRLREAFHAGRTRPAEFRAAQLQGLGRFLQENKQLLHDALAQDLHKSAFESEVSEVAISQGEVTLALRNLRAWMKDERVPKNLATQLDSAFIRKEPFGLVLIIAPWNYPLNLTLVPLVGALAAGNCVVLKPSEISKNVEKILAEVLPQYVDQSCFAVVLGGPQETGQLLEHRFDYIFFTGSPRVGKIVMTAAA 201          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: ALDH2_BACSU (Probable aldehyde dehydrogenase ywdH OS=Bacillus subtilis GN=ywdH PE=3 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.327e-33
Identity = 75/194 (38.66%), Postives = 116/194 (59.79%), Query Frame = 2
Query:  161 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            + + +  FA+G T+    R++ L+ L + +   E D++ AL QDL K E E+   E+ ++   I   +K L+ W  P++ KT +T   S + I+PEP+G VL+I+PWNYP  L+L P++GAIAAGN +VLKPSE  PA S++L+KL+        + + EG    ++ALL Q    + +     V +IVM AAA
Sbjct:    8 ISKHKAYFAAGHTRPLESRLNILRKLKQAVRTHEADLIAALYQDLHKSEQEAYSTEIGIVLEEISFVMKRLRKWSKPKRVKTPLTHLGSKSIIIPEPYGTVLVIAPWNYPLQLALSPLIGAIAAGNTVVLKPSEYTPAVSAILSKLISSVFPTDYVAMAEGGPDVSTALLQQPFDYIFFTGSVAVGKIVMEAAA 201          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: AL3A1_HUMAN (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Homo sapiens GN=ALDH3A1 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.327e-33
Identity = 78/194 (40.21%), Postives = 118/194 (60.82%), Query Frame = 2
Query:  161 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            VK  R  F+SG+T+   +R+ QL++L +++ E+E ++V AL  DL K E  +   EV  +   I+  +++L  W   E  + +  T      I  EP GVVL+I  WNYPF L++ P+VGAIAAGNA+VLKPSE++   +SLLA ++ +Y+D     V+ G V ET+ LL +   ++LY     V +I+M AAA
Sbjct:    8 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAA 201          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: AL3A1_CANFA (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Canis familiaris GN=ALDH3A1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.042e-33
Identity = 76/194 (39.18%), Postives = 115/194 (59.28%), Query Frame = 2
Query:  161 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            V+  R  F SGKT+   +R+ QL++L +M+ E E D+  AL  DL K E  +   EV  +   I+  +K+L  W   E  + +  T      I  EP GVVLII  WNYPF +++ P+VGAIAAGNA+V+KPSE++   ++LLA ++ +Y+D     V+ G + ET+ LL +   ++LY     V +++M AAA
Sbjct:    8 VQRARAAFNSGKTRPLQFRIQQLEALRRMIKEHEKDLAGALTADLHKNEWNAYYEEVVYVLEEIEYMIKKLPEWAADEPVEKTPQTQQDECYIHSEPLGVVLIIGTWNYPFTVTIQPMVGAIAAGNAVVIKPSELSENMANLLATIIPQYLDRDLYPVISGGIPETTELLKERFDHILYTGNTAVGKVIMMAAA 201          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: AL3A1_MOUSE (Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus GN=Aldh3a1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.123e-32
Identity = 85/197 (43.15%), Postives = 113/197 (57.36%), Query Frame = 2
Query:  152 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            S  V   R  F SGKT+   +RV QL++L +M+NE    I  AL  +L K E  S   EVA +   I   +K L  W   E    +  T      I  EP GVVL+I  WNYPF L++ P+VGAIAAGNA+VLKPSEV+   + LL+ L+ +YMD     V++G V ET+ LL +   +++Y     V +IVMAAAA
Sbjct:    5 SSIVNRARDAFNSGKTRPLQFRVEQLEALQRMINENLKGISKALASNLRKNEWTSYYEEVAHVLDEIDFTIKGLSDWAEDEPVGKTRQTQEDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAIAAGNAVVLKPSEVSDHMADLLSTLIPQYMDKDLYPVIKGGVPETTELLKEKFDHIMYTGSTAVGKIVMAAAA 201          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: ALDH3_DICDI (Aldehyde dehydrogenase family 3 comG OS=Dictyostelium discoideum GN=comG PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.839e-29
Identity = 74/198 (37.37%), Postives = 113/198 (57.07%), Query Frame = 2
Query:  152 SLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRV-VEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            S+  K LR  F S KT+   WR SQLK++ KM++E + +I  A+++DL K E E    E+ +++T +   +  L+ W   EK  + +   P+S+ I+ EP GVVLI+SPWNYP  L+L P++GAIA GN  +LK S  +   S LL  L+ +Y+D        EG     + LL+    ++ +    +V +IV  AAA
Sbjct:   12 SVISKNLRKVFLSQKTRKIDWRYSQLKAIKKMMSENKDNITAAVKKDLGKHEFEIHQTEIVMIQTELDETISHLESWNKTEKVYSPLHFKPASSYILKEPLGVVLIMSPWNYPVNLALIPLIGAIAGGNCALLKLSRHSYNISKLLHGLLTKYLDPECFEFDCEGGAPYITELLEYKWDHIFFTGSVKVGKIVYQAAA 209          
BLAST of FC931305 vs. ExPASy Swiss-Prot
Match: ALDH_PSEOL (Aldehyde dehydrogenase OS=Pseudomonas oleovorans GN=alkH PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.378e-28
Identity = 74/216 (34.26%), Postives = 119/216 (55.09%), Query Frame = 2
Query:   95 MGSEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQSGINMLYR-QFRVARIVMAAAA 739
            + S  +T    EVF+ +  +   +  RG F   +      R++ L  L + +  REP+I+ AL  D  KP  E  + E+  +   I  A + LK WM P + + +++   + A +  EP GV LII+PWNYPF LS  P+V A+AAGN++V+KPSE+ P +++L+  +V E   +  + VVEG  A +  LL     ++ +    RV ++VM AA+
Sbjct:   10 LNSSADTHSALEVFNLQKVASSAR--RGKFGIAE------RIAALNLLKETIQRREPEIIAALAADFRKPASEVKLTEIFPVLQEINHAKRNLKDWMKPRRVRAALSVAGTRAGLRYEPKGVCLIIAPWNYPFNLSFGPLVSALAAGNSVVIKPSELTPHTATLIGSIVREAFSVDLVAVVEGDAAVSQELLALPFDHIFFTGSPRVGKLVMEAAS 217          
The following BLAST results are available for this feature:
BLAST of FC931305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
AL3B1_BOVIN3.158e-3542.27Aldehyde dehydrogenase family 3 member B1 OS=Bos t... [more]
AL3A1_RAT3.158e-3544.33Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A2_MOUSE2.673e-3441.24Fatty aldehyde dehydrogenase OS=Mus musculus GN=Al... [more]
AL3B1_HUMAN3.491e-3442.27Aldehyde dehydrogenase family 3 member B1 OS=Homo ... [more]
ALDH2_BACSU1.327e-3338.66Probable aldehyde dehydrogenase ywdH OS=Bacillus s... [more]
AL3A1_HUMAN1.327e-3340.21Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A1_CANFA5.042e-3339.18Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
AL3A1_MOUSE1.123e-3243.15Aldehyde dehydrogenase, dimeric NADP-preferring OS... [more]
ALDH3_DICDI9.839e-2937.37Aldehyde dehydrogenase family 3 comG OS=Dictyostel... [more]
ALDH_PSEOL6.378e-2834.26Aldehyde dehydrogenase OS=Pseudomonas oleovorans G... [more]

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Properties
Property NameValue
Genbank descriptionC34103F12EF PostHarvP1 Citrus clementina cDNA clone C34103F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931305 ID=FC931305; Name=FC931305; organism=Citrus clementina; type=EST; length=741bp
GGACATCATTTTATTCGTCAGCATTGTTTGTAGCCGAAGCAAAAAAAACA
GAATTCCAAAATCCATCCGTCCTTCTCTCGCTTTTTGAATTGCAATGGGG
AGTGAGGAGGAGACGAAGAAGAAGAATGAGGTGTTCGATGCGGAGGCGGC
GAGCTTGTTCGTGAAGGAGCTGAGAGGAACTTTTGCGTCTGGAAAAACGA
AGAGCTACGGATGGAGAGTGTCTCAGTTGAAGAGTTTGATGAAGATGCTC
AACGAGCGCGAGCCGGACATCGTCGACGCTCTTCGTCAAGATCTCGATAA
GCCGGAACTTGAATCCTCCATTTACGAGGTAGCATTGTTGAAGACTTCTA
TCAAGTCAGCACTCAAGGAACTAAAACACTGGATGACACCAGAGAAGGCT
AAAACTTCAATTACAACTTTTCCTTCATCAGCTGAAATAGTGCCAGAACC
ATTTGGTGTTGTATTAATCATCTCACCATGGAATTATCCTTTCTTGTTGT
CTCTCGATCCAGTTGTTGGGGCTATTGCAGCTGGTAATGCTCTGGTTCTA
AAGCCATCTGAAGTTGCTCCAGCATCGTCTTCATTGCTTGCAAAACTAGT
TGGTGAATATATGGATTTGTCTTCCATAAGGGTTGTTGAAGGGGCAGTTG
CTGAAACGTCTGCACTGCTTGATCAAAGTGGGATAAATATGTTATACAGG
CAATTCAGAGTTGCACGCATTGTGATGGCTGCAGCTGCAAG
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