FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31
Identity = 76/200 (38.00%), Postives = 118/200 (59.00%), Query Frame = 2
Query:  167 PKGAQAVKVQPIE-VPA-----ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHA-AAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH 742
            P G  +   +P + +PA      S+ E+K  T +F    +IG G +G VY G +  G    A+K+L+  S Q  +EF  ++ M+S+L+H + V L+GYC +    VL YE+  +G+L D L  R         P LSW++R++I +GAA+GL+YLH  A   IIHRDIK++N+L+ ++ V K++DF LS   P  A++ H
Sbjct:  484 PHGTDSTNTKPAKSLPADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSD----PPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTH 679          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31
Identity = 73/178 (41.01%), Postives = 106/178 (59.55%), Query Frame = 2
Query:  191 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK-KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            ++ + V   +++ +++ TE + T  LIGEG +G VY G L  G   A+K +   S Q   EF  +++++S ++HEN V LLGYC +   ++L Y F SNGSL D L+G      A    +L W  R+ IA+GAA+GL YLH      +IHRD+KSSN+L+     AK+ADF  S  AP
Sbjct:  578 IKSVSVKPFTLEYIEQATEQYKT--LIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGE-----ASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAP 748          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.171e-31
Identity = 69/164 (42.07%), Postives = 105/164 (64.02%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK-KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 715
            E+K  T NF    +IG GS+G VY G L  G   A+K + D ++   + F+ +V ++S+++H+N V   G+C +   ++L YE+ S GSL D L+G +  + +     L+W  R+K+AV AAKGL+YLH  ++P IIHRD+KSSN+L+  D  AK++DF LS Q
Sbjct:  600 EIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHS-----LNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQ 756          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.171e-31
Identity = 75/171 (43.86%), Postives = 103/171 (60.23%), Query Frame = 2
Query:  203 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV-LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            EV  +++ EL + T+NF    +IG G +G VY   L +G   A+KKL       ++EF A+V ++SR KHEN V L GYCV  ++R+L Y F  NGSL   LH          GP  L W +R+ I  GA+ GL Y+H+  +PHI+HRDIKSSN+L+  +  A +ADF LS
Sbjct:  787 EVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENP------EGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLS 951          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30
Identity = 71/184 (38.59%), Postives = 106/184 (57.61%), Query Frame = 2
Query:  179 QAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE---EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            +A  V P  V   +V +L+  T +F  + L+GEG++GRVY    + G   A+KK+D+S  P +   +F   VS ++ L HEN  +L GYC +    ++ YEF  NGSLHD LH        +    L W  RVKIA+G A+ LEYLHE   P I+H++IKS+N+L+  +    ++D  L++  P
Sbjct:  395 KAAVVVPSNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLH-----LAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLP 573          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.377e-30
Identity = 73/211 (34.60%), Postives = 120/211 (56.87%), Query Frame = 2
Query:   98 NGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 727
            N   ++  SS GT  + + +  A   + +       +P ++V   KE T +F  N  IG G +G+VY G L  G   A+K+ +  S+Q   EF  ++ M+S+ +H + V L+GYC +    +L YE+  NG+L   L+G   +        LSW+QR++I +G+A+GL YLH      +IHRD+KS+N+L+ ++ +AK+ADF LS   P++
Sbjct:  438 NSKTWIPLSSNGTTSSSNGTTLASIASNS----SYRIPLVAV---KEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLS-------LSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEI 634          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.377e-30
Identity = 73/166 (43.98%), Postives = 98/166 (59.04%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +SV+EL + T NF    +IG G +G VY      G  AA+K+L     Q + EF A+V  +SR +H+N V L GYC  G  R+L Y F  NGSL   LH R           L W  R+KIA GAA+GL YLH+  +P++IHRD+KSSN+L+ +   A +ADF L+
Sbjct:  742 LSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHER-----VDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLA 902          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.377e-30
Identity = 76/188 (40.43%), Postives = 105/188 (55.85%), Query Frame = 2
Query:  197 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-------------QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            P ++   S+DEL   T+ F     +G GS+G VY G+L  G   AIK+ + +                D  F+ ++  +SRL H+N V+LLG+  D   R+L YE+  NGSL D LH        Q  P LSWQ R+ IA+ AA+G++YLHE   P +IHRDIKSSN+L+     AK++DF LS   P
Sbjct:  425 PGQLMEFSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHN------PQFDP-LSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGP 605          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.055e-30
Identity = 73/178 (41.01%), Postives = 105/178 (58.99%), Query Frame = 2
Query:  191 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            ++ + V   +++ ++  TE + T  LIGEG +G VY G L  G   A+K   A S Q   EF  +++++S ++HEN V LLGYC +   ++L Y F SNGSL D L+G    +      +L W  R+ IA+GAA+GL YLH      +IHRD+KSSN+L+     AK+ADF  S  AP
Sbjct:  577 IKSVSVKPFTLEYIELATEKYKT--LIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKR-----KILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAP 747          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.296e-30
Identity = 73/179 (40.78%), Postives = 101/179 (56.42%), Query Frame = 2
Query:  197 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            PI     +V  L+  T +F    +IGEGS GRVY     +G   AIKK+D    S Q ++ FL  VS +SRL+H N V L GYC +   R+L YE+  NG+L D LH             L+W  RVK+A+G AK LEYLHE   P I+HR+ KS+N+L+ ++    ++D  L+   P+
Sbjct:  377 PITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTND-----DRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPN 550          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5900_ARATH4.790e-3138.00Putative receptor-like protein kinase At5g39000 OS... [more]
NORK_MEDTR4.790e-3141.01Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y5487_ARATH8.171e-3142.07Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH8.171e-3143.86Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
SRF7_ARATH1.820e-3038.59Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
Y5597_ARATH2.377e-3034.60Probable receptor-like protein kinase At5g59700 OS... [more]
PSKR2_ARATH2.377e-3043.98Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
ACCR4_ARATH2.377e-3040.43Serine/threonine-protein kinase-like protein CCR4 ... [more]
NORK_PEA4.055e-3041.01Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
SRF8_ARATH5.296e-3040.78Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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