FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 2
Query:  146 YHASEAAPKGAQAVKVQPIEVPAISV--DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            Y  S +  +   ++ +   E P + V   ++ E T++F    +IG+G +G VY   L      A+KKL  +K Q + EF+A++  + ++KH N V LLGYC     ++L YE+  NGSL   L  + G+       VL W +R+KIAVGAA+GL +LH    PHIIHRDIK+SN+L+  D   K+ADF L+
Sbjct:  880 YFLSGSRSREPLSINIAMFEQPLLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGML-----EVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLA 1065          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32
Identity = 72/162 (44.44%), Postives = 102/162 (62.96%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            EL+  T       +IGEG YG VY GIL  G   A+K L  ++ Q ++EF  +V ++ R++H+N V+LLGYCV+G  R+L Y+F  NG+L   +HG  G     P   L+W  R+ I +G AKGL YLHE  +P ++HRDIKSSN+L+     AK++DF L+
Sbjct:  146 ELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVG--DVSP---LTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLA 302          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.652e-32
Identity = 78/209 (37.32%), Postives = 116/209 (55.50%), Query Frame = 2
Query:  113 MVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK------KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            M +  +GT    HA +A                  S  EL   T NF     IG GS+G VY G L  G   AIK      K+   ++ +  F ++++ +SRL H++ V+L+GYC +   ++L Y++  NG+L+D LH +  V+      + SW+ R+KIA+ AA+G+EYLH  A P IIHRDIKSSN+L+  + VA+++DF LS   P
Sbjct:  465 MRRQRSGTSSMKHADKAEE---------------FSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVE-KHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGP 657          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.261e-31
Identity = 75/206 (36.41%), Postives = 118/206 (57.28%), Query Frame = 2
Query:  122 SSAGTDGAYHASEAAPKGAQAVKVQPIEVPAIS---------VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            S +G +G + ++     G        + +P IS         + +L+  T  F    ++GEG YG VY G L +G   A+KKL +   Q ++EF  +V  +  ++H+N V+LLGYC++G  R+L YE+ ++G+L   LHG     G      L+W+ R+KI  G A+ L YLHE  +P ++HRDIK+SN+LI D+  AK++DF L+
Sbjct:  131 SHSGEEGGFGSAGRQYGGGPVTASPLVGLPEISHLGWGHWFTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGN-----LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLA 331          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31
Identity = 73/177 (41.24%), Postives = 110/177 (62.15%), Query Frame = 2
Query:  218 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHA-AAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 742
            S+ E+K  T +F    +IG G +G VY G +  G    A+K+L+  S Q  +EF  ++ M+S+L+H + V L+GYC D    VL YE+  +G+L D L  R         P LSW++R++I +GAA+GL+YLH  A   IIHRDIK++N+L+ ++ VAK++DF LS   P  A++ H
Sbjct:  514 SIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASD----PPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTH 686          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31
Identity = 67/167 (40.12%), Postives = 106/167 (63.47%), Query Frame = 2
Query:  230 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 727
            +KE T++F  + +IG G +G+VY G+L+     A+K+    S+Q   EF  +V M+++ +H + V L+GYC + +  ++ YE+   G+L D L+           P LSW+QR++I VGAA+GL YLH  +   IIHRD+KS+N+L+ D+ +AK+ADF LS   PD+
Sbjct:  480 IKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYD------LDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDL 640          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31
Identity = 75/166 (45.18%), Postives = 102/166 (61.45%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +S+D++ + T +F    +IG G +G VY   L  G   AIK+L     Q D EF A+V  +SR +H N V LLGYC     ++L Y +  NGSL   LH +  V G    P L W+ R++IA GAA+GL YLH+  +PHI+HRDIKSSN+L+ D  VA +ADF L+
Sbjct:  731 LSLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEK--VDGP---PSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLA 891          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31
Identity = 68/171 (39.77%), Postives = 112/171 (65.50%), Query Frame = 2
Query:  218 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 727
            S+ E+K  T+NF  + +IG G +G+VY G++      A+KK +  S+Q   EF  ++ ++SRL+H++ V L+GYC +G    L Y++ + G+L + L+  K        P L+W++R++IA+GAA+GL YLH  A   IIHRD+K++N+L+ ++ VAK++DF LS   P+M
Sbjct:  506 SLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKK-------PQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNM 669          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.668e-31
Identity = 69/170 (40.59%), Postives = 106/170 (62.35%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            IS  EL+  T NF  + +IG G +G V+ G LK     A+K+    S+Q   EFL++++++S+++H + V L+GYC + +  +L YE+   G L   L+G          P LSW+QR+++ +GAA+GL YLH  +   IIHRDIKS+N+L+ ++ VAK+ADF LS   P
Sbjct:  477 ISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYG-------STNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGP 639          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.668e-31
Identity = 76/182 (41.76%), Postives = 105/182 (57.69%), Query Frame = 2
Query:  188 KVQPIEVPAISVDE-----LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            K  P  +P  SV       L++ TE+F    LIG G  G VY   L +G   A+KKLD   + +Q D EF+  V+ +  ++H N V+L+GYC +   R+L YE+ SNG+L D LH     K       LSW  RV +A+GAA+ LEYLHE  +P IIHR+ KS+NVL+ DD    ++D  L+
Sbjct:  459 KTSPKRLPLTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKK-----LSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLA 635          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EXS_ARATH7.390e-3239.27Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y1154_ARATH9.652e-3244.44Probable serine/threonine-protein kinase At1g01540... [more]
ACCR3_ARATH9.652e-3237.32Putative serine/threonine-protein kinase-like prot... [more]
Y2296_ARATH1.261e-3136.41Probable receptor-like protein kinase At2g42960 OS... [more]
Y5389_ARATH2.808e-3141.24Probable receptor-like protein kinase At5g38990 OS... [more]
Y2393_ARATH2.808e-3140.12Probable receptor-like protein kinase At2g39360 OS... [more]
PSKR1_DAUCA2.808e-3145.18Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
ANX1_ARATH2.808e-3139.77Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y5241_ARATH3.668e-3140.59Probable receptor-like protein kinase At5g24010 OS... [more]
SRF3_ARATH3.668e-3141.76Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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