FC931354

Overview
NameFC931354
Unique NameFC931354
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: CHI1_RHIOL (Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.611e-27
Identity = 68/171 (39.77%), Postives = 92/171 (53.80%), Query Frame = 3
Query:  165 GKYAYVNIAFLNKFGNGQTPEINLAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLT-AAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 656
            G+   V ++FL+ F  G TPEINL+  C      N     C  V   IK CQ +G+KV+                  +  A  +WN F GG+S +RP G AV+DG+D DIE G++  +   A F++A   +    +L  AAPQCPFPD  LG+ LN+  FDYV VQFYN +
Sbjct:   56 GQVDAVLLSFLHVFNVGGTPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGSSDTRPFGDAVIDGVDLDIEGGASTGY---AAFVNALRQKFSSNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNNY 223          

HSP 2 Score: 23.0978 bits (48), Expect = 4.611e-27
Identity = 13/49 (26.53%), Postives = 23/49 (46.94%), Query Frame = 2
Query:   47 TFVSLLVTLSL----IKASQGAGG--IAIYWGQNGNEGTLTSTCARQIC 175
            TF+ + ++  L    ++A+  + G  +  YWGQN   G+ T       C
Sbjct:    5 TFLGMAISAFLASTGVQAAWSSNGPNVMYYWGQNSAGGSNTQASLGTYC 53          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: CHI2_RHIOL (Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.438e-26
Identity = 67/171 (39.18%), Postives = 89/171 (52.05%), Query Frame = 3
Query:  165 GKYAYVNIAFLNKFGNGQTPEINLAGHC------NPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGKKVYLT-AAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 656
            G+   V ++FL+ F  G  PEINL+  C      N     C  V   IK CQ +G+KV+                  +  A  +WN F GG S +RP G AV+DG+D DIE GS+  +     F++A   +    +L  AAPQCPFPD  LG+ LN+  FDYV VQFYN +
Sbjct:   56 GQVDAVLLSFLHVFNVGGIPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGNSDTRPFGDAVIDGVDLDIEGGSSTGY---VAFVNALRQKFSSNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNNY 223          

HSP 2 Score: 22.3274 bits (46), Expect = 6.438e-26
Identity = 13/49 (26.53%), Postives = 23/49 (46.94%), Query Frame = 2
Query:   47 TFVSLLVTLSL----IKASQGAGG--IAIYWGQNGNEGTLTSTCARQIC 175
            TF+ + ++  L    ++A+  + G  +  YWGQN   G+ T       C
Sbjct:    5 TFLGMAISAFLASTGVQAAWSSHGPNVMYYWGQNSAGGSNTQASLGTYC 53          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: XIP2_ORYSJ (Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.390e-24
Identity = 68/167 (40.72%), Postives = 91/167 (54.49%), Query Frame = 3
Query:  165 GKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSS--SRPLGA-AVLDGIDFDIEQGSTLHWDDLARFLSAYSS--RGK-KVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFY 647
            G+Y  V I F N FG+G+   ++++GH   A G        IK CQSRGI V+                 A +VAD LWN +LGG  +  +RP G  A +DGIDF I+QG   H+DDLAR L  Y+   RG+  V LTA  +C +PD  L  AL TG+F  + V+ +
Sbjct:   52 GRYTTVIITFYNAFGHGRY-SLDISGHPLAAVGA------DIKHCQSRGITVLLSIGGQGGAYSLPTNASAADVADNLWNAYLGGHRAGVARPFGDDAAVDGIDFFIDQGGADHYDDLARRLDGYNKYYRGRVGVLLTATTRCSYPDHRLEKALATGVFARIHVRMF 211          

HSP 2 Score: 30.0314 bits (66), Expect = 3.390e-24
Identity = 13/39 (33.33%), Postives = 22/39 (56.41%), Query Frame = 2
Query:   44 ATFVSLLVTLSLIKASQGAGGIAIYWGQNGNEGTLTSTC 160
            A   +LL+  +   A+    G+A+YWG++  EG+L   C
Sbjct:   11 AAAAALLLLAAPPPATADDPGLAVYWGRHKEEGSLREAC 49          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: XIP1_ORYSJ (Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.983e-23
Identity = 64/167 (38.32%), Postives = 88/167 (52.69%), Query Frame = 3
Query:  165 GKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS--RPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRGK---KVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 650
            G Y  V I+F + FG+G+    +L+GH        RV+   IK CQS+ I V                  A +VAD +WN  + G      RP G A +DGIDF I+QG+  H+DDLAR L AY+   +    V LTA  +C FPD  +  AL+T LF+ + V+FY+
Sbjct:   56 GLYTTVVISFYSVFGHGRYWG-DLSGH------DLRVIGADIKHCQSKNIFVFLSIGGAGKDYSLPTSKSAADVADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPDHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYD 215          

HSP 2 Score: 32.7278 bits (73), Expect = 7.983e-23
Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:   86 ASQGAGGIAIYWGQNGNEGTLTSTC 160
            A+   G + ++WG+N NEGTL  TC
Sbjct:   29 AAGKTGQMTVFWGRNKNEGTLKETC 53          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: CHI1_CANAL (Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 6.499e-22
Identity = 56/162 (34.57%), Postives = 78/162 (48.15%), Query Frame = 3
Query:  186 IAFLNKFGNGQTPEINLAGHCNPAAGG----CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 656
            ++FL+ F N     +N A  C+         C  +   IKSCQ +G  ++                +A   A  LWN F GG  S RP   A++DG DFDIE      +  LA  L  Y S G K  YL+AAPQCP+PD  +G  ++    D+ ++QFYN +
Sbjct:   49 LSFLDGFPN---LSLNFANQCSGTFSSGLAHCSQIGSDIKSCQQQGKTILLSLGGATGNYGFSSDSEAVQFAGTLWNKFGGGKDSERPFDDAIVDGFDFDIENKDQTGYAALATQLRKYFSTGTKSYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNNY 207          

HSP 2 Score: 28.4906 bits (62), Expect = 6.499e-22
Identity = 15/36 (41.67%), Postives = 19/36 (52.78%), Query Frame = 2
Query:   62 LVTLSLIKASQGAGGIAIYWGQN--GNEGTLTSTCA 163
            L+ L  I     A  IA YWGQN  G++ TL   C+
Sbjct:    5 LIILLAISIVASASNIAAYWGQNAGGDQQTLGDYCS 40          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: CHIT_YEAST (Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.169e-20
Identity = 57/163 (34.97%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  186 IAFLNKFGNGQTPEINLAGHCNPAAGG----CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS-RPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSRG-KKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 656
            ++FLN+F    T  +N A  C+         C  +++ I++CQS G KV+                 A+  A  LW+ F  GT +S RP  +AV+DG DFDIE  + + +  LA  L    + G K+ YL+AAPQCP+PD  +G  L     D+ ++QFYN +
Sbjct:   58 LSFLNQF---PTLGLNFANACSDTFSDGLLHCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENADIDFAFIQFYNNY 217          

HSP 2 Score: 24.6386 bits (52), Expect = 1.169e-20
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 2
Query:  107 IAIYWGQN--GNEGTLTSTC 160
            IA+YWGQN  G + +L + C
Sbjct:   29 IAVYWGQNSAGTQESLATYC 48          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: CHI2_CANAL (Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.519e-20
Identity = 59/165 (35.76%), Postives = 79/165 (47.88%), Query Frame = 3
Query:  180 VNIAFLNKFGNGQTPEINLAGHC-NPAAGG---CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLARFLSAYSSR--GKKVYLTAAPQCPFPDRFLGAALNTGLFDYVWVQFYNTH 656
            V ++FLN F +     +N A  C N    G   C  +   IK+CQS G  V+                 A   AD LWN F  G    RP   AV+DG DFDIE G    + +LA  L    ++   K  +L+AAPQCP+PD  LG  L+    D+ ++QFYN +
Sbjct:   52 VLLSFLNLFPDPLN--VNFANQCGNTFESGLLHCSQIGADIKTCQSLGKTVLLSLGGGVGDYGFSDVASATKFADTLWNKFGAGEDPERPFDDAVVDGFDFDIEHGGATGYPELATALRGKFAKDTSKNYFLSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNNY 214          

HSP 2 Score: 25.409 bits (54), Expect = 1.519e-20
Identity = 12/34 (35.29%), Postives = 19/34 (55.88%), Query Frame = 2
Query:   47 TFVSLLVTLSLIKASQGAGG--IAIYWGQNGNEG 142
            +F SLL    +  ++  +    +A+YWGQNG  G
Sbjct:    3 SFKSLLAAAVVASSALASASNQVALYWGQNGAGG 36          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: CONB_CANEN (Concanavalin B OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.384e-20
Identity = 62/164 (37.80%), Postives = 84/164 (51.22%), Query Frame = 3
Query:  171 YAYVNIAFLNKFG-NGQTPEINLAGHCNPAAGG-CRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQG-STLHWDDLARFLSAYSSRGKKVYL-TAAPQCPFPDRFLGAALNTGLFDYVWVQFYN 650
            Y  V I+FL+KFG   + PE+ L G C P+ G  C  +   IK CQ  G+KV                  AK++A+YL   FL       PLG   LDGI FDI++    L+WD+L   L       +  +L +AAP C  PD +L  A+ T  FDY++V+FYN
Sbjct:   53 YKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFLESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG-PLGKVALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYN 215          

HSP 2 Score: 21.557 bits (44), Expect = 3.384e-20
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  659 CQYSSGNTQNL 691
            CQYS+GN Q +
Sbjct:  219 CQYSTGNIQRI 229          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: XIP1_WHEAT (Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.261e-19
Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 3
Query:  165 GKYAYVNIAFLNKFGNGQTPEINLAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSS--RPLGAAVLDGIDFDIEQGSTL-HWDDLARFLSAYSSR---GKKVYLTAAPQCPFPD-RFLGAALNTGLFDYVWVQFYNT 653
            G Y  V ++FL+ FG      ++L+GH   + G        IK CQS+G+ V                  A ++ D+LWN++ GG+  S  RP G A LDG+D  +E G+    +D LA  L+ ++ R   GK ++LTA  +C +P    +G AL TG+F+ V V+ Y +
Sbjct:   58 GMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA------DIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES 221          

HSP 2 Score: 31.5722 bits (70), Expect = 1.261e-19
Identity = 15/50 (30.00%), Postives = 24/50 (48.00%), Query Frame = 2
Query:   23 ARNSPAIATFVSLLVTLSLIKASQGAGG----IAIYWGQNGNEGTLTSTC 160
            AR    +   +S+   L L   +  AGG    + ++WG+N  EG+L   C
Sbjct:    6 ARRPACLLALLSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREAC 55          
BLAST of FC931354 vs. ExPASy Swiss-Prot
Match: CHLY_PARTH (Bifunctional chitinase/lysozyme (Fragment) OS=Parthenocissus quinquefolia PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 3.789e-15
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 3
Query:  165 GKYAYVNIAFLNKFGNGQTPEINLA 239
            GKY+YVNIAFLNKFGNGQTPEINLA
Sbjct:   23 GKYSYVNIAFLNKFGNGQTPEINLA 47          

HSP 2 Score: 46.9802 bits (110), Expect = 3.789e-15
Identity = 19/20 (95.00%), Postives = 19/20 (95.00%), Query Frame = 2
Query:  101 GGIAIYWGQNGNEGTLTSTC 160
            GGIAIYWGQNGNEGTLT TC
Sbjct:    1 GGIAIYWGQNGNEGTLTQTC 20          
The following BLAST results are available for this feature:
BLAST of FC931354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CHI1_RHIOL4.611e-2739.77Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 S... [more]
CHI2_RHIOL6.438e-2639.18Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 S... [more]
XIP2_ORYSJ3.390e-2440.72Xylanase inhibitor protein 2 OS=Oryza sativa subsp... [more]
XIP1_ORYSJ7.983e-2338.32Xylanase inhibitor protein 1 OS=Oryza sativa subsp... [more]
CHI1_CANAL6.499e-2234.57Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2[more]
CHIT_YEAST1.169e-2034.97Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 ... [more]
CHI2_CANAL1.519e-2035.76Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1[more]
CONB_CANEN3.384e-2037.80Concanavalin B OS=Canavalia ensiformis PE=1 SV=1[more]
XIP1_WHEAT1.261e-1933.53Xylanase inhibitor protein 1 OS=Triticum aestivum ... [more]
CHLY_PARTH3.789e-1596.00Bifunctional chitinase/lysozyme (Fragment) OS=Part... [more]

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Properties
Property NameValue
Genbank descriptionC34104C01EF PostHarvP1 Citrus clementina cDNA clone C34104C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931354 ID=FC931354; Name=FC931354; organism=Citrus clementina; type=EST; length=719bp
GACTTGCATAATTGCAGAAATGGCCAGAAACTCTCCAGCAATAGCAACAT
TCGTCTCCCTGCTGGTCACTCTGTCATTGATCAAAGCCTCTCAAGGCGCC
GGCGGCATCGCAATCTATTGGGGCCAAAACGGCAACGAGGGTACCCTCAC
TTCAACCTGTGCCAGGCAAATATGCTTATGTCAACATAGCTTTCCTGAAC
AAGTTTGGCAACGGCCAGACCCCTGAAATTAACCTTGCCGGCCACTGCAA
CCCTGCAGCCGGTGGCTGCAGAGTCGTCAGCGACGCAATCAAGAGTTGTC
AGAGCCGAGGCATCAAAGTTATGCTTTCCCTCGGAGGTGGGGTTGGTAGC
TACTCTTTGGCTTCTGTAGCTGATGCCAAGAATGTAGCTGATTACTTGTG
GAACAATTTCTTGGGGGGAACATCAAGTTCAAGGCCATTAGGTGCTGCTG
TGTTGGACGGTATTGATTTTGATATTGAGCAAGGCTCAACTTTGCATTGG
GATGACCTTGCAAGGTTTCTATCAGCATATAGCAGCCGTGGCAAGAAAGT
TTACTTAACAGCAGCTCCCCAGTGCCCATTTCCTGATAGGTTTCTGGGTG
CTGCTTTGAACACGGGGCTTTTTGATTATGTATGGGTTCAGTTTTACAAC
ACCCACCTTGTCAGTATAGTTCAGGAAATACCCAGAATCTTATAAGTCAT
TTACAGATGGGCTTCATCA
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