FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.060e-26
Identity = 67/165 (40.61%), Postives = 98/165 (59.39%), Query Frame = 2
Query:  218 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            S   ++  T+ F  + +IG G +G VY G L SG   A+K+L   S Q  EEF  +  +VS+L+H+N V+LLG+C++G  ++L YEF  N SL   L        A+ G  L W +R  I  G A+G+ YLH+ +   IIHRD+K+SN+L+  D   KIADF ++
Sbjct:  334 SFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFL-----FDPAKQGE-LDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMA 492          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.060e-26
Identity = 70/188 (37.23%), Postives = 110/188 (58.51%), Query Frame = 2
Query:  191 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            +Q   + + +  ELK  T NF  ++++GEG +G V+ G +           +G   A+KKL+    Q  +E+LA+V+ + +  H N V+L+GYC++   R+L YEF   GSL + L  R      QP   LSW  R+K+A+GAAKGL +LH  A+  +I+RD K+SN+L+  +  AK++DF L+   P
Sbjct:   49 LQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSY--FQP---LSWTLRLKVALGAAKGLAFLH-NAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGP 230          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 65/166 (39.16%), Postives = 95/166 (57.23%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            E+ ++T NF    ++GEG +G V +G +      A+K L  +S Q  + F A+V ++ R+ H N V L+GYC +     L YEF   G L   L G+ G      G  ++W  R++IA+ AA GLEYLH    P I+HRDIK++N+L+ +   AK+ADF LS   P
Sbjct:  573 EVIKMTNNF--QRVVGEGGFGVVCHGTINGSEQVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSG------GSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFP 730          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 67/163 (41.10%), Postives = 95/163 (58.28%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYG-ILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +L + TE F  N ++G G +G VY G I  S    A+KK+   S Q   EF+A++  + RL+H+N V L G+C      +L Y++  NGSL  +L+     K  + G VLSW  R +IA G A GL YLHE+ +  +IHRD+K SNVLI  D   ++ DF L+
Sbjct:  355 DLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYS----KPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLA 513          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 65/163 (39.88%), Postives = 99/163 (60.74%), Query Frame = 2
Query:  230 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV--LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            L+  T+ F  N  +G+G +G VY G+L +    A+K+L + S Q  +EF  +V +V++L+H+N V+LLG+C++   ++L YEF  N SL+  L G K      P     L W++R  I  G  +GL YLH+ +   IIHRDIK+SN+L+  D   KIADF ++
Sbjct:  314 LEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMA 476          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 69/190 (36.32%), Postives = 104/190 (54.74%), Query Frame = 2
Query:  143 AYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +Y   +    G   +  Q ++   I V      TENF     +G+G +G VY G L +G   A+K+L   S+Q  +EF  +V +V++L+H N V+LLGYC++   ++L YEF  N SL   L      K  Q    L W +R  I  G  +G+ YLH+ +   IIHRD+K+SN+L+  D + KIADF ++
Sbjct:  336 SYQEIDLDQSGITTLHFQQLDFKTIEV-----ATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDP--TKQGQ----LDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMA 514          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 64/175 (36.57%), Postives = 98/175 (56.00%), Query Frame = 2
Query:  200 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            I+    + +++KE T  +  + ++G+G    VY GIL      AIKK         E+F+ +V ++S++ H N V+LLG C++    +L YEF + GSL D LHG   V        L+W+ R++IA+  A  + YLH  A   IIHRDIK+ N+L+ ++  AK+ADF  S   P
Sbjct:   91 IDFKIFTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSS------LTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKP 259          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 70/184 (38.04%), Postives = 103/184 (55.98%), Query Frame = 2
Query:  236 EITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-------------DASKQP---DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADF------DLSNQAP 721
            EI E+   + +IG G+ G+VY  +L +G   A+K+L             +   +P   DE F A+V  + +++H+N V+L   C     ++L YE+  NGSL D+LH  KG        +L WQ R KI + AA+GL YLH  + P I+HRDIKS+N+LI  D  A++ADF      DL+ +AP
Sbjct:  671 EILESLDEDNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKG-------GMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAP 847          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 68/166 (40.96%), Postives = 96/166 (57.83%), Query Frame = 2
Query:  230 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            LK+ T NF  +  +G G YG V+ G L  G   AIK+L  S K+P +E   ++ ++SR +H+N V+LLG C    +  + YEF +N SL  IL   +  K       L W++R  I +G A+GLEYLHE     IIHRDIK+SN+L+      KI+DF L+   P+
Sbjct:  324 LKKATNNFNESCKLGVGGYGEVFKGTLSDGREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILFNPEKKK------ELDWKKRRTIILGTAEGLEYLHETC--KIIHRDIKASNILLDLKYKPKISDFGLAKFYPE 481          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 65/163 (39.88%), Postives = 98/163 (60.12%), Query Frame = 2
Query:  224 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQP-DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            + L++ T+ F    ++G+G  G V+ GIL +G   A+K+L  + +   EEF  +V+++S ++H+N V+LLG  ++G   +L YE+  N SL   L      K      VL+W QR+ I +G A+GL YLH  +   IIHRDIK+SNVL+ D    KIADF L+
Sbjct:  306 ETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSK------VLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLA 462          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK35_ARATH6.060e-2640.61Putative cysteine-rich receptor-like protein kinas... [more]
APK1B_ARATH6.060e-2637.23Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
PAM74_ARATH7.914e-2639.16Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH7.914e-2641.10Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK32_ARATH7.914e-2639.88Putative cysteine-rich receptor-like protein kinas... [more]
CRK12_ARATH7.914e-2636.32Putative cysteine-rich receptor-like protein kinas... [more]
WAKLS_ARATH1.034e-2536.57Putative wall-associated receptor kinase-like 16 O... [more]
HSL1_ARATH1.034e-2538.04Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
CRK43_ARATH1.034e-2540.96Putative cysteine-rich receptor-like protein kinas... [more]
CRK42_ARATH1.034e-2539.88Cysteine-rich receptor-like protein kinase 42 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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